LACOSTE: Exploiting stereo and temporal contexts for surgical instrument segmentation
School of Biomedical Engineering, Division of Life Sciences and Medicine, University of Science and Technology of China (USTC)(中国科学技术大学生命科学与医学部生物医学工程学院);Suzhou Institute for Advanced Research, USTC(中国科学技术大学苏州研究院);Key Laboratory of Precision and Intelligent Chemistry, USTC(中国科学技术大学精准与智能化学重点实验室)
Surgical instrument segmentation is instrumental to minimally invasive surgeries and related applications. Most previous methods formulate this task as single-frame-based instance segmentation while ignoring the natural temporal and stereo attributes of a surgical video. As a result, these methods are less robust against the appearance variation through temporal motion and view change. In this work, we propose a novel LACOSTE model that exploits Location-Agnostic COntexts in Stereo and TEmporal images for improved surgical instrument segmentation. Leveraging a query-based segmentation model as core, we design three performance-enhancing modules. Firstly, we design a disparity-guided feature propagation module to enhance depth-aware features explicitly. To generalize well for even only a monocular video, we apply a pseudo stereo scheme to generate complementary right images. Secondly, we propose a stereo-temporal set classifier, which aggregates stereo-temporal contexts in a universal way for making a consolidated prediction and mitigates transient failures. Finally, we propose a location-agnostic classifier to decouple the location bias from mask prediction and enhance the feature semantics. We extensively validate our approach on three public surgical video datasets, including two benchmarks from EndoVis Challenges and one real radical prostatectomy surgery dataset GraSP. Experimental results demonstrate the promising performances of our method, which consistently achieves comparable or favorable results with previous state-of-the-art approaches.
SurgPose: Generalisable Surgical Instrument Pose Estimation using Zero-Shot Learning and Stereo Vision
Department of Computing, Imperial College London(帝国理工学院计算系);Hamlyn Centre for Robotic Surgery, Department of Surgery and Cancer, Imperial College London(帝国理工学院外科与癌症部门机器人手术中心)
SurgeoNet: Realtime 3D Pose Estimation of Articulated Surgical Instruments from Stereo Images using a Synthetically-trained Network
German Research Center for Artificial Intelligence (DFKI)(德国人工智能研究中心(DFKI));University of Kaiserslautern-Landau (RPTU)(凯泽斯劳滕-兰道大学(RPTU));NUST-SEECS(国家科技大学工程与应用科学学院(NUST-SEECS));University of Prince Mugrin (UPM)(穆格林王子大学(UPM))
Mannheim University of Applied Sciences(曼海姆应用科学大学);Magdeburg University(马格德堡大学);Heidelberg University Hospital(海德堡大学医院)
Phantoms for surgical training are able to mimic cutting and suturing properties and patient-individual shape of organs, but lack a realistic visual appearance that captures the heterogeneity of surgical scenes. In order to overcome this in endoscopic approaches, hyperrealistic concepts have been proposed to be used in an augmented reality-setting, which are based on deep image-to-image transformation methods. Such concepts are able to generate realistic representations of phantoms learned from real intraoperative endoscopic sequences. Conditioned on frames from the surgical training process, …
TiS-TSL: Image-Label Supervised Surgical Video Stereo Matching via Time-Switchable Teacher-Student Learning
Wuhan National Laboratory for Optoelectronics, Huazhong University of Science and Technology(华中科技大学光电实验室);Wuhan United Imaging Surgical Co., Ltd.(武汉联合影像手术有限公司)
University of Michigan(密歇根大学);Imperial College London(帝国理工学院)
In stereoscope-based Minimally Invasive Surgeries (MIS), dense stereo matching plays an indispensable role in 3D shape recovery, AR, VR, and navigation tasks. Although numerous Deep Neural Network (DNN) approaches are proposed, the conventional prior-free approaches are still popular in the industry because of the lack of open-source annotated data set and the limitation of the task-specific pre-trained DNNs. Among the prior-free stereo matching algorithms, there is no successful real-time algorithm in none GPU environment for MIS. This paper proposes the first CPU-level real-time prior-free s…
