Tree based ensembles such as Breiman's random forest (RF) and Gradient Boosted Trees (GBT) can be interpreted as implicit kernel generators, where the ensuing proximity matrix represents the data-driven tree ensemble kernel. Kernel perspective on the RF has been used to develop a principled framework for theoretical investigation of its statistical properties. Recently, it has been shown that the kernel interpretation is germane to other tree-based ensembles e.g. GBTs. However, practical utility of the links between kernels and the tree ensembles has not been widely explored and systematically evaluated.
Focus of our work is investigation of the interplay between kernel methods and the tree based ensembles including the RF and GBT. We elucidate the performance and properties of the RF and GBT based kernels in a comprehensive simulation study comprising of continuous and binary targets. We show that for continuous targets, the RF/GBT kernels are competitive to their respective ensembles in higher dimensional scenarios, particularly in cases with larger number of noisy features. For the binary target, the RF/GBT kernels and their respective ensembles exhibit comparable performance. We provide the results from real life data sets for regression and classification to show how these insights may be leveraged in practice. Overall, our results support the tree ensemble based kernels as a valuable addition to the practitioner's toolbox.
Finally, we discuss extensions of the tree ensemble based kernels for survival targets, interpretable prototype and landmarking classification and regression. We outline future line of research for kernels furnished by Bayesian counterparts of the frequentist tree ensembles.
Kernels ensuing from tree ensembles such as random forest (RF) or gradient boosted trees (GBT), when used for kernel learning, have been shown to be competitive to their respective tree ensembles (particularly in higher dimensional scenarios). On the other hand, it has been also shown that performance of the kernel algorithms depends on the degree of the kernel-target alignment. However, the kernel-target alignment for kernel learning based on the tree ensembles has not been investigated and filling this gap is the main goal of our work. Using the eigenanalysis of the kernel matrix, we demonst…
In recent years, there have been significant efforts on mitigating unethical demographic biases in machine learning methods. However, very little is done for kernel methods. In this paper, we propose a new fair kernel regression method via fair feature embedding (FKR-F$^2$E) in kernel space. Motivated by prior works on feature selection in kernel space and feature processing for fair machine learning, we propose to learn fair feature embedding functions that minimize demographic discrepancy of feature distributions in kernel space. Compared to the state-of-the-art fair kernel regression method…
Kernel methods have had great success in Statistics and Machine Learning. Despite their growing popularity, however, less effort has been drawn towards developing kernel based classification methods on Riemannian manifolds due to difficulty in dealing with non-Euclidean geometry. In this paper, motivated by the extrinsic framework of manifold-valued data analysis, we propose a new positive definite kernel on planar Kendall shape space $Σ_2^k$, called extrinsic Veronese Whitney Gaussian kernel. We show that our approach can be extended to develop Gaussian kernels on any embedded manifold. Furth…
Needlets have been recognized as state-of-the-art tools to tackle spherical data, due to their excellent localization properties in both spacial and frequency domains. This paper considers developing kernel methods associated with the needlet kernel for nonparametric regression problems whose predictor variables are defined on a sphere. Due to the localization property in the frequency domain, we prove that the regularization parameter of the kernel ridge regression associated with the needlet kernel can decrease arbitrarily fast. A natural consequence is that the regularization term for the k…
By using the framework of Determinantal Point Processes (DPPs), some theoretical results concerning the interplay between diversity and regularization can be obtained. In this paper we show that sampling subsets with kDPPs results in implicit regularization in the context of ridgeless Kernel Regression. Furthermore, we leverage the common setup of state-of-the-art DPP algorithms to sample multiple small subsets and use them in an ensemble of ridgeless regressions. Our first empirical results indicate that ensemble of ridgeless regressors can be interesting to use for datasets including redunda…
Many machine learning problems can be formulated as predicting labels for a pair of objects. Problems of that kind are often referred to as pairwise learning, dyadic prediction or network inference problems. During the last decade kernel methods have played a dominant role in pairwise learning. They still obtain a state-of-the-art predictive performance, but a theoretical analysis of their behavior has been underexplored in the machine learning literature. In this work we review and unify existing kernel-based algorithms that are commonly used in different pairwise learning settings, ranging f…
We study the Stochastic Gradient Descent (SGD) algorithm in nonparametric statistics: kernel regression in particular. The directional bias property of SGD, which is known in the linear regression setting, is generalized to the kernel regression. More specifically, we prove that SGD with moderate and annealing step-size converges along the direction of the eigenvector that corresponds to the largest eigenvalue of the Gram matrix. In addition, the Gradient Descent (GD) with a moderate or small step-size converges along the direction that corresponds to the smallest eigenvalue. These facts are r…
