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arXiv 2311.10879eess.IVcs.CVcs.LG

用于增强肿瘤分割的对比剂注射前至注射后乳腺MRI合成

Pre- to Post-Contrast Breast MRI Synthesis for Enhanced Tumour Segmentation

Universitat de Barcelona(巴塞罗那大学);Helmholtz Center Munich(慕尼黑亥姆霍兹中心);Technical University of Munich(慕尼黑工业大学);Karolinska Institutet(卡罗林斯卡学院);King’s College London(伦敦国王学院)

Richard Osuala, Smriti Joshi, Apostolia Tsirikoglou, Lidia Garrucho, Walter H. L. Pinaya, Oliver Diaz, Karim Lekadir

AI总结:

本研究利用GAN将对比剂注射前乳腺MRI合成为注射后DCE-MRI,并引入SAMe指标评估合成数据,证明合成数据能通过数据增强有效提升3D乳腺肿瘤分割模型的鲁棒性。

摘要:

尽管对比剂在动态对比增强MRI(DCE-MRI)中对肿瘤检测和治疗有益,但其使用会带来一系列问题,包括有创性、生物蓄积以及引发肾源性系统性纤维化的风险。本研究探索了利用生成对抗网络(GAN),将对比剂注射前T1加权脂肪饱和乳腺MRI转换为对应的首次DCE-MRI序列,以生成合成对比增强的可行性。此外,我们引入了缩放聚合度量(SAMe),旨在以有原则的方式定量评估合成数据的质量,并作为选择最优生成模型的基础。我们使用定量图像质量指标评估生成的DCE-MRI数据,并将其应用于3D乳腺肿瘤分割的下游任务。结果表明,通过数据增强,对比剂注射后DCE-MRI的合成在提升乳腺肿瘤分割模型鲁棒性方面具有潜力。代码可在https://github.com/RichardObi/pre_post_synthesis获取。

英文摘要:

Despite its benefits for tumour detection and treatment, the administration of contrast agents in dynamic contrast-enhanced MRI (DCE-MRI) is associated with a range of issues, including their invasiveness, bioaccumulation, and a risk of nephrogenic systemic fibrosis. This study explores the feasibility of producing synthetic contrast enhancements by translating pre-contrast T1-weighted fat-saturated breast MRI to their corresponding first DCE-MRI sequence leveraging the capabilities of a generative adversarial network (GAN). Additionally, we introduce a Scaled Aggregate Measure (SAMe) designed for quantitatively evaluating the quality of synthetic data in a principled manner and serving as a basis for selecting the optimal generative model. We assess the generated DCE-MRI data using quantitative image quality metrics and apply them to the downstream task of 3D breast tumour segmentation. Our results highlight the potential of post-contrast DCE-MRI synthesis in enhancing the robustness of breast tumour segmentation models via data augmentation. Our code is available at https://github.com/RichardObi/pre_post_synthesis.

机构、总结、中文摘要均由AI分析而来,可能存在错误,请以论文正文为准。

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