We investigate the effect of mobile polymer brushes on proteins embedded in biological membranes by employing both Asakura-Oosawa type of theoretical model and coarse-grained molecular dynamics simulations. The brush polymer-induced depletion attraction between proteins changes non-monotonically with the size of brush. The depletion interaction, which is determined by the ratio of protein size to the grafting distance between brush polymers, increases linearly with brush size as long as the polymer brush height is shorter than the protein size. When the brush height exceeds the protein size, however, the depletion attraction among proteins is slightly reduced. We also explore the possibility of brush polymer-induced assembly of a large protein cluster, which can be related to one of many molecular mechanisms underlying recent experimental observations of integrin nanocluster formation and signaling.
Recent experiments have shown that trivalent ion, spermidine$^{3+}$, can provoke lateral microphase segregation in DNA brushes. Using molecular simulations and simple theoretical arguments, we explore the effects of trivalent counterions on polyelectrolyte brushes. At a proper range of grafting density, polymer size, and ion concentration, the brush polymers collapse heterogeneously into octopus-like surface micelles. Remarkably, the heterogeneity in brush morphology is maximized and the relaxation dynamics of chain and condensed ion are the slowest at the 1:3 stoichiometric concentration of t…
We grafted polyacrylic acid brushes containing cysteine side chains at a defined surface density on planar lipid membranes. Specular X-ray reflectivity data indicated that the addition of Cd2+ ions induces the compaction of the polymer brush layer and modulates the adhesion of lipid vesicles. The critical threshold level inducing the switch from non-wetting to partial wetting state, [Cd2+] = 0.25 mM, was determined by microinterferometry. The interactions between vesicles and brushes were evaluated by height fluctuations of the membrane in contact with brushes and the shape of vesicles near th…
We investigate the interaction energy between two colloidal particles on or immersed in nonadsorbing polymer brushes grafted onto the substrate as a function of the separation of the particles by use of self-consistent field theory calculation. Depending on the colloidal size and the penetration depth, we demonstrate an existence of repulsive energy barrier of several $k_{B}T$, which can be interpreted by separating the interaction energy into three parts: colloids-polymer interfacial energy, entropic contribution due to ``depletion zone" overlap of colloidal particles, and entropically elasti…
From glycosylated cell surfaces to sterically stabilized liposomes, polymers attached to membranes attract biological and therapeutic interest. Can the scaling laws of polymer "brushes" describe the physical properties of these coats? We delineate conditions where the Alexander - de Gennes theory of polymer brushes successfully describes the intermembrane distance vs. applied osmotic stress data of Kenworthy et al. for PEG-grafted multilamellar liposomes [Biophys. J. (1995) 68:1921]. We establish that the polymer density and size in the brush must be high enough that, in a bulk solution of equ…
We consider a theoretical model for the chiral smectic A twisted ribbons observed in assemblies of fd viruses condensed by depletion forces. The depletion interaction is modeled by an edge energy assumed to be proportional to the depletant polymer in solution. Our model is based on the Helfrich energy for surface bending and the de Gennes model of chiral smectic A liquid crystals with twist penetration at the edge. We consider two variants of this model, one with the conventional Helfrich Gaussian curvature term, and a second with saddle-splay energy. A mean field analysis of both models yield…
We investigate effective interactions between a colloidal particle, immersed in a binary mixture of smaller spheres, and a semipermeable membrane. The colloid is modeled as a big hard sphere and the membrane is represented as an infinitely thin surface which is fully permeable to one of the smaller spheres and impermeable to the other one. Within the framework of the density functional theory we evaluate the depletion potentials, and we consider two different approximate theories - the simple Asakura-Oosawa approximation and the accurate White-Bear version of the fundamental measure theory. Th…
We identify a class of composite membranes: fluid bilayers coupled to an elastic meshwork, that are such that the meshwork's energy is a function $F_\mathrm{el}[A_ξ]$ \textit{not} of the real microscopic membrane area $A$, but of a \textit{smoothed} membrane's area $A_ξ$, which corresponds to the area of the membrane coarse-grained at the mesh size $ξ$. We show that the meshwork modifies the membrane tension $σ$ both below and above the scale $ξ$, inducing a tension-jump $Δσ=dF_\mathrm{el}/dA_ξ$. The predictions of our model account for the fluctuation spectrum of red blood cells membranes cou…
Membrane-fluctuation-induced attraction between ligand--receptor sites binding neighboring membranes is studied using meshless membrane simulations and the Weil--Farago two-dimensional lattice model. For the adhesion sites binding two membranes, this entropic interaction is too weak by itself for the adhesion sites to form a large stable domain. However, it is found that this attraction is enhanced sufficiently to induce large domains either when the sites bind three or more neighboring membranes together or have anchors that harden surrounding membranes. The latter effect is understood by the…
The depletion interaction mediated by non-adsorbing polymers promotes condensation and assembly of repulsive colloidal particles into diverse higher-order structures and materials. One example, with particularly rich emergent behaviors, is the formation of two-dimensional colloidal membranes from a suspension of filamentous $\it{fd}$ viruses, which act as rods with effective repulsive interactions, and dextran, which acts as a condensing, depletion-inducing agent. Colloidal membranes exhibit chiral twist even when the constituent virus mixture lacks macroscopic chirality, change from a circula…
Molecular dynamics simulations are used to study the equilibrium distribution of monovalent ions in a nanopore connecting two water reservoirs separated by a membrane, both for the empty pore and that with a single stranded DNA molecule inside. In the presence of DNA, the counterions condense on the stretched macromolecule effectively neutralizing it, and nearly complete depletion of coions from the pore is observed. The implications of our results for experiments on DNA translocation through alpha-hemolysin nanopores are discussed.
