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关于组合复合DNA编码的进一步研究

More on Codes for Combinatorial Composite DNA

Zuo Ye, Omer Sabary, Ryan Gabrys, Eitan Yaakobi, Ohad Elishco

arXiv 2608.08018首次发表:更新:

AI 中文总结

本文研究$(t,e)$-复合非对称纠错码的构造,提出新构造方法,给出最优$(2,e)$-CAECCs,引入弱$B_e$-集,还分析了列表解码放宽要求后的相关结果。

AI 中文摘要

本文聚焦于近期研究的$(t,e)$-复合非对称纠错码($(t,e)$-CAECCs)的唯一可译码/列表可译码的构造。设$X$为$m\times n$的二元矩阵,其中每行的汉明重量为$w$。当$X$中至多$t$行出现错误,且这些出错行中每行至多有$e$个$1\to0$错误时,称$X$中发生了$(t,e)$-复合非对称错误。针对一般的$m,n,w,t,e$,我们提出了冗余度至多为$(t-1)\text{log}(m)+O(1)$的$(t,e)$-CAECCs的新构造,其中$O(1)$是与码长$m$无关的常数。特别地,这给出了一类在冗余度方面最优的$(2,e)$-CAECCs(将冗余度视为行数$m$的函数)。当$m$为素数幂时,冗余度可进一步降至$(t-1)\text{log}(m)-O(\text{log}(m))$。为进一步增大这些码的规模,我们引入了一种名为弱$B_e$-集的组合对象。当$e=w$时,我们展示了对所提码进行高效编码/解码的方法。最后,我们研究若将唯一解码的要求放宽为列表解码可获得的增益,结果表明当列表大小为$t!$或$t$的指数函数时,存在具有恒定冗余度的列表可译码$(t,e)$-CAECCs;当列表大小为2时,存在冗余度为$\text{log}(m)+O(1)$的列表可译码$(3,2)$-CAECCs。

英文摘要

In this paper, we focus on constructions of unique-decodable/list-decodable on the recently studied $(t,e)$-composite-asymmetric error-correcting codes ($(t,e)$-CAECCs). Let $X$ be an $m\times n$ binary matrix, in which each row has Hamming weight $w$. When at most $t$ rows of $X$ suffer from errors and in each of these erroneous rows, there are at most $e$ $1 \to 0$ errors, we say that a $(t,e)$-composite-asymmetric-error occurs in $X$. For general $m,n,w,t,e$, we propose new constructions of $(t,e)$-CAECCs with redundancy at most $(t-1)\log(m)+O(1)$, where $O(1)$ is a number independent of the code-length $m$. In particular, this gives a class of $(2,e)$-CAECCs that are optimal in terms of their redundancy. %(in terms of redundancy, regarded as a function of the number of rows $m$) s. When $m$ is a prime power, the redundancy can be further reduced to $(t-1)\log(m)-O(\log(m))$. To further increase the size of these codes, we introduce a combinatorial object called a weak $B_e$-sets. When $e=w$, we show an efficient way to encode/decode our codes. At last, we investigate how much we can gain if we relax the requirement of uniquely decoding to list-decoding. It is shown that when the list size is $t!$ or an exponential function of $t$, there are list-decodable $(t,e)$-CAECCs with constant redundancy. When the list size is two, we show that there are list-decodable $(3,2)$-CAECCs with redundancy $\log(m)+O(1)$.

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