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arXiv cs/0109040cs.DBq-bio.PE
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生物多样性数据库系统BODHI的建立

The Building of BODHI, a Bio-diversity Database System

B. J. Srikanta, Jayant Haritsa, Udaysankar Sen

摘要:

我们最近建立了一个名为BODHI的数据库系统,旨在存储植物生物多样性信息。它基于面向对象的建模方法,完全围绕公共领域软件开发。BODHI的独特之处在于它无缝集成了各种类型的数据,包括分类特征,空间分布和遗传序列,从而涵盖了从分子到生物体水平的整个信息范围。各种复杂的索引策略被纳入有效地访问各种类型的数据,并采用基于规则的查询处理器优化查询执行。在本文中,我们报告我们的经验,在建设BODHI和它的性能特点,一组有代表性的查询。

英文摘要:

We have recently built a database system called BODHI, intended to store plant bio-diversity information. It is based on an object-oriented modeling approach and is developed completely around public-domain software. The unique feature of BODHI is that it seamlessly integrates diverse types of data, including taxonomic characteristics, spatial distributions, and genetic sequences, thereby spanning the entire range from molecular to organism-level information. A variety of sophisticated indexing strategies are incorporated to efficiently access the various types of data, and a rule-based query processor is employed for optimizing query execution. In this paper, we report on our experiences in building BODHI and on its performance characteristics for a representative set of queries.

机构、总结、中文摘要均由AI分析而来,可能存在错误,请以论文正文为准。

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