There has been an increased interest in applying machine learning techniques on relational structured-data based on an observed graph. Often, this graph is not fully representative of the true relationship amongst nodes. In these settings, building a generative model conditioned on the observed graph allows to take the graph uncertainty into account. Various existing techniques either rely on restrictive assumptions, fail to preserve topological properties within the samples or are prohibitively expensive for larger graphs. In this work, we introduce the node copying model for constructing a distribution over graphs. Sampling of a random graph is carried out by replacing each node's neighbors by those of a randomly sampled similar node. The sampled graphs preserve key characteristics of the graph structure without explicitly targeting them. Additionally, sampling from this model is extremely simple and scales linearly with the nodes. We show the usefulness of the copying model in three tasks. First, in node classification, a Bayesian formulation based on node copying achieves higher accuracy in sparse data settings. Second, we employ our proposed model to mitigate the effect of adversarial attacks on the graph topology. Last, incorporation of the model in a recommendation system setting improves recall over state-of-the-art methods.
Graph convolutional neural networks (GCNN) have numerous applications in different graph based learning tasks. Although the techniques obtain impressive results, they often fall short in accounting for the uncertainty associated with the underlying graph structure. In the recently proposed Bayesian GCNN (BGCN) framework, this issue is tackled by viewing the observed graph as a sample from a parametric random graph model and targeting joint inference of the graph and the GCNN weights. In this paper, we introduce an alternative generative model for graphs based on copying nodes and incorporate i…
Representation learning for graphs enables the application of standard machine learning algorithms and data analysis tools to graph data. Replacing discrete unordered objects such as graph nodes by real-valued vectors is at the heart of many approaches to learning from graph data. Such vector representations, or embeddings, capture the discrete relationships in the original data by representing nodes as vectors in a high-dimensional space. In most applications graphs model the relationship between real-life objects and often nodes contain valuable meta-information about the original objects. W…
Sentrana Inc.（森特拉纳公司）；Imperial College London（伦敦帝国学院）
Computational intensity and sequential nature of estimation techniques for Bayesian methods in statistics and machine learning, combined with their increasing applications for big data analytics, necessitate both the identification of potential opportunities to parallelize techniques such as MCMC sampling, and the development of general strategies for mapping such parallel algorithms to modern CPUs in order to elicit the performance up the compute-based and/or memory-based hardware limits. Two opportunities for Single-Instruction Multiple-Data (SIMD) parallelization of MCMC sampling for probab…
Node embedding is a central topic in graph representation learning. Computational efficiency and scalability can be challenging to any method that requires full-graph operations. We propose sampling approaches to node embedding, with or without explicit modelling of the feature vector, which aim to extract useful information from both the eigenvectors related to the graph Laplacien and the given values associated with the graph.
Samsung Research（三星研究院）；Samsung Electronics, co.（三星电子）；New York University（纽约大学）
As an efficient and scalable graph neural network, GraphSAGE has enabled an inductive capability for inferring unseen nodes or graphs by aggregating subsampled local neighborhoods and by learning in a mini-batch gradient descent fashion. The neighborhood sampling used in GraphSAGE is effective in order to improve computing and memory efficiency when inferring a batch of target nodes with diverse degrees in parallel. Despite this advantage, the default uniform sampling suffers from high variance in training and inference, leading to sub-optimum accuracy. We propose a new data-driven sampling ap…
This paper is concerned by the problem of selecting an optimal sampling set of sensors over a network of time series for the purpose of signal recovery at non-observed sensors with a minimal reconstruction error. The problem is motivated by applications where time-dependent graph signals are collected over redundant networks. In this setting, one may wish to only use a subset of sensors to predict data streams over the whole collection of nodes in the underlying graph. A typical application is the possibility to reduce the power consumption in a network of sensors that may have limited battery…
The objective of unsupervised graph representation learning (GRL) is to learn a low-dimensional space of node embeddings that reflect the structure of a given unlabeled graph. Existing algorithms for this task rely on negative sampling objectives that maximize the similarity in node embeddings at nearby nodes (referred to as "cohesion") by maintaining positive and negative corpus of node pairs. While positive samples are drawn from node pairs that co-occur in short random walks, conventional approaches construct negative corpus by uniformly sampling random pairs, thus ignoring valuable informa…
We study, to the best of our knowledge, the first Bayesian algorithm for unimodal Multi-Armed Bandit (MAB) problems with graph structure. In this setting, each arm corresponds to a node of a graph and each edge provides a relationship, unknown to the learner, between two nodes in terms of expected reward. Furthermore, for any node of the graph there is a path leading to the unique node providing the maximum expected reward, along which the expected reward is monotonically increasing. Previous results on this setting describe the behavior of frequentist MAB algorithms. In our paper, we design a…
Graph representation learning has been extensively studied in recent years. Despite its potential in generating continuous embeddings for various networks, both the effectiveness and efficiency to infer high-quality representations toward large corpus of nodes are still challenging. Sampling is a critical point to achieve the performance goals. Prior arts usually focus on sampling positive node pairs, while the strategy for negative sampling is left insufficiently explored. To bridge the gap, we systematically analyze the role of negative sampling from the perspectives of both objective and ri…