Shanghai Jiao Tong University（上海交通大学）；Nanjing University of Science and Technology（南京理工大学）；KU Leuven（鲁汶大学）
In kernel methods, the kernels are often required to be positive definite, which restricts the use of many indefinite kernels. To consider those non-positive definite kernels, in this paper, we aim to build an indefinite kernel learning framework for kernel logistic regression. The proposed indefinite kernel logistic regression (IKLR) model is analysed in the Reproducing Kernel Kre\uın Spaces (RKKS) and then becomes non-convex. Using the positive decomposition of a non-positive definite kernel, the derived IKLR model can be decomposed into the difference of two convex functions. Accordingly, a…
Universitat Politècnica de Catalunya-Barcelona Tech（加泰罗尼亚理工大学-巴塞罗那理工大学）；University of Minnesota（明尼苏达大学）
Matrix completion and extrapolation (MCEX) are dealt with here over reproducing kernel Hilbert spaces (RKHSs) in order to account for prior information present in the available data. Aiming at a faster and low-complexity solver, the task is formulated as a kernel ridge regression. The resultant MCEX algorithm can also afford online implementation, while the class of kernel functions also encompasses several existing approaches to MC with prior information. Numerical tests on synthetic and real datasets show that the novel approach performs faster than widespread methods such as alternating lea…
Breiman's random forest (RF) can be interpreted as an implicit kernel generator,where the ensuing proximity matrix represents the data-driven RF kernel. Kernel perspective on the RF has been used to develop a principled framework for theoretical investigation of its statistical properties. However, practical utility of the links between kernels and the RF has not been widely explored and systematically evaluated.Focus of our work is investigation of the interplay between kernel methods and the RF. We elucidate the performance and properties of the data driven RF kernels used by regularized lin…
In this paper, we consider the coefficient-based regularized distribution regression which aims to regress from probability measures to real-valued responses over a reproducing kernel Hilbert space (RKHS), where the regularization is put on the coefficients and kernels are assumed to be indefinite. The algorithm involves two stages of sampling, the first stage sample consists of distributions and the second stage sample is obtained from these distributions. Asymptotic behaviors of the algorithm in different regularity ranges of the regression function are comprehensively studied and learning r…
In this paper, we consider the nonparametric least square regression in a Reproducing Kernel Hilbert Space (RKHS). We propose a new randomized algorithm that has optimal generalization error bounds with respect to the square loss, closing a long-standing gap between upper and lower bounds. Moreover, we show that our algorithm has faster finite-time and asymptotic rates on problems where the Bayes risk with respect to the square loss is small. We state our results using standard tools from the theory of least square regression in RKHSs, namely, the decay of the eigenvalues of the associated int…
Kernel method-based one-class classifier is mainly used for outlier or novelty detection. In this letter, kernel ridge regression (KRR) based one-class classifier (KOC) has been extended for learning using privileged information (LUPI). LUPI-based KOC method is referred to as KOC+. This privileged information is available as a feature with the dataset but only for training (not for testing). KOC+ utilizes the privileged information differently compared to normal feature information by using a so-called correction function. Privileged information helps KOC+ in achieving better generalization pe…
Federal University of Bahia（巴伊亚联邦大学）；Federal Institute of Pernambuco（伯南布哥联邦学院）；University of São Paulo（圣保罗大学）
Machine learning techniques always aim to reduce the generalized prediction error. In order to reduce it, ensemble methods present a good approach combining several models that results in a greater forecasting capacity. The Random Machines already have been demonstrated as strong technique, i.e: high predictive power, to classification tasks, in this article we propose an procedure to use the bagged-weighted support vector model to regression problems. Simulation studies were realized over artificial datasets, and over real data benchmarks. The results exhibited a good performance of Regressio…
Very few K-nearest-neighbor (KNN) ensembles exist, despite the efficacy of this approach in regression, classification, and outlier detection. Those that do exist focus on bagging features, rather than varying k or bagging observations; it is unknown whether varying k or bagging observations can improve prediction. Given recent studies from topological data analysis, varying k may function like multiscale topological methods, providing stability and better prediction, as well as increased ensemble diversity. This paper explores 7 KNN ensemble algorithms combining bagged features, bagged observ…
Image Processing Lab (IPL), Universitat de Val\`encia, Val\`encia, Spain
This paper introduces a novel statistical regression framework that allows the incorporation of consistency constraints. A linear and nonlinear (kernel-based) formulation are introduced, and both imply closed-form analytical solutions. The models exploit all the information from a set of drivers while being maximally independent of a set of auxiliary, protected variables. We successfully illustrate the performance in the estimation of chlorophyll content.
