Alzheimers Disease Progression Prediction Based on Manifold Mapping of Irregularly Sampled Longitudinal Data
College of Computer Science and Technology, Huaqiao University(华侨大学计算机科学与技术学院);Key Laboratory of Computer Vision and Machine Learning in Fujian Province(福建省计算机视觉与机器学习重点实验室);College of Information Science and Engineering,Ritsumeikan University(立命馆大学信息科学与工程学院)
The uncertainty of clinical examinations frequently leads to irregular observation intervals in longitudinal imaging data, posing challenges for modeling disease progression.Most existing imaging-based disease prediction models operate in Euclidean space, which assumes a flat representation of data and fails to fully capture the intrinsic continuity and nonlinear geometric structure of irregularly sampled longitudinal images. To address the challenge of modeling Alzheimers disease (AD) progression from irregularly sampled longitudinal structural Magnetic Resonance Imaging (sMRI) data, we propose a Riemannian manifold mapping, a Time-aware manifold Neural ordinary differential equation, and an Attention-based riemannian Gated recurrent unit (R-TNAG) framework. Our approach first projects features extracted from high-dimensional sMRI into a manifold space to preserve the intrinsic geometry of disease progression. On this representation, a time-aware Neural Ordinary Differential Equation (TNODE) models the continuous evolution of latent states between observations, while an Attention-based Riemannian Gated Recurrent Unit (ARGRU) adaptively integrates historical and current information to handle irregular intervals. This joint design improves temporal consistency and yields robust AD trajectory prediction under irregular sampling.Experimental results demonstrate that the proposed method consistently outperforms state-of-the-art models in both disease status prediction and cognitive score regression. Ablation studies verify the contributions of each module, highlighting their complementary roles in enhancing predictive accuracy. Moreover, the model exhibits stable performance across varying sequence lengths and missing data rates, indicating strong temporal generalizability. Cross-dataset validation further confirms its robustness and applicability in diverse clinical settings.
Align-cDAE: Alzheimer's Disease Progression Modeling with Attention-Aligned Conditional Diffusion Auto-Encoder
Department of Electrical Engineering, Indian Institute of Technology Madras, Chennai, India(电子工程系,印度理工学院马德拉斯,钦奈,印度);Sudha Gopalakrishnan Brain Centre, Indian Institute of Technology Madras, Chennai, India(苏达·戈帕拉克里希南脑中心,印度理工学院马德拉斯,钦奈,印度);Department of Electrical Engineering, Indian Institute of Technology Madras Chennai, India(电子工程系,印度理工学院马德拉斯钦奈,印度)
HIBMatch: Hypergraph Information Bottleneck for Semi-supervised Alzheimer's Progression
Department of Applied Mathematics and Theoretical Physics, University of Cambridge(应用数学与理论物理系,剑桥大学);Department of Biomedical Engineering, The Hong Kong Polytechnic University(生物医学工程系,香港理工大学);Research Institute for Artificial Intelligence of Things, The Hong Kong Polytechnic University(物联网人工智能研究所,香港理工大学);Yau Mathematical Sciences Centre, Tsinghua University(叶德平数学科学中心,清华大学)
We propose a method to predict the subject-specific longitudinal progression of brain structures extracted from baseline MRI, and evaluate its performance on Alzheimer's disease data. The disease progression is modeled as a trajectory on a group of diffeomorphisms in the context of large deformation diffeomorphic metric mapping (LDDMM). We first exhibit the limited predictive abilities of geodesic regression extrapolation on this group. Building on the recent concept of parallel curves in shape manifolds, we then introduce a second predictive protocol which personalizes previously learned traj…
Erasmus MC(伊拉斯姆斯大学医学中心);Delft University of Technology(代尔夫特理工大学)
The event-based model (EBM) for data-driven disease progression modeling estimates the sequence in which biomarkers for a disease become abnormal. This helps in understanding the dynamics of disease progression and facilitates early diagnosis by staging patients on a disease progression timeline. Existing EBM methods are all generative in nature. In this work we propose a novel discriminative approach to EBM, which is shown to be more accurate as well as computationally more efficient than existing state-of-the art EBM methods. The method first estimates for each subject an approximate orderin…
Perelman School of Medicine, University of Pennsylvania(宾夕法尼亚大学佩雷尔曼医学院)
Multi-modal biological, imaging, and neuropsychological markers have demonstrated promising performance for distinguishing Alzheimer's disease (AD) patients from cognitively normal elders. However, it remains difficult to early predict when and which mild cognitive impairment (MCI) individuals will convert to AD dementia. Informed by pattern classification studies which have demonstrated that pattern classifiers built on longitudinal data could achieve better classification performance than those built on cross-sectional data, we develop a deep learning model based on recurrent neural networks…
