We investigate the parameter estimation of regression models with fixed group effects, when the group variable is missing while group related variables are available. This problem involves clustering to infer the missing group variable based on the group related variables, and regression to build a model on the target variable given the group and eventually additional variables. Thus, this problem can be formulated as the joint distribution modeling of the target and of the group related variables. The usual parameter estimation strategy for this joint model is a two-step approach starting by learning the group variable (clustering step) and then plugging in its estimator for fitting the regression model (regression step). However, this approach is suboptimal (providing in particular biased regression estimates) since it does not make use of the target variable for clustering. Thus, we claim for a simultaneous estimation approach of both clustering and regression, in a semi-parametric framework. Numerical experiments illustrate the benefits of our proposition by considering wide ranges of distributions and regression models. The relevance of our new method is illustrated on real data dealing with problems associated with high blood pressure prevention.
The paper exposes a non-parametric approach to latent and co-latent modeling of bivariate data, based upon alternating minimization of the Kullback-Leibler divergence (EM algorithm) for complete log-linear models. For categorical data, the iterative algorithm generates a soft clustering of both rows and columns of the contingency table. Well-known results are systematically revisited, and some variants are presumably original. In particular, the consideration of square contingency tables induces a clustering algorithm for weighted networks, differing from spectral clustering or modularity maxi…
In the framework of model-based clustering, a model, called multi-partitions clustering, allowing several latent class variables has been proposed. This model assumes that the distribution of the observed data can be factorized into several independent blocks of variables, each block following its own mixture model. In this paper, we assume that each block follows a non parametric latent class model, {\it i.e.} independence of the variables in each component of the mixture with no parametric assumption on their class conditional distribution. The purpose is to deduce, from the observation of a…
We are concerned in clustering continuous data sets subject to non-ignorable missingness. We perform clustering with a specific semi-parametric mixture, under the assumption of conditional independence given the component. The mixture model isused for clustering and not for estimating the density of the full variables (observed and unobserved), thus we do not need other assumptions on the component distribution neither to specify the missingness mechanism. Estimation is performed by maximizing an extension of smoothed likelihood allowing missingness. This optimization is achieved by a Majoriza…
There are two notoriously hard problems in cluster analysis, estimating the number of clusters, and checking whether the population to be clustered is not actually homogeneous. Given a dataset, a clustering method and a cluster validation index, this paper proposes to set up null models that capture structural features of the data that cannot be interpreted as indicating clustering. Artificial datasets are sampled from the null model with parameters estimated from the original dataset. This can be used for testing the null hypothesis of a homogeneous population against a clustering alternative…
The clustering for functional data with misaligned problems has drawn much attention in the last decade. Most methods do the clustering after those functional data being registered and there has been little research using both functional and scalar variables. In this paper, we propose a simultaneous registration and clustering (SRC) model via two-level models, allowing the use of both types of variables and also allowing simultaneous registration and clustering. For the data collected from subjects in different unknown groups, a Gaussian process functional regression model with time warping is…
A limitation of many clustering algorithms is the requirement to tune adjustable parameters for each application or even for each dataset. Some techniques require an \emph{a priori} estimate of the number of clusters while density-based techniques usually require a scale parameter. Other parametric methods, such as mixture modeling, make assumptions about the underlying cluster distributions. Here we introduce a non-parametric clustering method that does not involve tunable parameters and only assumes that clusters are unimodal, in the sense that they have a single point of maximal density whe…
Estimating the number of clusters (K) is a critical and often difficult task in cluster analysis. Many methods have been proposed to estimate K, including some top performers using resampling approach. When performing cluster analysis in high-dimensional data, simultaneous clustering and feature selection is needed for improved interpretation and performance. To our knowledge, none has investigated simultaneous estimation of K and feature selection in an exploratory cluster analysis. In this paper, we propose a resampling method to meet this gap and evaluate its performance under the sparse K-…
University of Ljubljana（卢布尔雅那大学）；Slovenian Environment Agency（斯洛文尼亚环境署）；Tampere University（坦佩雷大学）
We investigate a novel non-parametric regression-based clustering algorithm for longitudinal data analysis. Combining natural cubic splines with Gaussian mixture models (GMM), the algorithm can produce smooth cluster means that describe the underlying data well. However, there are some shortcomings in the algorithm: high computational complexity in the parameter estimation procedure and a numerically unstable variance estimator. Therefore, to further increase the usability of the method, we incorporated approaches to reduce its computational complexity, we developed a new, more stable variance…
We propose a clustering procedure to group K populations into subgroups with the same dependence structure. The method is adapted to paired population and can be used with panel data. It relies on the differences between orthogonal projection coefficients of the K density copulas estimated from the K populations. Each cluster is then constituted by populations having significantly similar dependence structures. A recent test statistic from Ngounou-Bakam and Pommeret (2022) is used to construct automatically such clusters. The procedure is data driven and depends on the asymptotic level of the …
A new depth-based clustering procedure for directional data is proposed. Such method is fully non-parametric and has the advantages to be flexible and applicable even in high dimensions when a suitable notion of depth is adopted. The introduced technique is evaluated through an extensive simulation study. In addition, a real data example in text mining is given to explain its effectiveness in comparison with other existing directional clustering algorithms.