University of Jinan（济南大学）；Middle Tennessee State University（中田纳西州立大学）
Distributed machine learning systems have been receiving increasing attentions for their efficiency to process large scale data. Many distributed frameworks have been proposed for different machine learning tasks. In this paper, we study the distributed kernel regression via the divide and conquer approach. This approach has been proved asymptotically minimax optimal if the kernel is perfectly selected so that the true regression function lies in the associated reproducing kernel Hilbert space. However, this is usually, if not always, impractical because kernels that can only be selected via p…
Google Research（谷歌研究院）；University of Cambridge（剑桥大学）
Neural kernels have drastically increased performance on diverse and nonstandard data modalities but require significantly more compute, which previously limited their application to smaller datasets. In this work, we address this by massively parallelizing their computation across many GPUs. We combine this with a distributed, preconditioned conjugate gradients algorithm to enable kernel regression at a large scale (i.e. up to five million examples). Using this approach, we study scaling laws of several neural kernels across many orders of magnitude for the CIFAR-5m dataset. Using data augmen…
Kernel ridge regression (KRR) is a standard method for performing non-parametric regression over reproducing kernel Hilbert spaces. Given $n$ samples, the time and space complexity of computing the KRR estimate scale as $\mathcal{O}(n^3)$ and $\mathcal{O}(n^2)$ respectively, and so is prohibitive in many cases. We propose approximations of KRR based on $m$-dimensional randomized sketches of the kernel matrix, and study how small the projection dimension $m$ can be chosen while still preserving minimax optimality of the approximate KRR estimate. For various classes of randomized sketches, inclu…
We prove statistical rates of convergence for kernel-based least squares regression from i.i.d. data using a conjugate gradient algorithm, where regularization against overfitting is obtained by early stopping. This method is related to Kernel Partial Least Squares, a regression method that combines supervised dimensionality reduction with least squares projection. Following the setting introduced in earlier related literature, we study so-called "fast convergence rates" depending on the regularity of the target regression function (measured by a source condition in terms of the kernel integra…
Learning with Fredholm kernel has attracted increasing attention recently since it can effectively utilize the data information to improve the prediction performance. Despite rapid progress on theoretical and experimental evaluations, its generalization analysis has not been explored in learning theory literature. In this paper, we establish the generalization bound of least square regularized regression with Fredholm kernel, which implies that the fast learning rate O(l^{-1}) can be reached under mild capacity conditions. Simulated examples show that this Fredholm regression algorithm can ach…
Since their emergence in the 1990's, the support vector machine and the AdaBoost algorithm have spawned a wave of research in statistical machine learning. Much of this new research falls into one of two broad categories: kernel methods and ensemble methods. In this expository article, I discuss the main ideas behind these two types of methods, namely how to transform linear algorithms into nonlinear ones by using kernel functions, and how to make predictions with an ensemble or a collection of models rather than a single model. I also share my personal perspectives on how these ideas have inf…
Associating genetic markers with a multidimensional phenotype is an important yet challenging problem. In this work, we establish the equivalence between two popular methods: kernel-machine regression (KMR), and kernel distance covariance (KDC). KMR is a semiparametric regression frameworks that models the covariate effects parametrically, while the genetic markers are considered non-parametrically. KDC represents a class of methods that includes distance covariance (DC) and Hilbert-Schmidt Independence Criterion (HSIC), which are nonparametric tests of independence. We show the equivalence be…
In this paper, we introduce a new distribution regression model for probability distributions. This model is based on a Reproducing Kernel Hilbert Space (RKHS) regression framework, where universal kernels are built using Wasserstein distances for distributions belonging to W 2 ($Ω$) and $Ω$ is a compact subspace of R. We prove the universal kernel property of such kernels and use this setting to perform regressions on functions. Different regression models are first compared with the proposed one on simulated functional data. We then apply our regression model to transient evoked otoascoutic …
We prove rates of convergence in the statistical sense for kernel-based least squares regression using a conjugate gradient algorithm, where regularization against overfitting is obtained by early stopping. This method is directly related to Kernel Partial Least Squares, a regression method that combines supervised dimensionality reduction with least squares projection. The rates depend on two key quantities: first, on the regularity of the target regression function and second, on the intrinsic dimensionality of the data mapped into the kernel space. Lower bounds on attainable rates depending…
This is a note on logistic regression models and logistic kernel machine models. It contains derivations to some of the expressions in a paper -- SNP Set Analysis for Detecting Disease Association Using Exon Sequence Data -- submitted to BMC proceedings by these authors.