Graph Theory and GNNs to Unravel the Topographical Organization of Brain Lesions in Variants of Alzheimer's Disease Progression
Sorbonne Université(索邦大学);Paris Brain Institute - ICM(巴黎脑研究所 - ICM);CNRS(法国国家科学研究中心);Inria(法国国家信息与自动化研究所);Inserm(法国国家健康与医学研究院);AP-HP(巴黎公共医疗集团);Hôpital de la Pitié Salpêtrière(皮蒂-萨尔皮特里耶医院)
Introduction: It is challenging at baseline to predict when and which individuals who meet criteria for mild cognitive impairment (MCI) will ultimately progress to Alzheimer's disease (AD) dementia. Methods: A deep learning method is developed and validated based on MRI scans of 2146 subjects (803 for training and 1343 for validation) to predict MCI subjects' progression to AD dementia in a time-to-event analysis setting. Results: The deep learning time-to-event model predicted individual subjects' progression to AD dementia with a concordance index (C-index) of 0.762 on 439 ADNI testing MCI s…
Biomediq A/S(Biomediq公司);Cerebriu A/S(Cerebriu公司);University of Copenhagen(哥本哈根大学);University College London(伦敦大学学院);King’s College London(伦敦国王学院)
Quantitative characterization of disease progression using longitudinal data can provide long-term predictions for the pathological stages of individuals. This work studies the robust modeling of Alzheimer's disease progression using parametric methods. The proposed method linearly maps the individual's age to a disease progression score (DPS) and jointly fits constrained generalized logistic functions to the longitudinal dynamics of biomarkers as functions of the DPS using M-estimation. Robustness of the estimates is quantified using bootstrapping via Monte Carlo resampling, and the estimated…
Flexible Multimodal Neuroimaging Fusion for Alzheimer's Disease Progression Prediction
Department of Computer Science and Engineering(计算机科学与工程系);Department of Biomedical Informatics(生物医学信息学系);Department of Neurology(神经病学系);Translational Data Analytics Institute(转化数据分析研究所)
ImageFlowNet: Forecasting Multiscale Image-Level Trajectories of Disease Progression with Irregularly-Sampled Longitudinal Medical Images
Yale University(耶鲁大学);University of California, San Francisco(加州大学旧金山分校);Mila - Quebec AI Institute(魁北克AI研究所);Université de Montréal(蒙特利尔大学);McGill University(麦吉尔大学);Northern California Retina Vitreous Associates(北加州视网膜与玻璃体协会)
Columbia University(哥伦比亚大学);Imperial College(帝国理工学院)
In neuroimaging studies, the human cortex is commonly modeled as a sphere to preserve the topological structure of the cortical surface. Cortical neuroimaging measures hence can be modeled in spherical representation. In this work, we explore analyzing the human cortex using spherical CNNs in an Alzheimer's disease (AD) classification task using cortical morphometric measures derived from structural MRI. Our results show superior performance in classifying AD versus cognitively normal and in predicting MCI progression within two years, using structural MRI information only. This work demonstra…
Alzheimer's disease (AD) is known as one of the major causes of dementia and is characterized by slow progression over several years, with no treatments or available medicines. In this regard, there have been efforts to identify the risk of developing AD in its earliest time. While many of the previous works considered cross-sectional analysis, more recent studies have focused on the diagnosis and prognosis of AD with longitudinal or time series data in a way of disease progression modeling (DPM). Under the same problem settings, in this work, we propose a novel computational framework that ca…
Deformation-aware Temporal Generation for Early Prediction of Alzheimers Disease
the College of Computer Science and Technology,Huaqiao University(华侨大学计算机科学与技术学院);the Key Laboratory of Computer Vision and Machine Learning in Fujian Province(福建省计算机视觉与机器学习重点实验室)
Biomediq A/S(Biomediq公司);Cerebriu A/S(Cerebriu公司);University of Copenhagen(哥本哈根大学);University College London(伦敦大学学院);King’s College London(伦敦国王学院)
Disease progression modeling (DPM) using longitudinal data is a challenging machine learning task. Existing DPM algorithms neglect temporal dependencies among measurements, make parametric assumptions about biomarker trajectories, do not model multiple biomarkers jointly, and need an alignment of subjects' trajectories. In this paper, recurrent neural networks (RNNs) are utilized to address these issues. However, in many cases, longitudinal cohorts contain incomplete data, which hinders the application of standard RNNs and requires a pre-processing step such as imputation of the missing values…
Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences(中国科学院深圳先进技术研究院);Shenzhen University(深圳大学);Renmin University of China(中国人民大学);Harbin Engineering University(哈尔滨工程大学)
Multimodal neuroimage can provide complementary information about the dementia, but small size of complete multimodal data limits the ability in representation learning. Moreover, the data distribution inconsistency from different modalities may lead to ineffective fusion, which fails to sufficiently explore the intra-modal and inter-modal interactions and compromises the disease diagnosis performance. To solve these problems, we proposed a novel multimodal representation learning and adversarial hypergraph fusion (MRL-AHF) framework for Alzheimer's disease diagnosis using complete trimodal im…
