arXivDaily arXiv每日学术速递 周一至周五更新
arXiv周末暂无论文更新,休息一下吧,周末愉快~~
arXiv 2410.04543cs.LGcs.AImath.DGq-bio.BM
收藏

数据流形上的拉回流匹配

Pullback Flow Matching on Data Manifolds

KTH Royal Institute of Technology(皇家理工学院);University of Amsterdam(阿姆斯特丹大学);University of Cambridge(剑桥大学);University of California, Los Angeles(加州大学洛杉矶分校);Delft University of Technology(代尔夫特理工大学)

Friso de Kruiff, Erik Bekkers, Ozan Öktem, Carola-Bibiane Schönlieb, Willem Diepeveen

AI总结:

本文提出拉回流匹配(PFM)框架,利用拉回几何与等距学习在数据流形上实现高效生成与精确插值,在蛋白质数据上验证了生成特定性质新样本的能力。

摘要:

我们提出了拉回流匹配(PFM),一种用于数据流形上生成建模的新框架。与现有方法假设或学习受限的闭式流形映射来训练黎曼流匹配(RFM)模型不同,PFM利用拉回几何和等距学习来保留底层流形的几何结构,同时在潜在空间中实现高效生成和精确插值。该方法不仅便于在数据流形上实现闭式映射,还允许通过假设数据和潜在流形上的度量来设计潜在空间。通过神经微分方程增强等距学习,并提出一个可扩展的训练目标,我们获得了更适合插值的潜在空间,从而改善了流形学习和生成性能。我们通过合成数据、蛋白质动力学和蛋白质序列数据的应用展示了PFM的有效性,生成了具有特定性质的新型蛋白质。该方法在药物发现和材料科学中显示出巨大潜力,在这些领域中,生成具有特定性质的新样本备受关注。

英文摘要:

We propose Pullback Flow Matching (PFM), a novel framework for generative modeling on data manifolds. Unlike existing methods that assume or learn restrictive closed-form manifold mappings for training Riemannian Flow Matching (RFM) models, PFM leverages pullback geometry and isometric learning to preserve the underlying manifold's geometry while enabling efficient generation and precise interpolation in latent space. This approach not only facilitates closed-form mappings on the data manifold but also allows for designable latent spaces, using assumed metrics on both data and latent manifolds. By enhancing isometric learning through Neural ODEs and proposing a scalable training objective, we achieve a latent space more suitable for interpolation, leading to improved manifold learning and generative performance. We demonstrate PFM's effectiveness through applications in synthetic data, protein dynamics and protein sequence data, generating novel proteins with specific properties. This method shows strong potential for drug discovery and materials science, where generating novel samples with specific properties is of great interest.

机构、总结、中文摘要均由AI分析而来,可能存在错误,请以论文正文为准。

↑