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arXiv 2211.04867eess.IVcs.CV
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无追踪器自由手超声:基于序列建模及过去与未来帧辅助变换

Trackerless freehand ultrasound with sequence modelling and auxiliary transformation over past and future frames

University College London(伦敦大学学院);Harbin Institute of Technology(哈尔滨工业大学);King’s College London(伦敦国王学院)

Qi Li, Ziyi Shen, Qian Li, Dean C Barratt, Thomas Dowrick, Matthew J Clarkson, Tom Vercauteren, Yipeng Hu

AI总结:

本研究提出利用前馈和递归神经网络,结合多任务学习,从过去和未来帧估计无追踪器自由手超声的三维变换,实验证明时空建模及辅助任务提升精度,且无需显式序列内损失。

摘要:

无追踪器的三维(3D)自由手超声(US)重建在许多临床应用中可能优于二维或带追踪器的对应方法。本文提出利用前馈和递归神经网络(RNNs),从过去和未来的二维图像中估计超声帧之间的三维空间变换。利用时间上可用的帧,进一步提出一种多任务学习算法,以利用它们之间大量辅助变换预测任务。在一项志愿者研究中,使用来自19名志愿者38个前臂的228次扫描所采集的超过40,000帧超声图像,基于光学追踪器提供的真实值,通过帧预测精度、体积重建重叠、累积跟踪误差和最终漂移来量化留出测试性能。结果表明,对时间-空间相关的输入帧及输出变换进行建模的重要性,且增加过去和/或未来帧可进一步改进。性能最佳的模型与预测中等间隔帧之间的变换相关,间隔小于十帧,帧率为每秒20帧(fps)。在预测变换超过一秒的帧上添加帧,无论是否使用基于LSTM的RNNs,观察到的益处很小。有趣的是,使用所提出的方法,显式的序列内损失(鼓励变换组合一致性或最小化累积误差)可能不再需要。实现代码和志愿者数据将公开提供,以确保可重复性和进一步研究。

英文摘要:

Three-dimensional (3D) freehand ultrasound (US) reconstruction without a tracker can be advantageous over its two-dimensional or tracked counterparts in many clinical applications. In this paper, we propose to estimate 3D spatial transformation between US frames from both past and future 2D images, using feed-forward and recurrent neural networks (RNNs). With the temporally available frames, a further multi-task learning algorithm is proposed to utilise a large number of auxiliary transformation-predicting tasks between them. Using more than 40,000 US frames acquired from 228 scans on 38 forearms of 19 volunteers in a volunteer study, the hold-out test performance is quantified by frame prediction accuracy, volume reconstruction overlap, accumulated tracking error and final drift, based on ground-truth from an optical tracker. The results show the importance of modelling the temporal-spatially correlated input frames as well as output transformations, with further improvement owing to additional past and/or future frames. The best performing model was associated with predicting transformation between moderately-spaced frames, with an interval of less than ten frames at 20 frames per second (fps). Little benefit was observed by adding frames more than one second away from the predicted transformation, with or without LSTM-based RNNs. Interestingly, with the proposed approach, explicit within-sequence loss that encourages consistency in composing transformations or minimises accumulated error may no longer be required. The implementation code and volunteer data will be made publicly available ensuring reproducibility and further research.

机构、总结、中文摘要均由AI分析而来,可能存在错误,请以论文正文为准。

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