Most epidemic models assume equal mixing among members of a population. An alternative approach is to model a population as random network in which individuals may have heterogeneous connectivity. This paper builds on previous research by describing the exact dynamical behavior of epidemics as they occur in random networks. A system of nonlinear differential equations is presented which describes the behavior of epidemics spreading through random networks with arbitrary degree distributions. The degree distribution is observed to have significant impact on both the final size and time scale of epidemics.
We study dynamics of a variant of the SIR the model, where we assume that individuals respond differently to dynamics of the epidemic. Their heterogeneous response is modeled by the Preisach hysteresis operator. The degree of heterogeneity of the response is measured by the variance $σ^2$ of the corresponding distribution (the Preisach density function). The proposed model has a continuum of endemic equilibrium states characterized by different proportions of susceptible, infected and recovered populations. We consider how the limit point of the epidemic trajectory and the infection peak along…
Case isolation, that is, detection and isolation of infected individuals in order to prevent spread, is a strategy to curb infectious disease epidemics. Here, we study the efficiency of a case isolation strategy subject to time delays in terms of its ability to stabilize the epidemic spread in heterogeneous contact networks. For an SIR epidemic model, we characterize the stability boundary analytically and show how it depends on the time delay between infection and isolation as well as the heterogeneity of the inter-individual contact network, quantified by the variance in contact rates. We sh…
To provide a comprehensive view for dynamics of and on many real-world temporal networks, we investigate the interplay of temporal connectivity patterns and spreading phenomena, in terms of the susceptible-infected-removed (SIR) model on the modified activity-driven temporal network (ADTN) with memory. In particular, we focus on how the epidemic threshold of the SIR model is affected by the heterogeneity of nodal activities and the memory strength in temporal and static regimes, respectively. While strong ties (memory) between nodes inhibit the spread of epidemic to be localized, the heterogen…
This paper introduces a theoretical framework for the analysis and control of the stochastic susceptible-infected-removed (SIR) spreading process over a network of heterogeneous agents. In our analysis, we analyze the exact networked Markov process describing the SIR model, without resorting to mean-field approximations, and introduce a convex optimization framework to find an efficient allocation of resources to contain the expected number of accumulated infections over time. Numerical simulations are presented to illustrate the effectiveness of the obtained results.
We study the SIR ("susceptible, infected, removed/recovered") model on directed graphs with heterogeneous transmission probabilities within the message-passing approximation. We characterize the percolation transition, predict cluster size distributions and suggest vaccination strategies. All predictions are compared to numerical simulations on real networks. The percolation threshold which we predict is a rigorous lower bound to the threshold on real networks. For large, locally tree-like networks, our predictions agree very well with the numerical data.
In the last decade, humanity has faced many different pandemics such as SARS, H1N1, and presently novel coronavirus (COVID-19). On one side, scientists are focusing on vaccinations, and on the other side, there is a need to propose models that can help us in understanding the spread of these pandemics as it can help governmental and other concerned agencies to be well prepared, especially from pandemics, which spreads faster like COVID-19. The main reason for some epidemic turning into pandemics is the connectivity among different regions of the world, which makes it easier to affect a wider g…
Most real networks are characterized by connectivity patterns that evolve in time following complex, non-Markovian, dynamics. Here we investigate the impact of this ubiquitous feature by studying the Susceptible-Infected-Recovered (SIR) and Susceptible-Infected-Susceptible (SIS) epidemic models on activity driven networks with and without memory (i.e., Markovian and non-Markovian). We show that while memory inhibits the spreading process in SIR models, where the epidemic threshold is moved to larger values, it plays the opposite effect in the case of the SIS, where the threshold is lowered. Th…
We show that the mean field equations for the SIR epidemic can be exactly solved for a network with arbitrary degree distribution. Our exact solution consists of reducing the dynamics to a lone first order differential equation, which has a solution in terms of an integral over functions dependent on the degree distribution of the network, and reconstructing all mean field functions of interest from this integral. Irreversibility of the SIR epidemic is crucial for the solution. We also find exact solutions to the sexually transmitted disease SI epidemic on bipartite graphs, to a simplified rum…
We investigate the effects of modular and temporal connectivity patterns on epidemic spreading. To this end, we introduce and analytically characterise a model of time-varying networks with tunable modularity. Within this framework, we study the epidemic size of Susceptible-Infected-Recovered, SIR, models and the epidemic threshold of Susceptible-Infected-Susceptible, SIS, models. Interestingly, we find that while the presence of tightly connected clusters inhibit SIR processes, it speeds up SIS diseases. In this case, we observe that heterogeneous temporal connectivity patterns and modular st…
The spread of an infectious disease depends on intrinsic properties of the disease as well as the connectivity and actions of the population. This study investigates the dynamics of an SIR type model which accounts for human tendency to avoid infection while also maintaining preexisting, interpersonal relationships. Specifically, we use a network model in which individuals probabilistically deactivate connections to infected individuals and later reconnect to the same individuals upon recovery. To analyze this network model, a mean field approximation consisting of a system of fourteen ordinar…
