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arXiv 2609.12169cs.CV

当真实标签保真度至关重要时:基于视觉Transformer和机器学习的小麦条点花叶病毒检测无人机系统框架

When Ground-Truth Fidelity Matters: An Orchestrated UAS Framework for Wheat Streak Mosaic Virus Detection Using Vision Transformers and Machine Learning

Dewi Endah Kharismawati, Sandeep Dhakal, Courtney E. McCusker, Jennifer R. Wilson, Erik W. Ohlson, Sami Khanal

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中文总结 AI 辅助

针对WSMV检测中标签噪声问题,提出基于UAS多光谱影像和视觉Transformer的自动化流程,揭示处理标签导致的高准确率偏差,强调生物学真实标签对模型泛化的重要性。

中文摘要 AI 辅助

小麦条点花叶病毒(WSMV)是甜玉米及其他谷类作物的一种破坏性病原体,导致产量损失,并因其症状在空间上多变且细微而使得早期检测复杂化。在甜玉米种子生产中,WSMV还具有监管重要性,因为新西兰和智利等国家的植物检疫法规要求种子批次必须经过认证为无病毒。目视巡查不可靠,因为症状可能类似于非生物胁迫,而酶联免疫吸附测定(ELISA)虽然准确,但成本高、劳动密集且难以规模化。我们提出了一种使用无人机系统(UAS)多光谱影像进行植株水平WSMV检测的自动化流程。该框架整合了正射影像重建、地理空间对齐、植株提取以及使用具有七通道输入(五个光谱波段、NDVI和NDRE)的视觉Transformer进行分类。基于处理标签,模型在跨越多个生长阶段的超过6,500个测试图像块上达到了89%的准确率。然而,基于ELISA的真实标签揭示了显著的标签噪声:在接种地块中,只有一小部分采样植株被感染。因此,处理标签并不能可靠地代表感染状态,高准确率在很大程度上是由标签偏差而非疾病检测驱动的。在针对行级症状严重程度和植株级ELISA标签时,性能显著下降。在这些更高保真度但样本量较小的条件下,深度学习和经典机器学习均表现出有限的泛化能力,并且在ELISA确认的模拟接种和感染植株之间缺乏强的可分性。这些结果表明,基于UAS的疾病检测受到标签保真度和数据可用性的制约,强调了与真实世界条件相符的生物学基础标签和模型的重要性。

英文摘要

Wheat streak mosaic virus (WSMV) is a destructive pathogen of sweet corn and other cereal crops, causing yield losses and complicating early detection because symptoms are spatially variable and subtle. In sweet corn seed production, WSMV also has regulatory importance, as phytosanitary regulations from countries such as New Zealand and Chile require seed lots to be certified virus-free. Visual scouting is unreliable because symptoms can resemble abiotic stress, while enzyme-linked immunosorbent assay (ELISA) is accurate but expensive, labor-intensive, and difficult to scale. We present an automated pipeline for plant-level WSMV detection using unmanned aircraft systems (UAS) multispectral imagery. The framework integrates orthomosaic reconstruction, geospatial alignment, plant extraction, and classification using a Vision Transformer with seven-channel inputs (five spectral bands, NDVI, and NDRE). Using treatment-based labels, the model achieved 89% accuracy on over 6,500 test patches across multiple growth stages. However, ELISA-based ground truth revealed substantial label noise: only a small fraction of sampled plants in inoculated plots were infected. Treatment labels therefore did not reliably represent infection status, and the high accuracy was largely driven by label bias rather than disease detection. Performance decreased markedly against row-level symptom severity and plant-level ELISA labels. Under these higher-fidelity but smaller-sample conditions, both deep learning and classical machine learning showed limited generalization and weak separability between ELISA-confirmed mock-inoculated and infected plants. These results show that UAS-based disease detection is constrained by label fidelity and data availability, emphasizing biologically grounded labels and models aligned with real-world conditions.

发表机构

  • The Ohio State University(俄亥俄州立大学)
  • USDA Agricultural Research Service(美国农业部农业研究局)

机构由 AI 辅助整理,请以论文原文为准。

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