In this work, we develop and study an empirical projection operator scheme for solving nonparametric regression problems. This scheme is based on an approximate projection of the regression function over a suitable reproducing kernel Hilbert space (RKHS). The RKHS considered in this paper are generated by the Mercer kernels given by the Legendre Christoffel-Darboux and convolution Sinc kernels. We provide error and convergence analysis of the proposed scheme under the assumption that the regression function belongs to some suitable functional spaces. We also consider the popular RKHS regulariz…
We address the problem of filling missing entries in a kernel Gram matrix, given a related full Gram matrix. We attack this problem from the viewpoint of regression, assuming that the two kernel matrices can be considered as explanatory variables and response variables, respectively. We propose a variant of the regression model based on the underlying features in the reproducing kernel Hilbert space by modifying the idea of kernel canonical correlation analysis, and we estimate the missing entries by fitting this model to the existing samples. We obtain promising experimental results on gene n…
In this article, we consider convergence rates in functional linear regression with functional responses, where the linear coefficient lies in a reproducing kernel Hilbert space (RKHS). Without assuming that the reproducing kernel and the covariate covariance kernel are aligned, or assuming polynomial rate of decay of the eigenvalues of the covariance kernel, convergence rates in prediction risk are established. The corresponding lower bound in rates is derived by reducing to the scalar response case. Simulation studies and two benchmark datasets are used to illustrate that the proposed approa…
Kernel ridge regression is an important nonparametric method for estimating smooth functions. We introduce a new set of conditions, under which the actual rates of convergence of the kernel ridge regression estimator under both the L_2 norm and the norm of the reproducing kernel Hilbert space exceed the standard minimax rates. An application of this theory leads to a new understanding of the Kennedy-O'Hagan approach for calibrating model parameters of computer simulation. We prove that, under certain conditions, the Kennedy-O'Hagan calibration estimator with a known covariance function converg…
Expectile, first introduced by Newey and Powell (1987) in the econometrics literature, has recently become increasingly popular in risk management and capital allocation for financial institutions due to its desirable properties such as coherence and elicitability. The current standard tool for expectile regression analysis is the multiple linear expectile regression proposed by Newey and Powell in 1987. The growing applications of expectile regression motivate us to develop a much more flexible nonparametric multiple expectile regression in a reproducing kernel Hilbert space. The resulting es…
The goal of nonparametric regression is to recover an underlying regression function from noisy observations, under the assumption that the regression function belongs to a pre-specified infinite dimensional function space. In the online setting, when the observations come in a stream, it is generally computationally infeasible to refit the whole model repeatedly. There are as of yet no methods that are both computationally efficient and statistically rate-optimal. In this paper, we propose an estimator for online nonparametric regression. Notably, our estimator is an empirical risk minimizer …
We study the stability properties of nonlinear multi-task regression in reproducing Hilbert spaces with operator-valued kernels. Such kernels, a.k.a. multi-task kernels, are appropriate for learning prob- lems with nonscalar outputs like multi-task learning and structured out- put prediction. We show that multi-task kernel regression algorithms are uniformly stable in the general case of infinite-dimensional output spaces. We then derive under mild assumption on the kernel generaliza- tion bounds of such algorithms, and we show their consistency even with non Hilbert-Schmidt operator-valued ke…
