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B-MIM:用于细粒度解剖结构通用分割的偏置掩码图像建模

B-MIM: Biased Masked Image Modeling for Generalizable Segmentation of Fine-Grained Anatomical Structures

Sebastián González, Karen Sanchez, José M. Saavedra, Marcelo Pizarro, Bernard Ghanem

arXiv 2608.24364首次发表:更新:

发表机构

Universidad de Chile; King Abdullah University of Science and Technology (KAUST); Universidad de los Andes(智利大学; 阿卜杜拉国王科技大学; 安第斯大学)

机构由 AI 辅助整理,请以论文原文为准。

AI 中文总结

本文提出B-MIM方法改进iBOT目标,通过降低全局语义压力增强编码器对细粒度解剖结构的特征捕获,在跨数据集肝血管、肿瘤分割任务中仅更新部分参数就实现了更优性能,提升了模型泛化能力。

AI 中文摘要

自监督预训练可为医学成像提供可迁移的表示,但大多数CT编码器仍偏向于粗粒度语义理解,限制了其对血管或小肿瘤等细粒度解剖结构的敏感性。本文提出偏置掩码图像建模(Biased Masked Image Modeling,B-MIM),这是对iBOT目标的改进,该方法会随机降低全局语义对齐,以优先考虑局部块重建。这种偏置鼓励编码器捕获高频形态细节和结构连续性。我们整理了来自17个公开来源的9955项经筛选研究的多机构CT腹部数据集,并使用B-MIM预训练了一个3D Swin Transformer骨干网络。在跨数据集的肝血管分割实验中,与完全微调的基线相比,所提出的编码器仅更新部分参数,就提高了拓扑保真度(clDice)并在肿瘤分割中取得了有竞争力的Dice分数。我们的结果表明,预训练期间降低全局语义压力可增强对复杂解剖结构的泛化能力。

英文摘要

Self-supervised pretraining enables transferable representations for medical imaging, yet most CT encoders remain biased toward coarse semantic understanding, limiting their sensitivity to fine-grained anatomical structures such as vessels or small tumors. In this paper, we introduce Biased Masked Image Modeling (B-MIM), a modification of the iBOT objective that stochastically reduces global semantic alignment to prioritize local patch reconstruction. This bias encourages the encoder to capture high-frequency morphological details and structural continuity. We curate a multi-institutional CT abdominal dataset of 9,955 filtered studies from 17 public sources and pretrain a 3D Swin Transformer backbone using B-MIM. Across inter-dataset experiments on liver vessel segmentation, the proposed encoder improves topological fidelity (clDice) and achieves competitive Dice scores in tumor segmentation, compared to fully fine-tuned baselines, despite updating only a fraction of the parameters. Our results suggest that reducing global semantic pressure during pretraining enhances generalization to intricate anatomical structures.

CommentsPublished at MedAGI in MICCAI 2026

论文原文

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