医学 AI

Macular: a multi-scale simulation platform for the retina and the primary visual system

Macular：一种多尺度模拟平台用于视网膜和初级视觉系统

Bruno Cessac, Erwan Demairy, Jérôme Emonet, Evgenia Kartsaki, Thibaud Kloczko, Côme Le Breton, Nicolas Niclausse, Selma Souihel, Jean-Luc Szpyrka, Julien Wintz

专题命中 病理影像 ：pathology(abstract)；分类 q-bio

AI总结 Macular是一款用于视网膜和初级视觉系统的多尺度模拟平台，提供图形界面支持，允许用户无需编程即可测试视觉系统假设。

Comments 25 pages, 3 figures

Deep Multi-modal Breast Cancer Detection Network

深度多模态乳腺癌检测网络

Noor Ul Huda Shah, Tanveer Hussain, Amr Ahmed, Yonghuai Liu, Usman Ali, Ardhendu Behera

专题命中 病理影像 ：medical image(abstract)；分类 q-bio

AI总结 本文提出深度多模态乳腺癌检测网络，整合视觉与临床数据提升诊断准确率，实验显示在Mini-DDSM数据集上准确率提升至90.87%。

Comments The paper is withdrawn because we identified an error in the dataset splitting procedure used in the experiments for MMCDNET. The training/validation split was incorrectly implemented, leading to data leakage and invalid performance results

Geometric Modeling of Hippocampal Tau Deposition: A Surface-Based Framework for Covariate Analysis and Off-Target Contamination Detection

海马体tau沉积的几何建模：一种基于表面的协变量分析和脱靶污染检测框架

Liangkang Wang, Akhil Ambekar, Ani Eloyan

专题命中 病理影像 ：pathology(abstract)；分类 q-bio

AI总结 本文提出了一种基于表面的几何建模框架，用于分析海马体tau沉积的协变量效应和脱靶污染，揭示了不同亚型的tau动态特征。

PathGene: Benchmarking Driver Gene Mutations and Exon Prediction Using Multicenter Lung Cancer Histopathology Image Dataset

PathGene：利用多中心肺癌组织病理学图像数据集进行驱动基因突变和外显子预测的基准测试

Liangrui Pan, Qingchun Liang, Shen Zhao, Songqing Fan, Shaoliang Peng

专题命中 病理影像 ：pathology(abstract)；分类 q-bio

AI总结 PathGene通过多中心肺癌病理图像数据集，利用多实例学习方法提升驱动基因突变和外显子预测的准确性，助力精准肿瘤学发展。

Comments Withdrawn due to issues related to data permissions/ethics

Diversity Over Scale: Whole-Slide Image Variety Enables H&E Foundation Model Training with Fewer Patches

Christoph Bosch, John K. L. Wong, Martin Paulikat, Myroslav Zapukhlyak, Bharti Arora, Manasi Aichmüller-Ratnaparkhe, Jens Baumann, Shivani Karn, Rutuja Kamble, Swapnil Karnik, Bhushan Khedkar, Serey Vathana Chhut, Witali Aswolinskiy, Christian Aichmüller

专题命中 病理影像 ：pathology(abstract)；分类 q-bio

Attention-based ROI Discovery in 3D Tissue Images

Hossein Fathollahian, Siyuan Zhao, Nafiul Nipu, G. Elisabeta Marai

专题命中 病理影像 ：biomedical(abstract)；分类 q-bio

Comments 2 pages, 3 figures;

An in-silico integration of neurodevelopmental and dopaminergic views of schizophrenia

Xena Al-Hejji, Santina Duarte, Jose Guillermo Gomez Castro, Edgar Bermudez Contreras, Eric Chalmers

专题命中 病理影像 ：pathology(abstract)；分类 q-bio

ST2HE: A Cross-Platform Framework for Virtual Histology and Annotation of High-Resolution Spatial Transcriptomics Data

Zhentao Liu, Arun Das, Wen Meng, Yu-Chiao Chiu, Shou-Jiang Gao, Yufei Huang

专题命中 病理影像 ：pathology(abstract)；分类 q-bio

Comments 36 pages, 5 figures, 1 table

Depolarization block induction via slow NaV1.1 inactivation in Dravet syndrome

Louisiane Lemaire, Mathieu Desroches, Serafim Rodrigues, Fabien Campillo

专题命中 病理影像 ：pathology(abstract)；分类 q-bio

Journal ref Scientific Reports, 2025, vol. 15, no 1, p. 32749

Imaging Modalities-Based Classification for Lung Cancer Detection

Sajim Ahmed, Muhammad Zain Chaudhary, Muhammad Zohaib Chaudhary, Mahmoud Abbass, Ahmed Sherif, Mohammad Mahbubur Rahman Khan Mamun

