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arXiv 2605.09752physics.chem-phcond-mat.mtrl-sci
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极化嵌入量子力学/分子力学用于周期系统

Polarizable Embedding QM/MM for Periodic Systems

University of Ulm(乌尔姆大学);Science Institute and Faculty of Physical Sciences, University of Iceland(冰岛大学科学研究所与物理科学学院);Helmholtz-Institute Ulm for Electrochemical Energy Storage, University of Ulm(乌尔姆亥姆霍兹电化学储能研究所);Karlsruhe Institute of Technology(卡尔斯鲁厄理工学院)

Julian Bessner, Anoop Ajaya Kumar Nair, Magnus Andreas Hilduberg Christiansen, Timo Jacob, Hannes Jónsson, Elvar Örn Jónsson

AI总结:

本文提出了一种适用于周期系统的极化嵌入量子力学/分子力学方法,通过引入单点和聚类多极展开点实现周期相互作用势的高效收敛,结合多极展开和阻尼函数以提高计算精度。

摘要:

本文介绍了一种适用于周期系统的通用极化嵌入(PE)量子力学/分子力学(QM/MM)方案,描述了两个子系统的相互极化。QM系统用密度泛函理论(DFT)描述,并耦合到单中心多极展开(SCME)模型,该模型表征MM区域中的H₂O分子。在SCME中,H₂O分子被赋予各向异性偶极子和四极子极化率以及永久多极子,最高至十六极子。我们的嵌入方案通过引入单点和聚类多极展开点在远场实现周期相互作用势的平滑和高效收敛。通过精心选择近场和远场的势能展开,PE-QM/MM计算达到了与纯QM计算相当的精度。在短程范围内,QM和MM子系统之间的静电相互作用通过实空间和成对各向同性阻尼函数进行衰减,从而产生屏蔽相互作用并防止过极化。在分子动力学模拟中,两个子系统通过弹性散射辅助的柔性内区[Kirchhoff等,JCTC,2021,17,9,5863]分离,确保了两个子系统之间边界处径向分布的平滑过渡。

英文摘要:

A general polarizable embedded (PE) quantum mechanics/molecular mechanics scheme for periodic systems is presented, describing mutual polarization of the two subsystems. The QM system, described with density functional theory (DFT), is coupled to a single center multipole expansion (SCME) model, characterising H$_2$O molecules in the MM region. In SCME the H$_2$O molecules are ascribed anisotropic dipole and quadrupole polarizabilities and permanent multipoles up to and including the hexadecapole. Our embedding scheme illustrates a smooth and efficient convergence pattern of the periodic interaction potential by introducing a single and clustered multipole expansion points in the far-field. By choosing the near- and far-field expansion of the potential carefully the PE-QM/MM calculation matches the level of accuracy of a the QM calculation. In the short range, the electrostatic interaction between the QM and MM subsystems is damped with a real-space and pair-wise isotropic damping functions - resulting in a screened interaction and preventing over-polarization. In molecular dynamics simulations the two subsystems are separated with the elastic scattering assisted flexible inner region [Kirchhoff et. al. JCTC, 2021, 17, 9, 5863] - ensuring a smooth transition in the radial distribution at the boundary between the two subsystems.

机构、总结、中文摘要均由AI分析而来,可能存在错误,请以论文正文为准。

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