The literature on clustering for continuous data is rich and wide; differently, that one developed for categorical data is still limited. In some cases, the problem is made more difficult by the presence of noise variables/dimensions that do not contain information about the clustering structure and could mask it. The aim of this paper is to propose a model for simultaneous clustering and dimensionality reduction of ordered categorical data able to detect the discriminative dimensions discarding the noise ones. Following the underlying response variable approach, the observed variables are con…
The identification of different homogeneous groups of observations and their appropriate analysis in PLS-SEM has become a critical issue in many appli- cation fields. Usually, both SEM and PLS-SEM assume the homogeneity of all units on which the model is estimated, and approaches of segmentation present in literature, consist in estimating separate models for each segments of statistical units, which have been obtained either by assigning the units to segments a priori defined. However, these approaches are not fully accept- able because no causal structure among the variables is postulated. I…
In this paper, we consider Bayesian methods for non-parametric quantile regressions with multiple continuous predictors ranging values in the unit interval. In the first method, the quantile function is assumed to be smooth over the explanatory variable and is expanded in tensor product of B-spline basis functions. While in the second method, the distribution function is assumed to be smooth over the explanatory variable and is expanded in tensor product of B-spline basis functions. Unlike other existing methods of non-parametric quantile regressions, the proposed methods estimate the whole qu…
Cluster analysis is an unsupervised learning strategy that can be employed to identify subgroups of observations in data sets of unknown structure. This strategy is particularly useful for analyzing high-dimensional data such as microarray gene expression data. Many clustering methods are available, but it is challenging to determine if the identified clusters represent distinct subgroups. We propose a novel strategy to investigate the significance of identified clusters by comparing the within- cluster sum of squares from the original data to that produced by clustering an appropriate unimoda…
A novel non-parametric estimator of the correlation between grouped measurements of a quantity is proposed in the presence of noise. This work is primarily motivated by functional brain network construction from fMRI data, where brain regions correspond to groups of spatial units, and correlation between region pairs defines the network. The challenge resides in the fact that both noise and intra-regional correlation lead to inconsistent inter-regional correlation estimation using classical approaches. While some existing methods handle either one of these issues, no non-parametric approaches …
We propose a non-parametric method to cluster mixed data containing both continuous and discrete random variables. The product space of continuous and categorical sample spaces is approximated locally by analyzing neighborhoods with cluster patterns. Detection of cluster patterns on the product space is determined by using a modified Chi-square test. The proposed method does not impose a global distance function which could be difficult to specify in practice. Results from simulation studies have shown that our proposed methods out-performed the benchmark method, AutoClass, for various setting…
Clustering methods are a valuable tool for the identification of patterns in high dimensional data with applications in many scientific problems. However, quantifying uncertainty in clustering is a challenging problem, particularly when dealing with High Dimension Low Sample Size (HDLSS) data. We develop here a U-statistics based clustering approach that assesses statistical significance in clustering and is specifically tailored to HDLSS scenarios. These non-parametric methods rely on very few assumptions about the data, and thus can be applied to a wide range of datasets for which the euclid…
In this paper, we study different discrete data clustering methods, which use the Model-Based Clustering (MBC) framework with the Multinomial distribution. Our study comprises several relevant issues, such as initialization, model estimation and model selection. Additionally, we propose a novel MBC method by efficiently combining the partitional and hierarchical clustering techniques. We conduct experiments on both synthetic and real data and evaluate the methods using accuracy, stability and computation time. Our study identifies appropriate strategies to be used for discrete data analysis wi…
Graphical models play an important role in neuroscience studies, particularly in brain connectivity analysis. Typically, observations/samples are from several heterogenous groups and the group membership of each observation/sample is unavailable, which poses a great challenge for graph structure learning. In this article, we propose a method which can achieve Simultaneous Clustering and Estimation of Heterogeneous Graphs (briefly denoted as SCEHG) for matrix-variate function Magnetic Resonance Imaging (fMRI) data. Unlike the conventional clustering methods which rely on the mean differences of…
University of Florida Informatics Institute（佛罗里达大学信息学研究所）；Rice University（莱斯大学）