机构 * School of Computing Sciences and Computer Engineering, University of Southern Mississippi, MS, USA（计算科学与计算机工程学院，密苏里州立大学） ； Electrical and Computer Engineering Department, Tennessee Technological University, TN, USA（电气与计算机工程系，田纳西技术大学） 纠错

专题命中 病理影像 ：CT(abstract)；分类 q-bio

Comments Accepted at ICMI 2025

How Easterners and Westerners perceive ADHD differently

Xing-Chan Lin

专题命中 病理影像 ：pathology(abstract)；分类 q-bio

Comments 7 pages, 1 figure

Rosette formations as symmetry-breaking events: theory and experiment

Mattia Miotto, Giorgio Gosti, Maria Rosito, Michela Dell'Omo, Viola Folli, Valeria de Turris, Giancarlo Ruocco, Alessandro Rosa, Matteo Paoluzzi

专题命中 病理影像 ：pathology(abstract)；分类 q-bio

Comments 14 pages, 7 figures

Integrative Prognostic Modeling of Breast Cancer Survival with Gene Expression and Clinical Data

Robert Amevor, Emmanuel Kubuafor, Dennis Baidoo, Junaidu Salifu, Koshali Muthunama Gonnage, Onyedikachi Joshua Okeke

专题命中 病理影像 ：diagnosis(abstract)；分类 q-bio

Comments 14 pages, 8 figures

Mathematical Validation of a Cancer Model

Marcela V. Reale, Gustavo Paccosi, David H. Margarit, Lilia Romanelli

专题命中 病理影像 ：diagnosis(abstract)；分类 q-bio

A complex network perspective on brain disease

David Papo, Javier M. Buldú

专题命中 病理影像 ：pathology(abstract)；分类 q-bio

Comments 26 pages, 3 figures

A Hybrid Mixture Approach for Clustering and Characterizing Cancer Data

Kazeem Kareem, Fan Dai

专题命中 病理影像 ：biomedical(abstract)；分类 q-bio

BraTS-PEDs: Results of the Multi-Consortium International Pediatric Brain Tumor Segmentation Challenge 2023

Anahita Fathi Kazerooni, Nastaran Khalili, Xinyang Liu, Debanjan Haldar, Zhifan Jiang, Anna Zapaishchykova, Julija Pavaine, Lubdha M. Shah, Blaise V. Jones, Nakul Sheth, Sanjay P. Prabhu, Aaron S. McAllister, Wenxin Tu, Khanak K. Nandolia, Andres F. Rodriguez, Ibraheem Salman Shaikh, Mariana Sanchez Montano, Hollie Anne Lai, Maruf Adewole, Jake Albrecht, Udunna Anazodo, Hannah Anderson, Syed Muhammed Anwar, Alejandro Aristizabal, Sina Bagheri, Ujjwal Baid, Timothy Bergquist, Austin J. Borja, Evan Calabrese, Verena Chung, Gian-Marco Conte, James Eddy, Ivan Ezhov, Ariana M. Familiar, Keyvan Farahani, Deep Gandhi, Anurag Gottipati, Shuvanjan Haldar, Juan Eugenio Iglesias, Anastasia Janas, Elaine Elaine, Alexandros Karargyris, Hasan Kassem, Neda Khalili, Florian Kofler, Dominic LaBella, Koen Van Leemput, Hongwei B. Li, Nazanin Maleki, Zeke Meier, Bjoern Menze, Ahmed W. Moawad, Sarthak Pati, Marie Piraud, Tina Poussaint, Zachary J. Reitman, Jeffrey D. Rudie, Rachit Saluja, MIcah Sheller, Russell Takeshi Shinohara, Karthik Viswanathan, Chunhao Wang, Benedikt Wiestler, Walter F. Wiggins, Christos Davatzikos, Phillip B. Storm, Miriam Bornhorst, Roger Packer, Trent Hummel, Peter de Blank, Lindsey Hoffman, Mariam Aboian, Ali Nabavizadeh, Jeffrey B. Ware, Benjamin H. Kann, Brian Rood, Adam Resnick, Spyridon Bakas, Arastoo Vossough, Marius George Linguraru