Reconstruction of the soft tissues in robotic surgery from endoscopic stereo videos is important for many applications such as intra-operative navigation and image-guided robotic surgery automation. Previous works on this task mainly rely on SLAM-based approaches, which struggle to handle complex surgical scenes. Inspired by recent progress in neural rendering, we present a novel framework for deformable tissue reconstruction from binocular captures in robotic surgery under the single-viewpoint setting. Our framework adopts dynamic neural radiance fields to represent deformable surgical scenes…
City University of Hong Kong(香港城市大学);The Chinese University of Hong Kong(香港中文大学);Soochow University(苏州大学)
Objective: The computation of anatomical information and laparoscope position is a fundamental block of surgical navigation in Minimally Invasive Surgery (MIS). Recovering a dense 3D structure of surgical scene using visual cues remains a challenge, and the online laparoscopic tracking primarily relies on external sensors, which increases system complexity. Methods: Here, we propose a learning-driven framework, in which an image-guided laparoscopic localization with 3D reconstructions of complex anatomical structures is obtained. To reconstruct the 3D structure of the whole surgical environmen…
MV-dVRK: A Multi-Viewpoint Benchmark for Spatial Surgical Perception
Max Planck Institute for Intelligent Systems(马克斯·普朗克智能系统研究所);ETH Zürich(苏黎世联邦理工学院);Erbe Group(爱尔博集团);Tübingen University Hospital(蒂宾根大学医院);Johns Hopkins University(约翰霍普金斯大学)
The Hamlyn Centre for Robotic Surgery, IGHI, Imperial College London(伦敦帝国理工学院哈姆林机器人手术中心);Dyson Robotics Laboratory, Imperial College London(伦敦帝国理工学院戴森机器人实验室);OpenAI;Department of Surgery and Cancer, Imperial College London(伦敦帝国理工学院外科与癌症系)
Robotic surgery has become a powerful tool for performing minimally invasive procedures, providing advantages in dexterity, precision, and 3D vision, over traditional surgery. One popular robotic system is the da Vinci surgical platform, which allows preoperative information to be incorporated into live procedures using Augmented Reality (AR). Scene depth estimation is a prerequisite for AR, as accurate registration requires 3D correspondences between preoperative and intraoperative organ models. In the past decade, there has been much progress on depth estimation for surgical scenes, such as …
University of Michigan(密歇根大学);United Imaging Research Institute of Intelligent Imaging(联影智能影像研究院);Imperial College London(伦敦帝国理工学院)
This paper reports a CPU-level real-time stereo matching method for surgical images (10 Hz on 640 * 480 image with a single core of i5-9400). The proposed method is built on the fast ''dense inverse searching'' algorithm, which estimates the disparity of the stereo images. The overlapping image patches (arbitrary squared image segment) from the images at different scales are aligned based on the photometric consistency presumption. We propose a Bayesian framework to evaluate the probability of the optimized patch disparity at different scales. Moreover, we introduce a spatial Gaussian mixed pr…
SurgCUT3R: Surgical Scene-Aware Continuous Understanding of Temporal 3D Representation
The Hamlyn Centre for Robotic Surgery, Imperial College London(机器人手术中心,帝国理工学院伦敦分校);S-Lab, College of Computing and Data Science, Nanyang Technological University(S实验室, computing and Data Science学院,南洋理工大学);Department of Computer Science, University of Liverpool(计算机科学系,利物浦大学)
Wellcome/EPSRC Centre for Interventional and Surgical Sciences (WEISS), UCL(伦敦大学学院威康/EPSRC介入与外科科学中心);National Center for Tumor Diseases (NCT) Dresden(德累斯顿国家肿瘤疾病中心);German Cancer Research Center (DKFZ)(德国癌症研究中心)
In computer vision, reference datasets have been highly successful in promoting algorithmic development in stereo reconstruction. Surgical scenes gives rise to specific problems, including the lack of clear corner features, highly specular surfaces and the presence of blood and smoke. Publicly available datasets have been produced using CT and either phantom images or biological tissue samples covering a relatively small region of the endoscope field-of-view. We present a stereo-endoscopic reconstruction validation dataset based on CT (SERV-CT). Two {\it ex vivo} small porcine full torso cadav…
Tracking Any Point Methods for Markerless 3D Tissue Tracking in Endoscopic Stereo Images
Institute of Medical Technology and Intelligent Systems, Hamburg University of Technology(医学技术与智能系统研究所,汉堡技术大学);Department of Otorhinolaryngology, Head and Neck Surgery and Oncology, University Medical Center Hamburg-Eppendorf(耳鼻喉头颈外科与肿瘤学部,汉堡艾本多夫大学医学中心);Martini-Klinik Prostate Cancer Center, University Medical Center Hamburg-Eppendorf(马尔廷诊所前列腺癌中心,汉堡艾本多夫大学医学中心);Department of Urology, University Medical Center Hamburg-Eppendorf(泌尿外科,汉堡艾本多夫大学医学中心)