We investigate a network model based on an infinite regular square lattice embedded in the Euclidean plane where the node connection probability is given by the geometrical distance of nodes. We show that the degree distribution in the basic model is sharply peaked around its mean value. Since the model was originally developed to mimic the social network of acquaintances, to broaden the degree distribution we propose its generalization. We show that when heterogeneity is introduced to the model, it is possible to obtain fat tails of the degree distribution. Meanwhile, the small-world phenomen…
This paper studies the dynamics of a network-based SIRS epidemic model with vaccination and a nonmonotone incidence rate. This type of nonlinear incidence can be used to describe the psychological or inhibitory effect from the behavioral change of the susceptible individuals when the number of infective individuals on heterogeneous networks is getting larger. Using the analytical method, epidemic threshold $R_0$ is obtained. When $R_0$ is less than one, we prove the disease-free equilibrium is globally asymptotically stable and the disease dies out, while $R_0$ is greater than one, there exist…
Much effort has been directed towards using mathematical models to understand and predict contagious disease, in particular Ebola outbreaks. Classical SIR (susceptible-infected-recovered) compartmental models capture well the dynamics of the outbreak in certain communities, and accurately describe the differences between them based on a variety of parameters. However, repeated resurgence of Ebola contagions suggests that there are components of the global disease dynamics that we don't yet fully understand and can't effectively control. In order to understand the dynamics of a more widespread …
Investigating the effect of adaptive optimal control function in epidemic dynamics: predictions and strategy evolution based on SIR/V game theoretic framework
Empirical studies suggest that contact patterns follow heterogeneous inter-event times, meaning that intervals of high activity are followed by periods of inactivity. Combined with birth and death of individuals, these temporal constraints affect the spread of infections in a non-trivial way and are dependent on the particular contact dynamics. We propose a stochastic model to generate temporal networks where vertices make instantaneous contacts following heterogeneous inter-event times, and leave and enter the system at fixed rates. We study how these temporal properties affect the prevalence…
Epidemic threshold is one of the most important features of the epidemic dynamics. Through a lot of numerical simulations in classic Susceptible-Infected-Recovered (SIR) and Susceptible-Infected-Susceptible (SIS) models on various types of networks, we study the simulated identification of epidemic thresholds on finite-size networks. We confirm that the susceptibility measure goes awry for the SIR model due to the bimodal distribution of outbreak sizes near the critical point, while the simulated thresholds of the SIS and SIR models can be accurately determined by analyzing the peak of the epi…
We study the dynamics of epidemic and reaction-diffusion processes in metapopulation models with heterogeneous connectivity pattern. In SIR-like processes, along with the standard local epidemic threshold, the system exhibits a global invasion threshold. We provide an explicit expression of the threshold that sets a critical value of the diffusion/mobility rate below which the epidemic is not able to spread to a macroscopic fraction of subpopulations. The invasion threshold is found to be affected by the topological fluctuations of the metapopulation network. The presented results provide a ge…
The outcome of SIR epidemics with heterogeneous infective lifetimes, or heterogeneous susceptibilities, can be mapped onto a directed percolation process on the underlying contact network. In this paper we study SIR models where heterogeneity is a result of the degree dependence of disease transmission rates. We develop numerical methods to determine the epidemic threshold, the epidemic probability and epidemic size close to the threshold for configuration model contact networks with arbitrary degree distribution and an arbitrary matrix of transmission rates (dependent on transmitting and rece…
The dynamics of cascading activation, such as rapid changes in public opinion and the outbreak of disease epidemics, have a crucial dependence on the connectivity patterns among the agents. We study cascading dynamics in modular, degree-heterogeneous networks, and consider the impact of intra-module seeding strategy on inter-module spread. Specifically, we establish that although activating the highest-degree nodes is more effective than random selection at growing a cascade locally, there is a critical level of inter-module connectivity required for a cascade to cross from one module to anoth…
One of the famous results of network science states that networks with heterogeneous connectivity are more susceptible to epidemic spreading than their more homogeneous counterparts. In particular, in networks of identical nodes it has been shown that heterogeneity can lower the epidemic threshold at which epidemics can invade the system. Network heterogeneity can thus allow diseases with lower transmission probabilities to persist and spread. Here, we point out that for real world applications, this result should not be regarded independently of the intra-individual heterogeneity between peop…
Networks of contacts capable of spreading infectious diseases are often observed to be highly heterogeneous, with the majority of individuals having fewer contacts than the mean, and a significant minority having relatively very many contacts. We derive a two-dimensional diffusion model for the full temporal behavior of the stochastic susceptible-infectious-recovered (SIR) model on such a network, by making use of a time-scale separation in the deterministic limit of the dynamics. This low-dimensional process is an accurate approximation to the full model in the limit of large populations, eve…
