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arXiv 2211.06522eess.IVcs.CVq-bio.QM

Deep Learning Generates Synthetic Cancer Histology for Explainability and Education

University of Chicago Medicine(芝加哥大学医学中心);Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai(西奈山伊坎医学院蒂施癌症研究所);Ghost Autonomy, Inc.(Ghost Autonomy 公司);University of Wisconsin at Madison(威斯康星大学麦迪逊分校);University of Chicago(芝加哥大学)
James M. Dolezal, Rachelle Wolk, Hanna M. Hieromnimon, Frederick M. Howard, Andrew Srisuwananukorn, Dmitry Karpeyev, Siddhi Ramesh, Sara Kochanny, Jung Woo Kwon… 展开作者

James M. Dolezal, Rachelle Wolk, Hanna M. Hieromnimon, Frederick M. Howard, Andrew Srisuwananukorn, Dmitry Karpeyev, Siddhi Ramesh, Sara Kochanny, Jung Woo Kwon, Meghana Agni, Richard C. Simon, Chandni Desai, Raghad Kherallah, Tung D. Nguyen, Jefree J. Schulte, Kimberly Cole, Galina Khramtsova, Marina Chiara Garassino, Aliya N. Husain, Huihua Li, Robert Grossman, Nicole A. Cipriani, Alexander T. Pearson

英文摘要:

Artificial intelligence methods including deep neural networks (DNN) can provide rapid molecular classification of tumors from routine histology with accuracy that matches or exceeds human pathologists. Discerning how neural networks make their predictions remains a significant challenge, but explainability tools help provide insights into what models have learned when corresponding histologic features are poorly defined. Here, we present a method for improving explainability of DNN models using synthetic histology generated by a conditional generative adversarial network (cGAN). We show that cGANs generate high-quality synthetic histology images that can be leveraged for explaining DNN models trained to classify molecularly-subtyped tumors, exposing histologic features associated with molecular state. Fine-tuning synthetic histology through class and layer blending illustrates nuanced morphologic differences between tumor subtypes. Finally, we demonstrate the use of synthetic histology for augmenting pathologist-in-training education, showing that these intuitive visualizations can reinforce and improve understanding of histologic manifestations of tumor biology.

机构、总结、中文摘要均由AI分析而来,可能存在错误,请以论文正文为准。

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