Clustering is a ubiquitous problem in data science and signal processing. In many applications where we observe noisy signals, it is common practice to first denoise the data, perhaps using wavelet denoising, and then to apply a clustering algorithm. In this paper, we develop a sparse convex wavelet clustering approach that simultaneously denoises and discovers groups. Our approach utilizes convex fusion penalties to achieve agglomeration and group-sparse penalties to denoise through sparsity in the wavelet domain. In contrast to common practice which denoises then clusters, our method is a un…
Water pollution is a major global environmental problem, and it poses a great environmental risk to public health and biological diversity. This work is motivated by assessing the potential environmental threat of coal mining through increased sulfate concentrations in river networks, which do not belong to any simple parametric distribution. However, existing network models mainly focus on binary or discrete networks and weighted networks with known parametric weight distributions. We propose a principled nonparametric weighted network model based on exponential-family random graph models and…
Clustering in high-dimensional spaces is nowadays a recurrent problem in many scientific domains but remains a difficult task from both the clustering accuracy and the result understanding points of view. This paper presents a discriminative latent mixture (DLM) model which fits the data in a latent orthonormal discriminative subspace with an intrinsic dimension lower than the dimension of the original space. By constraining model parameters within and between groups, a family of 12 parsimonious DLM models is exhibited which allows to fit onto various situations. An estimation algorithm, calle…
Grouping observations into homogeneous groups is a recurrent task in statistical data analysis. We consider Gaussian Mixture Models, which are the most famous parametric model-based clustering method. We propose a new robust approach for model-based clustering, which consists in a modification of the EM algorithm (more specifically, the M-step) by replacing the estimates of the mean and the variance by robust versions based on the median and the median covariation matrix. All the proposed methods are available in the R package RGMM accessible on CRAN.
We present in this paper a novel non-parametric approach useful for clustering Markov processes. We introduce a pre-processing step consisting in mapping multivariate independent and identically distributed samples from random variables to a generic non-parametric representation which factorizes dependency and marginal distribution apart without losing any. An associated metric is defined where the balance between random variables dependency and distribution information is controlled by a single parameter. This mixing parameter can be learned or played with by a practitioner, such use is illus…
Aix Marseille Université（艾克斯-马赛大学）；Université de Toulon（土伦大学）
This paper introduces a novel mixture model-based approach for simultaneous clustering and optimal segmentation of functional data which are curves presenting regime changes. The proposed model consists in a finite mixture of piecewise polynomial regression models. Each piecewise polynomial regression model is associated with a cluster, and within each cluster, each piecewise polynomial component is associated with a regime (i.e., a segment). We derive two approaches for learning the model parameters. The former is an estimation approach and consists in maximizing the observed-data likelihood …
Normandie Univ（诺曼底大学）；UNICAEN（卡昂大学）；CNRS（法国国家科学研究中心）；Aix Marseille Université（艾克斯-马赛大学）；ENSAM（法国国立高等工程技术学校）；Université de Toulon（土伦大学）
The parsimonious Gaussian mixture models, which exploit an eigenvalue decomposition of the group covariance matrices of the Gaussian mixture, have shown their success in particular in cluster analysis. Their estimation is in general performed by maximum likelihood estimation and has also been considered from a parametric Bayesian prospective. We propose new Dirichlet Process Parsimonious mixtures (DPPM) which represent a Bayesian nonparametric formulation of these parsimonious Gaussian mixture models. The proposed DPPM models are Bayesian nonparametric parsimonious mixture models that allow to…
Chia and Nakano (2009) introduced the concept of M-decomposability of probability densities in one-dimension. In this paper, we generalize M-decomposability to any dimension. We prove that all elliptical unimodal densities are M-undecomposable. We also derive an inequality to show that it is better to represent an M-decomposable density via a mixture of unimodal densities. Finally, we demonstrate the application of M-decomposability to clustering and kernel density estimation, using real and simulated data. Our results show that M-decomposability can be used as a non-parametric criterion to lo…
Clustering partitions a dataset such that observations placed together in a group are similar but different from those in other groups. Hierarchical and $K$-means clustering are two approaches but have different strengths and weaknesses. For instance, hierarchical clustering identifies groups in a tree-like structure but suffers from computational complexity in large datasets while $K$-means clustering is efficient but designed to identify homogeneous spherically-shaped clusters. We present a hybrid non-parametric clustering approach that amalgamates the two methods to identify general-shaped …