We develop a multi-kernel based regression method for graph signal processing where the target signal is assumed to be smooth over a graph. In multi-kernel regression, an effective kernel function is expressed as a linear combination of many basis kernel functions. We estimate the linear weights to learn the effective kernel function by appropriate regularization based on graph smoothness. We show that the resulting optimization problem is shown to be convex and pro- pose an accelerated projected gradient descent based solution. Simulation results using real-world graph signals show efficiency…
The primary hyperparameter in kernel regression (KR) is the choice of kernel. In most theoretical studies of KR, one assumes the kernel is fixed before seeing the training data. Under this assumption, it is known that the optimal kernel is equal to the prior covariance of the target function. In this note, we consider KR in which the kernel may be updated after seeing the training data. We point out that an analogous choice of kernel using the posterior of the target function is optimal in this setting. Connections to the view of deep neural networks as data-dependent kernel learners are discu…
We propose Bayesian extensions of two nonparametric regression methods which are kernel and mutual $k$-nearest neighbor regression methods. Derived based on Gaussian process models for regression, the extensions provide distributions for target value estimates and the framework to select the hyperparameters. It is shown that both the proposed methods asymptotically converge to kernel and mutual $k$-nearest neighbor regression methods, respectively. The simulation results show that the proposed methods can select proper hyperparameters and are better than or comparable to the former methods for…
Recent research in the theory of overparametrized learning has sought to establish generalization guarantees in the interpolating regime. Such results have been established for a few common classes of methods, but so far not for ensemble methods. We devise an ensemble classification method that simultaneously interpolates the training data, and is consistent for a broad class of data distributions. To this end, we define the manifold-Hilbert kernel for data distributed on a Riemannian manifold. We prove that kernel smoothing regression using the manifold-Hilbert kernel is weakly consistent in …
Kernel regression is a popular non-parametric fitting technique. It aims at learning a function which estimates the targets for test inputs as precise as possible. Generally, the function value for a test input is estimated by a weighted average of the surrounding training examples. The weights are typically computed by a distance-based kernel function and they strongly depend on the distances between examples. In this paper, we first review the latest developments of sparse metric learning and kernel regression. Then a novel kernel regression method involving sparse metric learning, which is …
Google Research（谷歌研究院）；Courant Institute（科朗研究所）；UC Berkeley（加州大学伯克利分校）
This paper examines the problem of learning with a finite and possibly large set of p base kernels. It presents a theoretical and empirical analysis of an approach addressing this problem based on ensembles of kernel predictors. This includes novel theoretical guarantees based on the Rademacher complexity of the corresponding hypothesis sets, the introduction and analysis of a learning algorithm based on these hypothesis sets, and a series of experiments using ensembles of kernel predictors with several data sets. Both convex combinations of kernel-based hypotheses and more general Lq-regulari…
In this work, we demonstrate the advantage of the pGMM (``powered generalized min-max'') kernel in the context of (ridge) regression. In recent prior studies, the pGMM kernel has been extensively evaluated for classification tasks, for logistic regression, support vector machines, as well as deep neural networks. In this paper, we provide an experimental study on ridge regression, to compare the pGMM kernel regression with the ordinary ridge linear regression as well as the RBF kernel ridge regression. Perhaps surprisingly, even without a tuning parameter (i.e., $p=1$ for the power parameter o…
The objective of this study is to investigate the efficient determination of $C$ and $γ$ for Support Vector Regression with RBF or mahalanobis kernel based on numerical and statistician considerations, which indicates the connection between $C$ and kernels and demonstrates that the deviation of geometric distance of neighbour observation in mapped space effects the predict accuracy of $ε$-SVR. We determinate the arrange of $γ$ & $C$ and propose our method to choose their best values.
