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arXiv 2609.38518physics.chem-phphysics.atom-ph

MIL-101(Cr)次级构筑单元形成第一步的机器学习原子间势自由能面

A Machine-Learned Interatomic Potential Free-Energy Surface for the First Step of MIL-101(Cr) Secondary Building Unit Formation

  • University of Notre Dame(圣母大学)

机构由 AI 辅助整理,请以论文原文为准。

Orlando A. Mendible-Barreto, Yamil J. Colón

AI总结:

本研究利用微调的机器学习势MACE-POLAR-M,在AIMD不可行的理论水平下获得MIL-101(Cr) SBU形成第一步的收敛自由能面,揭示水释放为两步过程,并确立训练数据组成对预测可靠性的关键作用。

AI中文摘要:

金属有机框架(MOF)的自组装机制仍缺乏充分表征,因为从头算分子动力学(AIMD)虽然精确,但计算成本过高,难以收敛控制次级构筑单元(SBU)成核与生长的自由能面(FES)。本研究针对MIL-101(Cr) SBU形成的第一步解决了这一限制。利用MACE-POLAR-M——一种基于探索性元动力学构建的紧凑DFT参考数据集微调的长程感知等变机器学习原子间势——本研究在AIMD将极其昂贵的理论水平(ωB97M-V/def2-TZVPP)下获得了该步骤的收敛二维FES。预训练模型能采样相关构型,但热力学预测错误,给出吸热反应和虚假的全局最小值。微调纠正了这两点,恢复了预期的放热过程和正确的产物盆地,与文献提出的机制一致。所得FES还细化了机制,表明铬中心的水释放是逐步进行的,经过两个连续能垒,而非最初提出的单一协同步骤。我们发现模型精度特定于反应坐标,不延伸至微调中排除的解离碎片构型,这是训练数据选择的直接结果,保护了FES预测任务中反应路径上的精度。总之,这些结果建立了一条经验证、计算可行的途径,用于获取MOF形成化学的自由能面,可迁移至AIMD仍不可行的其他反应,并确定训练数据组成是微调检查点能否可靠描述哪些反应性质的关键决定因素。

英文摘要:

Metal-organic framework (MOF) self-assembly mechanisms remain poorly characterized because ab initio molecular dynamics (AIMD) are accurate but too computationally expensive to converge the free-energy surfaces (FES) that govern secondary building unit (SBU) nucleation and growth. This work addresses that limitation for the first step of MIL-101(Cr) SBU formation. Using MACE-POLAR-M, a long-range-aware equivariant machine-learned interatomic potential fine-tuned on a compact DFT reference dataset built from exploratory metadynamics, this work obtains a converged 2D FES for this step at a level of theory (ωB97M-V/def2-TZVPP) at which AIMD would be prohibitively expensive. The pre-trained model samples relevant configurations but gets the thermodynamics wrong, predicting an endothermic reaction and a false global minimum. Fine-tuning corrects both, recovering the expected exothermic process and the correct product basin in agreement with proposed literature mechanisms. The resulting FES also refines the mechanism. It shows that water release from the chromium center proceeds stepwise, through two sequential energy barriers, rather than the single concerted step originally proposed. We find that model accuracy is specific to the reaction coordinate and does not extend to the dissociated fragment configurations excluded from fine-tuning, a direct consequence of the training-data choice that protects accuracy along the reaction path for the FES prediction task. Together, these results establish a validated, computationally tractable route to obtain free-energy surfaces for MOF formation chemistry, transferable to other reactions where AIMD remains prohibitive, and identify training-data composition as the key determinant of which reaction properties a fine-tuned checkpoint can reliably describe.

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