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推断休斯顿各污水处理厂呼吸道合胞病毒的空间传播动态

Modeling Disease Transmission Dynamics with Population-Weighted Spatial Inference for Wastewater-Based Epidemiology

Jose R. Palacio, Katherine B. Ensor, Julia Schedler, Rebecca Schneider, Kaavya Domakonda, Loren Hopkins, Lauren B. Stadler, Sharmila Bhandari

arXiv 2608.08823首次发表:更新:

发表机构

Rice University; California Polytechnic State University; Houston Health Department(莱斯大学; 加州州立理工大学; 休斯顿卫生局)

机构由 AI 辅助整理,请以论文原文为准。

AI 中文总结

该研究利用休斯顿15座污水处理厂的废水数据,通过新型距离构建空间权重矩阵扩展贝叶斯更新模型,揭示了跨污水处理厂的呼吸道合胞病毒传播,为病毒监测提供了更准确的方法。

AI 中文摘要

基于废水的流行病学(WBE)是一种有效且无创的工具,用于追踪社区层面呼吸道病毒的传播,然而标准更新模型会孤立处理每个污水处理厂(WWTP),尽管呼吸道合胞病毒(RSV)会通过跨越服务区域边界的接触网络传播。利用休斯顿15座WWTP的每周数据,我们通过一种新型人口扩展豪斯多夫距离构建的空间权重矩阵,将相邻WWTP耦合,扩展了单厂贝叶斯更新模型;该距离定义为WWTP之间的方向距离,衡量WWTP需延伸多远才能接触到相邻WWTP居民的有意义比例。单个参数ρ控制厂级增长率中的空间混合,使我们能够恢复有效再生数R_it。我们发现ρ的估计值远高于零,表明存在大量跨WWTP传播,这是独立厂模型无法捕捉的。与独立厂基准(ρ=0)相比,空间耦合改变了厂级R_it,同时基本未改变推断的感染轨迹。

英文摘要

Wastewater-based epidemiology (WBE) is an effective, noninvasive tool for tracking community-level circulation of respiratory viruses, yet standard renewal models treat each wastewater treatment plant (WWTP) in isolation, even though respiratory syncytial virus (RSV) spreads through contact networks that cross service-area boundaries. Using weekly data from $m = 15$ Houston WWTPs, we extend a single-plant Bayesian renewal model by coupling neighboring WWTPs via a spatial weight matrix built using a novel Population Extended Hausdorff Distance, defined as a directional distance between WWTPs. This distance measures how far a WWTP must reach to access a meaningful share of a neighboring WWTP's residents. A single parameter $ρ$ controls spatial mixing in the plant-level growth rate, allowing us to recover the effective reproduction number $R_{it}$. We find that $ρ$ is estimated well above zero, indicating substantial cross-WWTP transmission that the independent-plant model cannot capture. Spatial coupling reshapes plant-level $R_{it}$ relative to the independent-plant baseline ($ρ= 0$) while leaving inferred infection trajectories essentially unchanged.

Comments44 pages (including Appendix, pp. 42-44), 18 figures, 2 tables

论文原文

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