Score-based algorithms for tuberculosis (TB) verbal screening perform poorly, causing misclassification that leads to missed cases and unnecessary costly laboratory tests for false positives. We compared score-based classification defined by clinicians to machine learning classification such as SVM-RBF, logistic regression, and XGBoost. We restricted our analyses to data from adults, the population most affected by TB, and investigated the difference between untuned and unweighted classifiers to the cost-sensitive ones. Predictions were compared with the corresponding GeneXpert MTB/Rif results. After adjusting the weight of the positive class to 40 for XGBoost, we achieved 96.64% sensitivity and 35.06% specificity. As such, the sensitivity of our identifier increased by 1.26% while specificity increased by 13.19% in absolute value compared to the traditional score-based method defined by our clinicians. Our approach further demonstrated that only 2000 data points were sufficient to enable the model to converge. The results indicate that even with limited data we can actually devise a better method to identify TB suspects from verbal screening.
Why ML-based cough models do not generalize: a systematic cross-dataset evaluation for tuberculosis screening
École Polytechnique Fédérale de Lausanne(洛桑联邦理工学院);Basque Center for Applied Mathematics (BCAM)(巴斯克应用数学中心);University of the Basque Country (EHU)(巴斯克大学)
Can artificial intelligence (AI) be used to accurately detect tuberculosis (TB) from chest X-rays? An evaluation of five AI products for TB screening and triaging in a high TB burden setting
Stop TB Partnership(遏制结核病伙伴关系);International Centre for Diarrhoeal Disease Research, Bangladesh (icddr,b)(孟加拉国国际腹泻病研究中心)
TB-Net: A Tailored, Self-Attention Deep Convolutional Neural Network Design for Detection of Tuberculosis Cases from Chest X-ray Images
University of Waterloo(滑铁卢大学);Waterloo Artificial Intelligence Institute(滑铁卢人工智能研究所);DarwinAI Corp.(DarwinAI公司);Niagara Health(尼亚加拉健康中心);McMaster University(麦克马斯特大学);Thunder Bay Regional Health Sciences Centre(桑德贝地区健康科学中心);Northern Ontario School of Medicine(北安大略医学院)
Wrong Organ, Right Physics: Transferring Echocardiography Pretraining to Lung Ultrasound for Tuberculosis Screening
University of Stellenbosch(斯泰伦博斯大学);Swiss Federal Institute of Technology (EPFL)(瑞士联邦理工学院(EPFL));National Teaching Hospital for Tuberculosis and Pulmonary Diseases (CNHU-PPC)(国家结核病与肺病教学医院(CNHU-PPC));South African Medical Research Council(南非医学研究理事会);Stellenbosch University(斯泰伦博斯大学)
我们提出了一个基于深度学习的自动咳嗽分类器,可以区分结核病(TB)咳嗽与COVID-19咳嗽和健康咳嗽。结核病和COVID-19都是呼吸道疾病,具有传染性,咳嗽是主要症状,每年夺去数千人的生命。咳嗽音频记录是在室内和室外环境下收集的,并且还使用来自全球各地的受试者的智能手机上传,因此包含各种级别的噪音。该咳嗽数据包括来自47名TB患者、229名COVID-19患者和1498名健康患者的1.68小时的TB咳嗽、18.54分钟的COVID-19咳嗽和1.69小时的健康咳嗽,并用于训练和评估CNN、LSTM和Resnet 50。这三个深度架构也在2.14小时的喷嚏,2.91小时的语音和2.79小时的噪音上进行了预训练,以提高性能。通过使用SMOTE数据平衡技术和使用F1评分和AUC等性能指标来解决数据集中的类不平衡问题。我们的研究表明,对于两类(TB vs COVID-19)和三类(TB vs COVID-19 vs健康)咳嗽分类任务,预训练的Resnet 50分别实现了0.9259和0.8631的最高F1分数。深度迁移学习的应用提高了分类器的性能,并使它们更鲁棒,因为它们在交叉验证折叠上更好地泛化。其性能超过了世界卫生组织(WHO)制定的结核病分诊测试要求。产生最佳性能的特征包含更高阶的MFCC,这表明人耳无法感知TB和COVID-19咳嗽之间的差异。这种类型的咳嗽音频分类是非接触式的…
Cross-cohort TB classification using clinical data gathered in Uganda and South Africa
University of Stellenbosch(斯泰伦博斯大学);Stellenbosch University(斯泰伦博斯大学);University of Amsterdam(阿姆斯特丹大学);University of Göttingen(哥廷根大学);Makerere University(马凯雷雷大学)
How well do routinely collected demographic and clinical variables aid point-of-care lung ultrasound TB classification
University of Stellenbosch(斯泰伦博斯大学);Swiss Federal Institute of Technology (EPFL)(瑞士联邦理工学院(EPFL));National Teaching Hospital for Tuberculosis and Pulmonary Diseases (CNHU-PPC)(国家结核病与肺部疾病教学医院(CNHU-PPC));South African Medical Research Council(南非医学研究理事会);Stellenbosch University(斯泰伦博斯大学)