本文提出一种利用2D Tracking Any Point网络结合两个CoTracker模型实现内窥镜立体图像无标记3D组织追踪的新方法,实验验证了其在复杂手术场景中的准确性与潜力。
The Dresden Dataset for 4D Reconstruction of Non-Rigid Abdominal Surgical Scenes
Department of Translational Surgical Oncology, National Center for Tumor Diseases (NCT), NCT/UCC Dresden, a partnership between DKFZ, Faculty of Medicine and University Hospital Carl Gustav Carus, TUD Dresden University of Technology, and Helmholtz-Zentrum Dresden-Rossendorf (HZDR), Dresden, Germany(转化外科肿瘤中心部门,肿瘤疾病国家中心(NCT),NCT/UCC德累斯顿,由DKFZ、医学院和卡尔·戈斯瓦尔德·卡尔医院、德累斯顿技术大学以及德累斯顿-罗斯恩多夫赫尔姆霍兹中心(HZDR)组成的合作机构,德累斯顿,德国);Department of Translational Surgical Oncology, NCT/UCC Dresden, Faculty of Medicine and University Hospital Carl Gustav Carus, TUD Dresden University of Technology(转化外科肿瘤中心部门,NCT/UCC德累斯顿,医学院和卡尔·戈斯瓦尔德·卡尔医院,德累斯顿技术大学);Department for Visceral, Thoracic and Vascular Surgery, Faculty of Medicine and University Hospital Carl Gustav Carus, Technische Universität Dresden(visceral、胸腔和血管外科部门,医学院和卡尔·戈斯瓦尔德·卡尔医院,德累斯顿技术大学);Centre for Tactile Internet with Human-in-the-Loop (CeTI), Technical University Dresden(人机交互触觉互联网中心(CeTI),德累斯顿技术大学);Department of Computer Science and Engineering, The Chinese University of Hong Kong(计算机科学与工程部门,香港中文大学)
We introduce the task of stereo video reconstruction or, equivalently, 2D-to-3D video conversion for minimally invasive surgical video. We design and implement a series of end-to-end U-Net-based solutions for this task by varying the input (single frame vs. multiple consecutive frames), loss function (MSE, MAE, or perceptual losses), and network architecture. We evaluate these solutions by surveying ten experts - surgeons who routinely perform endoscopic surgery. We run two separate reader studies: one evaluating individual frames and the other evaluating fully reconstructed 3D video played on…
Tissue deformation during the surgery may significantly decrease the accuracy of surgical navigation systems. In this paper, we propose an approach to estimate the deformation of tissue surface from stereo videos in real-time, which is capable of handling occlusion, smooth surface and fast deformation. We first use a stereo matching method to extract depth information from stereo video frames and generate the tissue template, and then estimate the deformation of the obtained template by minimizing ICP, ORB feature matching and as-rigid-as-possible (ARAP) costs. The main novelties are twofold: …
Free-DyGS: Camera-Pose-Free Scene Reconstruction for Dynamic Surgical Videos with Gaussian Splatting
Department of Biomedical Engineering, National University of Singapore (NUS)(生物医学工程系,新加坡国立大学);National University of Singapore(新加坡国立大学);Yong Loo Lin School of Medicine, NUS(Yong Loo Lin医学院,新加坡国立大学);Department of Surgery, National University Hospital(国立大学医院外科部);Centre for Smart Health, The Hong Kong Polytechnic University(智能健康中心,香港理工大学)
More than Segmentation: Benchmarking SAM 3 for Segmentation, 3D Perception, and Reconstruction in Robotic Surgery
The Chinese University of Hong Kong(香港中文大学);The Hong Kong University of Science and Technology(香港科学与技术大学);The Hong Kong University of Science and Technology (Guangzhou)(香港科学与技术大学(广州));Technical University of Munich(慕尼黑技术大学)
A benchmark for video-based laparoscopic skill analysis and assessment
National Center for Tumor Diseases (NCT)(国家肿瘤疾病中心);University Hospital Carl Gustav Carus, TUD Dresden University of Technology(德累斯顿工业大学卡尔·古斯塔夫·卡鲁斯大学医院);TUD Dresden University of Technology(德累斯顿工业大学);Helmholtz-Zentrum Dresden-Rossendorf (HZDR)(德累斯顿-罗森多夫亥姆霍兹中心);The Centre for Tactile Internet with Human-in-the-Loop (CeTI)(人在环触觉互联网中心);Medical Faculty and University Hospital Carl Gustav Carus, TUD Dresden University of Technology(德累斯顿工业大学医学院暨卡尔·古斯塔夫·卡鲁斯大学医院);Municipal Hospital Dresden-Friedrichstadt(德累斯顿-弗里德里希施塔特市立医院)
Video streams are utilised to guide minimally-invasive surgery and diagnostic procedures in a wide range of procedures, and many computer assisted techniques have been developed to automatically analyse them. These approaches can provide additional information to the surgeon such as lesion detection, instrument navigation, or anatomy 3D shape modeling. However, the necessary image features to recognise these patterns are not always reliably detected due to the presence of irregular light patterns such as specular highlight reflections. In this paper, we aim at removing specular highlights from…