Colloidal membranes, self assembled monolayers of aligned rod like molecules, offer a template for designing membranes with definite shapes and curvature, and possibly new functionalities in the future. Often the constituent rods, due to their molecular chirality, are tilted with respect to the membrane normal. Spatial patterns of this tilt on curved membranes result from a competition among depletion forces, nematic interaction, molecular chirality and boundary effects. We present a covariant theory for the tilt pattern on minimal surfaces, like helicoids and catenoids, which have been genera…
Entropy-Driven Initiation and Cytoskeletal Viscoelasticity in Endocytosis: An Onsager Variational Framework
Institute of Theoretical Physics, Chinese Academy of Sciences（中国科学院理论物理研究所）；Zhejiang Key Laboratory of Soft Matter Biomedical Materials, Wenzhou Institute, University of Chinese Academy of Sciences（温州研究院，中国科学院大学，浙江省软物质生物医用材料重点实验室）
We report results from the molecular dynamics simulations of a binary colloidal mixture subjected to an external potential barrier along one of the spatial directions at low volume fraction, ϕ = 0.2. The variations in the asymmetry of the external potential barrier do not change the dynamics of the smaller particles, showing Arrhenius diffusion. However, the dynamics of the larger particles shows a crossover from sub-Arrhenius to super-Arrhenius diffusion with the asymmetry in the external potential at the low temperatures and low volume fraction. Super-Arrhenius diffusion is generally observe…
We elucidate the molecular forces leading to assembly of two dimensional membrane-like structures composed of a one rod-length thick monolayer of aligned rods from an immiscible suspension of hard rods and depleting polymers. We perform simulations which predict that monolayer membranes are thermodynamically stable above a critical rod aspect ratio and below a critical depletion interaction length scale. Outside of these conditions alternative structures such as stacked smectic columns or nematic droplets are thermodynamically stable. These predictions are confirmed using an experimental model…
We characterize the role of charge correlations in the adsorption of a short, rod-like anionic polyelectrolyte onto a similarly charged membrane. Our theory reveals two different mechanisms driving the like-charge polyelectrolyte-membrane complexation: in weakly charged membranes, repulsive polyelectrolyte-membrane interactions lead to the interfacial depletion and a parallel orientation of the polyelectrolyte with respect to the membrane; while in the intermediate membrane charge regime, the interfacial counterion excess gives rise to an attractive "salt-induced" image force. This furthermore…
The permeability of certain polymer membranes with impenetrable nanoinclusions increases with the particle volume fraction (Merkel et al., Science, 296, 2002). This intriguing observation contradicts even qualitative expectations based on Maxwell's classical theory of conduction/diffusion in composites with homogeneous phases. This letter presents a simple theoretical interpretation based on classical models of diffusion and polymer physics. An essential feature of the theory is a polymer-segment depletion layer at the inclusion-polymer interface. The accompanying increase in free volume leads…
Possible mechanisms for over-limiting current (OLC) through aqueous ion-exchange membranes (exceeding diffusion limitation) have been debated for half a century. Flows consistent with electro-osmotic instability (EOI) have recently been observed in microfluidic experiments, but the existing theory neglects chemical effects and remains to be quantitatively tested. Here, we show that charge regulation and water self-ionization can lead to OLC by "current-induced membrane discharge" (CIMD), even in the absence of fluid flow. Salt depletion leads to a large electric field which expels water co-ion…
Field-theoretical method is efficient in predicting the assembling structures of polymeric systems. However, for the polymer/nanoparticle mixture, the continuous density description is not suitable to capture the realistic assembly of particles, especially when the size of particle is much larger than the polymer segment. Here, we developed a field-based model, in which the particles are eventually discrete and hence it can overcome the drawbacks of the conventional field descriptions, e.g., inadequate and crude treatment on the polymer-particle interface and the excluded-volume interaction. W…