Graph convolutional networks (GCNs) have recently received wide attentions, due to their successful applications in different graph tasks and different domains. Training GCNs for a large graph, however, is still a challenge. Original full-batch GCN training requires calculating the representation of all the nodes in the graph per GCN layer, which brings in high computation and memory costs. To alleviate this issue, several sampling-based methods have been proposed to train GCNs on a subset of nodes. Among them, the node-wise neighbor-sampling method recursively samples a fixed number of neighb…
Universitat de Barcelona（巴塞罗那大学）；Universidad Central de Ecuador（厄瓜多尔中央大学）；University of Sevilla（塞维利亚大学）
Network embedding techniques inspired by word2vec represent an effective unsupervised relational learning model. Commonly, by means of a Skip-Gram procedure, these techniques learn low dimensional vector representations of the nodes in a graph by sampling node-context examples. Although many ways of sampling the context of a node have been proposed, the effects of the way a node is chosen have not been analyzed in depth. To fill this gap, we have re-implemented the main four word2vec inspired graph embedding techniques under the same framework and analyzed how different sampling distributions …
University of Sheffield（谢菲尔德大学）；University of Nottingham（诺丁汉大学）
Graph convolutional network (GCN) is an emerging neural network approach. It learns new representation of a node by aggregating feature vectors of all neighbors in the aggregation process without considering whether the neighbors or features are useful or not. Recent methods have improved solutions by sampling a fixed size set of neighbors, or assigning different weights to different neighbors in the aggregation process, but features within a feature vector are still treated equally in the aggregation process. In this paper, we introduce a new convolution operation on regular size feature maps…
We consider the problem of offline, pool-based active semi-supervised learning on graphs. This problem is important when the labeled data is scarce and expensive whereas unlabeled data is easily available. The data points are represented by the vertices of an undirected graph with the similarity between them captured by the edge weights. Given a target number of nodes to label, the goal is to choose those nodes that are most informative and then predict the unknown labels. We propose a novel framework for this problem based on our recent results on sampling theory for graph signals. A graph si…
UC San Diego（加州大学圣地亚哥分校）；CentraleSupélec（巴黎中央理工-高等电力学院）；Inria Saclay（法国国家信息与自动化研究所萨克莱分院）
Network embedding algorithms are able to learn latent feature representations of nodes, transforming networks into lower dimensional vector representations. Typical key applications, which have effectively been addressed using network embeddings, include link prediction, multilabel classification and community detection. In this paper, we propose BiasedWalk, a scalable, unsupervised feature learning algorithm that is based on biased random walks to sample context information about each node in the network. Our random-walk based sampling can behave as Breath-First-Search (BFS) and Depth-First-S…
Southern University of Science and Technology（南方科技大学）
The topological information is essential for studying the relationship between nodes in a network. Recently, Network Representation Learning (NRL), which projects a network into a low-dimensional vector space, has been shown their advantages in analyzing large-scale networks. However, most existing NRL methods are designed to preserve the local topology of a network, they fail to capture the global topology. To tackle this issue, we propose a new NRL framework, named HSRL, to help existing NRL methods capture both the local and global topological information of a network. Specifically, HSRL re…
The present work deals with active sampling of graph nodes representing training data for binary classification. The graph may be given or constructed using similarity measures among nodal features. Leveraging the graph for classification builds on the premise that labels across neighboring nodes are correlated according to a categorical Markov random field (MRF). This model is further relaxed to a Gaussian (G)MRF with labels taking continuous values - an approximation that not only mitigates the combinatorial complexity of the categorical model, but also offers optimal unbiased soft predictor…
Bypassing Skip-Gram Negative Sampling: Dimension Regularization as a More Efficient Alternative for Graph Embeddings
Northeastern University（东北大学）；Khoury College of Computer Sciences（计算机科学学院）；Amazon AWS（亚马逊AWS）；San Francisco CA USA（旧金山CA美国）；Network Science Institute（网络科学研究所）；Stanford University（斯坦福大学）；Management Science & Engineering（管理科学与工程）；Stanford CA USA（斯坦福CA美国）
本文提出用维度正则化替代 Skip-Gram 负采样来防止图嵌入坍缩，并构建算法增强框架以提升 LINE 和 node2vec 的可扩展性，在保持链路预测性能的同时显著降低 GPU 内存占用和训练时间。
A fundamental task in kernel methods is to pick nodes and weights, so as to approximate a given function from an RKHS by the weighted sum of kernel translates located at the nodes. This is the crux of kernel density estimation, kernel quadrature, or interpolation from discrete samples. Furthermore, RKHSs offer a convenient mathematical and computational framework. We introduce and analyse continuous volume sampling (VS), the continuous counterpart -- for choosing node locations -- of a discrete distribution introduced in (Deshpande & Vempala, 2006). Our contribution is theoretical: we prove al…
BLISS: Bandit Layer Importance Sampling Strategy for Efficient Training of Graph Neural Networks
Wilfrid Laurier University（威尔弗里德·劳里埃大学）；Waterloo, Ontario, Canada（加拿大安大略省温哥华）；Singapore Management University（新加坡管理学院）；Georgia Institute of Technology（佐治亚理工学院）
While many statistical models and methods are now available for network analysis, resampling network data remains a challenging problem. Cross-validation is a useful general tool for model selection and parameter tuning, but is not directly applicable to networks since splitting network nodes into groups requires deleting edges and destroys some of the network structure. Here we propose a new network resampling strategy based on splitting node pairs rather than nodes applicable to cross-validation for a wide range of network model selection tasks. We provide a theoretical justification for our…
The paper provides statistical theory and intuition for personalized PageRank (called "PPR"): a popular technique that samples a small community from a massive network. We study a setting where the entire network is expensive to obtain thoroughly or to maintain, but we can start from a seed node of interest and "crawl" the network to find other nodes through their connections. By crawling the graph in a designed way, the PPR vector can be approximated without querying the entire massive graph, making it an alternative to snowball sampling. Using the degree-corrected stochastic block model, we …