Purpose Predicting the progression of MCI to Alzheimer's disease is an important step in reducing the progression of the disease. Therefore, many methods have been introduced for this task based on deep learning. Among these approaches, the methods based on ROIs are in a good position in terms of accuracy and complexity. In these techniques, some specific parts of the brain are extracted as ROI manually for all of the patients. Extracting ROI manually is time-consuming and its results depend on human expertness and precision. Method To overcome these limitations, we propose a novel smart metho…
Télécom SudParis, Institut Polytechnique de Paris(巴黎电信 SudParis,巴黎综合理工学院);University College London(伦敦大学学院);Digital Technologies and Artificial Intelligence Development Research Institute (AIRI)(数字技术与人工智能发展研究院(AIRI))
A Machine Learning Approach to Analyze the Effects of Alzheimer's Disease on Handwriting through Lognormal Features
University of Cassino and Southern Lazio(卡西诺和南拉齐奥大学);IDeTIC: Instituto para el Desarrollo Tecnológico y la Innovación en Comunicaciones(通信技术与创新发展研究所);Universidad de Las Palmas de Gran Canaria(大加那利岛拉斯帕尔马斯大学)
Cornell(康奈尔大学);Electrical and Computer Eng, Cornell(康奈尔大学电气与计算机工程学院)
In this work, we consider the problem of predicting the course of a progressive disease, such as cancer or Alzheimer's. Progressive diseases often start with mild symptoms that might precede a diagnosis, and each patient follows their own trajectory. Patient trajectories exhibit wild variability, which can be associated with many factors such as genotype, age, or sex. An additional layer of complexity is that, in real life, the amount and type of data available for each patient can differ significantly. For example, for one patient we might have no prior history, whereas for another patient we…
Alzheimer's Disease (AD) is a progressive neurodegenerative disease. Amnestic mild cognitive impairment (MCI) is a common first symptom before the conversion to clinical impairment where the individual becomes unable to perform activities of daily living independently. Although there is currently no treatment available, the earlier a conclusive diagnosis is made, the earlier the potential for interventions to delay or perhaps even prevent progression to full-blown AD. Neuroimaging scans acquired from MRI and metabolism images obtained by FDG-PET provide in-vivo view into the structure and func…
Early diagnosis of Alzheimer's disease (AD) is essential in preventing the disease's progression. Therefore, detecting AD from neuroimaging data such as structural magnetic resonance imaging (sMRI) has been a topic of intense investigation in recent years. Deep learning has gained considerable attention in Alzheimer's detection. However, training a convolutional neural network from scratch is challenging since it demands more computational time and a significant amount of annotated data. By transferring knowledge learned from other image recognition tasks to medical image classification, trans…
JSS Academy of Higher Education and Research(JSS高等教育与研究学院);University of Delhi(德里大学)
Early detection of Alzheimer disease is crucial for deploying interventions and slowing the disease progression. A lot of machine learning and deep learning algorithms have been explored in the past decade with the aim of building an automated detection for Alzheimer. Advancements in data augmentation techniques and advanced deep learning architectures have opened up new frontiers in this field, and research is moving at a rapid speed. Hence, the purpose of this survey is to provide an overview of recent research on deep learning models for Alzheimer disease diagnosis. In addition to categoriz…
Universidade de Pernambuco(伯南布哥大学);Universidade Federal de Pernambuco(伯南布哥联邦大学);North Carolina State University(北卡罗来纳州立大学)
Alzheimer's disease is the most common cause of dementia, yet difficult to accurately diagnose without the use of invasive techniques, particularly at the beginning of the disease. This work addresses the classification and analysis of multispectral synthetic images composed by diffusion-weighted magnetic resonance brain volumes for evaluation of the area of cerebrospinal fluid and its correlation with the progression of Alzheimer's disease. A 1.5 T MR imaging system was used to acquire all the images presented. The classification methods are based on multilayer perceptrons and classifiers of …
Robust forecasting of the future anatomical changes inflicted by an ongoing disease is an extremely challenging task that is out of grasp even for experienced healthcare professionals. Such a capability, however, is of great importance since it can improve patient management by providing information on the speed of disease progression already at the admission stage, or it can enrich the clinical trials with fast progressors and avoid the need for control arms by the means of digital twins. In this work, we develop a deep learning method that models the evolution of age-related disease by proce…
