Diffeomorphic deformable image registration is one of the crucial tasks in medical image analysis, which aims to find a unique transformation while preserving the topology and invertibility of the transformation. Deep convolutional neural networks (CNNs) have yielded well-suited approaches for image registration by learning the transformation priors from a large dataset. The improvement in the performance of these methods is related to their ability to learn information from several sample medical images that are difficult to obtain and bias the framework to the specific domain of data. In this paper, we propose a novel diffeomorphic training-free approach; this is built upon the principle of an ordinary differential equation.
Our formulation yields an Euler integration type recursive scheme to estimate the changes of spatial transformations between the fixed and the moving image pyramids at different resolutions. The proposed architecture is simple in design. The moving image is warped successively at each resolution and finally aligned to the fixed image; this procedure is recursive in a way that at each resolution, a fully convolutional network (FCN) models a progressive change of deformation for the current warped image. The entire system is end-to-end and optimized for each pair of images from scratch. In comparison to learning-based methods, the proposed method neither requires a dedicated training set nor suffers from any training bias. We evaluate our method on three cardiac image datasets. The evaluation results demonstrate that the proposed method achieves state-of-the-art registration accuracy while maintaining desirable diffeomorphic properties.
Learning Deformable Image Registration from Optimization: Perspective, Modules, Bilevel Training and Beyond
Dalian University of Technology(大连理工大学);Guilin University of Electronic Technology(桂林电子科技大学);Children’s Hospital of Philadelphia(费城儿童医院);University of Pennsylvania(宾夕法尼亚大学)
CortexMorph: fast cortical thickness estimation via diffeomorphic registration using VoxelMorph
Support Center for Advanced Neuroimaging (SCAN)(高级神经影像支持中心(SCAN));University Institute of Diagnostic and Interventional Neuroradiology(诊断与介入神经放射学大学研究所);Inselspital, Bern University Hospital(伯尔尼大学医院 Inselspital)
Unsupervised learning of spatially varying regularization for diffeomorphic image registration
Department of Radiology and Radiological Science, Johns Hopkins School of Medicine, MD, USA(放射科与放射科学系,约翰霍普金斯医学院,马里兰州,美国);Image Analysis and Communications Laboratory, Department of Electrical and Computer Engineering, Johns Hopkins University, MD, USA(图像分析与通信实验室,电气与计算机工程系,约翰霍普金斯大学,马里兰州,美国);Department of Electrical and Computer Engineering, Vanderbilt University, TN, USA(电气与计算机工程系,范德比尔特大学,田纳西州,美国);NVIDIA Corporation, Santa Clara, CA, USA(英伟达公司,圣克拉拉,加利福尼亚州,美国)
Quicksilver: Fast Predictive Image Registration - a Deep Learning Approach
University of North Carolina at Chapel Hill(北卡罗来纳大学教堂山分校);Biomedical Research Imaging Center (BRIC)(生物医学研究成像中心);UNC Chapel Hill(北卡罗来纳大学教堂山分校);University of Salzburg(萨尔茨堡大学)
School of Artificial Intelligence and Robotics, Hunan University(人工智能与机器人学院,湖南大学);Cornell University(康奈尔大学);Department of Electrical and Computer Engineering, Johns Hopkins University(电气与计算机工程系,约翰霍普金斯大学);Department of Electrical and Computer Engineering, National University of Singapore(电气与计算机工程系,国立新加坡大学)
Anatomy-aware and acquisition-agnostic joint registration with SynthMorph
Athinoula A. Martinos Center for Biomedical Imaging(阿西努拉·A·马蒂诺斯生物医学成像中心);Department of Radiology, Massachusetts General Hospital(麻省总医院放射科);Department of Radiology, Harvard Medical School(哈佛医学院放射科);Computer Science & Artificial Intelligence Laboratory, Massachusetts Institute of Technology(麻省理工学院计算机科学与人工智能实验室)