机构 * Center for Data-Driven Discovery in Biomedicine (D3b)（数据驱动生物医学发现中心） ； The Children’s Hospital of Philadelphia（费城儿童医院） ； Sheikh Zayed Institute for Pediatric Surgical Innovation（谢赫扎伊德儿童外科创新研究所） ； Children’s National Hospital（儿童国家医院） ； Department of Neurosurgery（神经外科部门） ； Dana-Farber Brigham Cancer Center & Boston Children’s Hospital（达纳-法伯布里弗癌症中心及波士顿儿童医院） ； Department of Paediatric Radiology（儿科放射科部门） ； University of Utah（犹他大学） ； Cincinnati Children’s Hospital Medical Center（辛辛那提儿童医学中心） ； Department of Radiology（放射科部门） ； Division of Neuroradiology, Department of Radiology, Boston Children’s Hospital, Harvard Medical School（神经放射科，放射科，波士顿儿童医院，哈佛医学院） ； College of Arts and Sciences, University of Pennsylvania（艺术与科学学院，宾夕法尼亚大学） ； Department of Diagnostic and Interventional Radiology, All India Institute of Medical Sciences（诊断与介入放射科，全印度医学科学院） ； Department of Diagnostic & Interventional Imaging, Neuroradiology section, The University of Texas Health at Houston, Texas, USA（诊断与介入成像部门，神经放射科，德克萨斯大学健康科学中心，德克萨斯，美国） ； Beth Israel Deaconess Medical Center, Harvard Medical School（贝斯以色列医疗中心，哈佛医学院） ； UNIDAD DE PATOLOGIA CLINICA（临床病理部门） 纠错

专题命中 病理影像 ：biomedical(comments,journal_ref)；分类 cs.CV、eess.IV

Comments Accepted for publication at the Journal of Machine Learning for Biomedical Imaging (MELBA)https://melba-journal.org/2025:005

Journal ref Machine.Learning.for.Biomedical.Imaging. 3 (2025)

Central Dogma Cycle and Network: A Model for Cell Memory

Martin R. Schiller

专题命中 病理影像 ：pathology(abstract)；分类 q-bio

Antibody Consumption-Driven Dynamic Competition: A Systems Hypothesis for the Transition from Acute Immune Response to Post-Infection Sequelae

Shi Qiru

专题命中 病理影像 ：pathology(abstract)；分类 q-bio

Are EEG functional networks really describing the brain? A comparison with other information-processing complex systems

Sofia Gil-Rodrigo, Raúl López-Martín, Görsev Yener, Jan R. Wiersema, Bahar Güntekin, Massimiliano Zanin

专题命中 病理影像 ：pathology(abstract)；分类 q-bio

Comments 5 pages plus SI, 3 figures

Exploration of the potential energy surface for the conformational interconversion of the amyloid $β$ peptide at the fibril end

Yasuhiro Oishi, Motoharu Kitatani, Kichitaro Nakajima, Hirotsugu Ogi, Koichi Kusakabe

专题命中 病理影像 ：pathology(abstract)；分类 q-bio

Comments 4 figures, 1 table

TopSpace: spatial topic modeling for unsupervised discovery of multicellular spatial tissue structures in multiplex imaging

Junsouk Choi, Jian Kang, Veerabhadran Baladandayuthapani

专题命中 病理影像 ：pathology(abstract)；分类 q-bio

Complex non-Markovian dynamics and the dual role of astrocytes in Alzheimer's disease development and propagation

Swadesh Pal, Roderick Melnik

专题命中 病理影像 ：pathology(abstract)；分类 q-bio

Comments 21 pages, 9 figures, 3 tables

ICBM community cancer registry analysis: a focus on Non-Hodgkin Lymphoma cases in missileers

Dawn L. Sanderson, Richard L. Smith

专题命中 病理影像 ：diagnosis(abstract)；分类 q-bio

Multi-Marker Similarity enables reduced-reference and interpretable image quality assessment in optical microscopy

Elena Corbetta, Thomas Bocklitz

专题命中 病理影像 ：biomedical(abstract)；分类 q-bio

Comments 24 pages, 11 figures, 1 table

Tinnitus, lucid dreaming and awakening. An online survey and theoretical implications

Robin Guillard, Nicolas Dauman, Aurélien Cadix, Charlotte Glabasnia Linck, Marco Congedo, Dirk de Ridder, Alain Londero

专题命中 病理影像 ：pathology(abstract)；分类 q-bio

Journal ref Hearing Research, 2025, 458, pp.109204

AI-driven control of bioelectric signalling for real-time topological reorganization of cells

Gonçalo Hora de Carvalho

专题命中 病理影像 ：biomedical(abstract)；分类 q-bio

Nonlocal Models in Biology and Life Sciences: Sources, Developments, and Applications

Swadesh Pal, Roderick Melnik

专题命中 病理影像 ：biomedical(abstract)；分类 q-bio

Comments 83 pages

The same but different: impact of animal facility sanitary status on a transgenic mouse model of Alzheimer's disease

Caroline Ismeurt-Walmsley, Patrizia Giannoni, Florence Servant, Linda-Nora Mekki, Kevin Baranger, Santiago Rivera, Philippe Marin, Benjamin Lelouvier, Sylvie Claeysen

专题命中 病理影像 ：pathology(abstract)；分类 q-bio

Estimating Treatment Effect under Additive Hazards Models with High-dimensional Covariates

Jue Hou, Jelena Bradic, Ronghui Xu

专题命中 病理影像 ：biomedical(abstract)；分类 q-bio

Journal ref Journal of the American Statistical Association 118(541) 327-342 (2021)