Rochester Institute of Technology（罗切斯特理工学院）；School of Mathematical Sciences（数学科学学院）
In this paper, the flexibility, versatility and predictive power of kernel regression are combined with now lavishly available network data to create regression models with even greater predictive performances. Building from previous work featuring generalized linear models built in the presence of network cohesion data, we construct a kernelized extension that captures subtler nonlinearities in extremely high dimensional spaces and also produces far better predictive performances. Applications of seamless yet substantial adaptation to simulated and real-life data demonstrate the appeal and st…
Swiss Finance Institute（瑞士金融研究所）；Yale University（耶鲁大学）；University of Lausanne（洛桑大学）；AQR Capital Management（AQR资本管理公司）；EPFL（洛桑联邦理工学院）
We introduce a methodology for designing and training deep neural networks (DNN) that we call "Deep Regression Ensembles" (DRE). It bridges the gap between DNN and two-layer neural networks trained with random feature regression. Each layer of DRE has two components, randomly drawn input weights and output weights trained myopically (as if the final output layer) using linear ridge regression. Within a layer, each neuron uses a different subset of inputs and a different ridge penalty, constituting an ensemble of random feature ridge regressions. Our experiments show that a single DRE architect…
School of Statistics and Data Science, Qufu Normal University（统计与数据科学学院，曲阜师范大学）；Dongfang College, ShanDong University of Finance and Economics（东方学院，山东财经大学）
Kernel logistic regression (KLR) is a powerful classification method widely applied across diverse domains. In many real-world scenarios, indefinite kernels capture more domain-specific structural information than positive definite kernels. This paper proposes a novel $L_1$-norm regularized indefinite kernel logistic regression (RIKLR) model, which extends the existing IKLR framework by introducing sparsity via an $L_1$-norm penalty. The introduction of this regularization enhances interpretability and generalization while introducing nonsmoothness and nonconvexity into the optimization landsc…
Zhejiang University（浙江大学）；Fudan University（复旦大学）；Middle Tennessee State University（中田纳西州立大学）
Distributed learning is an effective way to analyze big data. In distributed regression, a typical approach is to divide the big data into multiple blocks, apply a base regression algorithm on each of them, and then simply average the output functions learnt from these blocks. Since the average process will decrease the variance, not the bias, bias correction is expected to improve the learning performance if the base regression algorithm is a biased one. Regularization kernel network is an effective and widely used method for nonlinear regression analysis. In this paper we will investigate a …
King Abdullah University of Science and Technology（阿卜杜拉国王科技大学）
This paper carries out a large dimensional analysis of a variation of kernel ridge regression that we call \emph{centered kernel ridge regression} (CKRR), also known in the literature as kernel ridge regression with offset. This modified technique is obtained by accounting for the bias in the regression problem resulting in the old kernel ridge regression but with \emph{centered} kernels. The analysis is carried out under the assumption that the data is drawn from a Gaussian distribution and heavily relies on tools from random matrix theory (RMT). Under the regime in which the data dimension a…
Conditional expectiles are becoming an increasingly important tool in finance as well as in other areas of applications. We analyse a support vector machine type approach for estimating conditional expectiles and establish learning rates that are minimax optimal modulo a logarithmic factor if Gaussian RBF kernels are used and the desired expectile is smooth in a Besov sense. As a special case, our learning rates improve the best known rates for kernel-based least squares regression in this scenario. Key ingredients of our statistical analysis are a general calibration inequality for the asymme…
In this paper, we provide a Banach-space formulation of supervised learning with generalized total-variation (gTV) regularization. We identify the class of kernel functions that are admissible in this framework. Then, we propose a variation of supervised learning in a continuous-domain hybrid search space with gTV regularization. We show that the solution admits a multi-kernel expansion with adaptive positions. In this representation, the number of active kernels is upper-bounded by the number of data points while the gTV regularization imposes an $\ell_1$ penalty on the kernel coefficients. F…
We explore the link between deep ensembles and Gaussian processes (GPs) through the lens of the Neural Tangent Kernel (NTK): a recent development in understanding the training dynamics of wide neural networks (NNs). Previous work has shown that even in the infinite width limit, when NNs become GPs, there is no GP posterior interpretation to a deep ensemble trained with squared error loss. We introduce a simple modification to standard deep ensembles training, through addition of a computationally-tractable, randomised and untrainable function to each ensemble member, that enables a posterior i…
In presence of sparse noise we propose kernel regression for predicting output vectors which are smooth over a given graph. Sparse noise models the training outputs being corrupted either with missing samples or large perturbations. The presence of sparse noise is handled using appropriate use of $\ell_1$-norm along-with use of $\ell_2$-norm in a convex cost function. For optimization of the cost function, we propose an iteratively reweighted least-squares (IRLS) approach that is suitable for kernel substitution or kernel trick due to availability of a closed form solution. Simulations using r…