Epidemic spreading and cascading failure are two important dynamical processes over complex networks. They have been investigated separately for a long history. But in the real world, these two dynamics sometimes may interact with each other. In this paper, we explore a model combined with SIR epidemic spreading model and local loads sharing cascading failure model. There exists a critical value of tolerance parameter that whether the epidemic with high infection probability can spread out and infect a fraction of the network in this model. When the tolerance parameter is smaller than the crit…
Realistic human contact networks capable of spreading infectious disease, for example studied in social contact surveys, exhibit both significant degree heterogeneity and clustering, both of which greatly affect epidemic dynamics. To understand the joint effects of these two network properties on epidemic dynamics, the effective degree model of Lindquist et al. is reformulated with a new moment closure to apply to highly clustered networks. A simulation study comparing alternative ODE models and stochastic simulations is performed for SIR (Susceptible-Infected-Removed) epidemic dynamics, inclu…
We study a multi-type SIR epidemic process among a heterogeneous population that interacts through a network. When we base social contact on a random graph with given vertex degrees, we give limit theorems on the fraction of infected individuals. For a given social distancing individual strategies, we establish the epidemic reproduction number $R_0$ which can be used to identify network vulnerability and inform vaccination policies. In the second part of the paper we study the equilibrium of the social distancing game, in which individuals choose their social distancing level according to an a…
In this work, we study the epidemic SIR model on a system which takes into consideration face-to-face interaction networks. This approach has been used as prototype to describe people interactions in different kinds of social organizations and, here, it is considered by means of three features of human interactions: the mobility, the duration of the interaction among people, and the dependence of the number of interactions of each person on the time evolution of the system. For this purpose, the initial configuration of the system is set as a regular square lattice where the nodes are the indi…
Infection can spread easily on networks with heterogeneous degree distribution. Here, we considered targeted immunization on such networks, wherein a fraction of individuals with the highest connectivity are immunized. To quantify the effect of this targeted immunization approach on population immunity, we proposed a method using the type reproduction number. Consequently, we derived a precise and simple formula that can yield the immunization threshold, which, to the best of our knowledge, is the first such result presented in the literature.
The adoption of prophylaxis attitudes, such as social isolation and use of face masks, to mitigate epidemic outbreaks strongly depends on the support of the population. In this work, we investigate a susceptible-infected-recovered (SIR) epidemic model, in which the epidemiological perception of the environment can adapt the behavior of susceptible individuals towards preventive behavior. {Two compartments of susceptible individuals are considered, to distinguish those that adopt or not prophylaxis attitudes.} Two rules, depending on local and global epidemic prevalence, for the spread of the e…
In this paper, we investigate the distributed link removal strategy for networked meta-population epidemics. In particular, a deterministic networked susceptible-infected-recovered (SIR) model is considered to describe the epidemic evolving process. In order to curb the spread of epidemics, we present the spectrum-based optimization problem involving the Perron-Frobenius eigenvalue of the matrix constructed by the network topology and transition rates. A modified distributed link removal strategy is developed such that it can be applied to the SIR model with heterogeneous transition rates on w…
Models of threshold driven contagion explain the cascading spread of information, behavior, systemic risk, and epidemics on social, financial and biological networks. At odds with empirical observation, these models predict that single-layer unweighted networks become resistant to global cascades after reaching sufficient connectivity. We investigate threshold driven contagion on weight heterogeneous multiplex networks and show that they can remain susceptible to global cascades at any level of connectivity, and with increasing edge density pass through alternating phases of stability and inst…
The spatial structure of populations is a key element in the understanding of the large scale spreading of epidemics. Motivated by the recent empirical evidence on the heterogeneous properties of transportation and commuting patterns among urban areas, we present a thorough analysis of the behavior of infectious diseases in metapopulation models characterized by heterogeneous connectivity and mobility patterns. We derive the basic reaction-diffusion equation describing the metapopulation system at the mechanistic level and derive an early stage dynamics approximation for the subpopulation inva…
In this paper, we propose a modified susceptible-infected-recovered (SIR) model, in which each node is assigned with an identical capability of active contacts, $A$, at each time step. In contrast to the previous studies, we find that on scale-free networks, the density of the recovered individuals in the present model shows a threshold behavior. We obtain the analytical results using the mean-field theory and find that the threshold value equals 1/A, indicating that the threshold value is independent of the topology of the underlying network. The simulations agree well with the analytic resul…
Dimension reduction is a common strategy to study non-linear dynamical systems composed by a large number of variables. The goal is to find a smaller version of the system whose time evolution is easier to predict while preserving some of the key dynamical features of the original system. Finding such a reduced representation for complex systems is, however, a difficult task. We address this problem for dynamics on weighted directed networks, with special emphasis on modular and heterogeneous networks. We propose a two-step dimension-reduction method that takes into account the properties of t…