National Institute of Mental Health and Neurosciences (NIMHANS)(国家精神卫生与神经科学研究所(NIMHANS))
Alzheimer's Disease (AD) is the most widespread neurodegenerative disease, affecting over 50 million people across the world. While its progression cannot be stopped, early and accurate diagnostic testing can drastically improve quality of life in patients. Currently, only qualitative means of testing are employed in the form of scoring performance on a battery of cognitive tests. The inherent disadvantage of this method is that the burden of an accurate diagnosis falls on the clinician's competence. Quantitative methods like MRI scan assessment are inaccurate at best,due to the elusive nature…
The University of Sydney(悉尼大学);JD Explore Academy(京东探索研究院)
Mild cognitive impairment (MCI) conversion prediction, i.e., identifying MCI patients of high risks converting to Alzheimer's disease (AD), is essential for preventing or slowing the progression of AD. Although previous studies have shown that the fusion of multi-modal data can effectively improve the prediction accuracy, their applications are largely restricted by the limited availability or high cost of multi-modal data. Building an effective prediction model using only magnetic resonance imaging (MRI) remains a challenging research topic. In this work, we propose a multi-modal multi-instan…
Enhancing Early Alzheimer Disease Detection through Big Data and Ensemble Few-Shot Learning
Robotics and Internet of Things Laboratory, Prince Sultan University(王子苏大学机器人与物联网实验室);RIADI Laboratory, National School of Computer Science, University of Manouba(RIADI实验室,国家计算机科学学院,曼努巴大学)
Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences(中国科学院深圳先进技术研究院)
Cross-modal fusion of different types of neuroimaging data has shown great promise for predicting the progression of Alzheimer's Disease(AD). However, most existing methods applied in neuroimaging can not efficiently fuse the functional and structural information from multi-modal neuroimages. In this work, a novel cross-modal transformer generative adversarial network(CT-GAN) is proposed to fuse functional information contained in resting-state functional magnetic resonance imaging (rs-fMRI) and structural information contained in Diffusion Tensor Imaging (DTI). The developed bi-attention mech…
Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences(中国科学院深圳先进技术研究院);Shenzhen University(深圳大学);Renmin University of China(中国人民大学);Central South University(中南大学)
Alzheimer's disease is characterized by alterations of the brain's structural and functional connectivity during its progressive degenerative processes. Existing auxiliary diagnostic methods have accomplished the classification task, but few of them can accurately evaluate the changing characteristics of brain connectivity. In this work, a prior guided adversarial representation learning and hypergraph perceptual network (PGARL-HPN) is proposed to predict abnormal brain connections using triple-modality medical images. Concretely, a prior distribution from the anatomical knowledge is estimated…
Collaborative Attention and Consistent-Guided Fusion of MRI and PET for Alzheimer's Disease Diagnosis
School of Software Yunnan University(软件学院 云南大学);Department of Computer Science The University of Sheffield(计算机科学系 剑桥大学);Department of Computing Xian JiaoTong-Liverpool University(计算系 西交利物浦大学)
University College London(伦敦大学学院);Inria(法国国家信息与自动化研究所);Université Côte d'Azur(蔚蓝海岸大学)
Here we present DIVE: Data-driven Inference of Vertexwise Evolution. DIVE is an image-based disease progression model with single-vertex resolution, designed to reconstruct long-term patterns of brain pathology from short-term longitudinal data sets. DIVE clusters vertex-wise biomarker measurements on the cortical surface that have similar temporal dynamics across a patient population, and concurrently estimates an average trajectory of vertex measurements in each cluster. DIVE uniquely outputs a parcellation of the cortex into areas with common progression patterns, leading to a new signature…
Technical University Munich(慕尼黑工业大学);Ludwig Maximilians University Munich(慕尼黑大学);Johns Hopkins University(约翰斯·霍普金斯大学)
Alzheimer's disease (AD) is the most common cause of dementia. An early detection is crucial for slowing down the disease and mitigating risks related to the progression. While the combination of MRI and FDG-PET is the best image-based tool for diagnosis, FDG-PET is not always available. The reliable detection of Alzheimer's disease with only MRI could be beneficial, especially in regions where FDG-PET might not be affordable for all patients. To this end, we propose a multi-task method based on U-Net that takes T1-weighted MR images as an input to generate synthetic FDG-PET images and classif…
Brain-Aware Readout Layers in GNNs: Advancing Alzheimer's early Detection and Neuroimaging
AI Graduate School, Gwangju Institute of Science and Technology(光州科学技术院人工智能研究生院);Seoul St. Mary’s Hospital, College of Medicine, The Catholic University of Korea(韩国天主教大学医学院首尔圣玛丽医院);Yeouido St. Mary’s Hospital, College of Medicine, The Catholic University of Korea(韩国天主教大学医学院汝矣岛圣玛丽医院)