Clustering is an important topic in algorithms, and has a number of applications in machine learning, computer vision, statistics, and several other research disciplines. Traditional objectives of graph clustering are to find clusters with low conductance. Not only are these objectives just applicable for undirected graphs, they are also incapable to take the relationships between clusters into account, which could be crucial for many applications. To overcome these downsides, we study directed graphs (digraphs) whose clusters exhibit further "structural" information amongst each other. Based on the Hermitian matrix representation of digraphs, we present a nearly-linear time algorithm for digraph clustering, and further show that our proposed algorithm can be implemented in sublinear time under reasonable assumptions. The significance of our theoretical work is demonstrated by extensive experimental results on the UN Comtrade Dataset: the output clustering of our algorithm exhibits not only how the clusters (sets of countries) relate to each other with respect to their import and export records, but also how these clusters evolve over time, in accordance with known facts in international trade.
How do vertices exert influence in graph data? We develop a framework for edge clustering, a new method for exploratory data analysis that reveals how both vertices and edges collaboratively accomplish directed influence in graphs, especially for directed graphs. In contrast to the ubiquitous vertex clustering which groups vertices, edge clustering groups edges. Edges sharing a functional affinity are assigned to the same group and form an influence subgraph cluster. With a complexity comparable to that of vertex clustering, this framework presents three different methods for edge spectral clu…
Motivated by the concept of network motifs we construct certain clustering methods (functors) which are parametrized by a given collection of motifs (or representers).
Stanford University（斯坦福大学）；Ohio State University（俄亥俄州立大学）；Rice University（莱斯大学）
We provide a complete taxonomic characterization of robust hierarchical clustering methods for directed networks following an axiomatic approach. We begin by introducing three practical properties associated with the notion of robustness in hierarchical clustering: linear scale preservation, stability, and excisiveness. Linear scale preservation enforces imperviousness to change in units of measure whereas stability ensures that a bounded perturbation in the input network entails a bounded perturbation in the clustering output. Excisiveness refers to the local consistency of the clustering out…
Graduate School of Information Science and Technology（信息科学技术研究生院）；Hokkaido University（北海道大学）
This paper presents a concise tutorial on spectral clustering for broad spectrum graphs which include unipartite (undirected) graph, bipartite graph, and directed graph. We show how to transform bipartite graph and directed graph into corresponding unipartite graph, therefore allowing a unified treatment to all cases. In bipartite graph, we show that the relaxed solution to the $K$-way co-clustering can be found by computing the left and right eigenvectors of the data matrix. This gives a theoretical basis for $K$-way spectral co-clustering algorithms proposed in the literatures. We also show …
Georgia Institute of Technology（佐治亚理工学院）；Pacific Northwest National Laboratory（太平洋西北国家实验室）
Cut-based directed graph (digraph) clustering often focuses on finding dense within-cluster or sparse between-cluster connections, similar to cut-based undirected graph clustering methods. In contrast, for flow-based clusterings the edges between clusters tend to be oriented in one direction and have been found in migration data, food webs, and trade data. In this paper we introduce a spectral algorithm for finding flow-based clusterings. The proposed algorithm is based on recent work which uses complex-valued Hermitian matrices to represent digraphs. By establishing an algebraic relationship …
We study the task of clustering in directed networks. We show that using the eigenvalue/eigenvector decomposition of the adjacency matrix is simpler than all common methods which are based on a combination of data regularization and SVD truncation, and works well down to the very sparse regime where the edge density has constant order. Our analysis is based on a Master Theorem describing sharp asymptotics for isolated eigenvalues/eigenvectors of sparse, non-symmetric matrices with independent entries. We also describe the limiting distribution of the entries of these eigenvectors; in the task …
Directed networks are broadly used to represent asymmetric relationships among units. Co-clustering aims to cluster the senders and receivers of directed networks simultaneously. In particular, the well-known spectral clustering algorithm could be modified as the spectral co-clustering to co-cluster directed networks. However, large-scale networks pose great computational challenges to it. In this paper, we leverage sketching techniques and derive two randomized spectral co-clustering algorithms, one \emph{random-projection-based} and the other \emph{random-sampling-based}, to accelerate the c…
University of Oxford（牛津大学）；The Alan Turing Institute（艾伦·图灵研究所）；Fudan University（复旦大学）；University of Edinburgh（爱丁堡大学）；University of Cambridge（剑桥大学）
Graph clustering is a basic technique in machine learning, and has widespread applications in different domains. While spectral techniques have been successfully applied for clustering undirected graphs, the performance of spectral clustering algorithms for directed graphs (digraphs) is not in general satisfactory: these algorithms usually require symmetrising the matrix representing a digraph, and typical objective functions for undirected graph clustering do not capture cluster-structures in which the information given by the direction of the edges is crucial. To overcome these downsides, we…
University of Oxford（牛津大学）；Princeton University（普林斯顿大学）；The Alan Turing Institute（阿兰·图灵研究所）；University of Glasgow（格拉斯哥大学）
Clustering is an essential technique for network analysis, with applications in a diverse range of fields. Although spectral clustering is a popular and effective method, it fails to consider higher-order structure and can perform poorly on directed networks. One approach is to capture and cluster higher-order structures using motif adjacency matrices. However, current formulations fail to take edge weights into account, and thus are somewhat limited when weight is a key component of the network under study. We address these shortcomings by exploring motif-based weighted spectral clustering me…
Max Planck Institute for Biological Cybernetics（马克斯·普朗克生物控制论研究所）
In recent years, spectral clustering has become one of the most popular modern clustering algorithms. It is simple to implement, can be solved efficiently by standard linear algebra software, and very often outperforms traditional clustering algorithms such as the k-means algorithm. On the first glance spectral clustering appears slightly mysterious, and it is not obvious to see why it works at all and what it really does. The goal of this tutorial is to give some intuition on those questions. We describe different graph Laplacians and their basic properties, present the most common spectral c…
University of Oxford（牛津大学）；The Alan Turing Institute（艾伦·图灵研究所）
Node clustering is a powerful tool in the analysis of networks. We introduce a graph neural network framework, named DIGRAC, to obtain node embeddings for directed networks in a self-supervised manner, including a novel probabilistic imbalance loss, which can be used for network clustering. Here, we propose \textit{directed flow imbalance} measures, which are tightly related to directionality, to reveal clusters in the network even when there is no density difference between clusters. In contrast to standard approaches in the literature, in this paper, directionality is not treated as a nuisan…
University of Chinese Academy of Sciences（中国科学院大学）
Spectral clustering and cloud computing is emerging branch of computer science or related discipline. It overcome the shortcomings of some traditional clustering algorithm and guarantee the convergence to the optimal solution, thus have to the widespread attention. This article first introduced the parallel spectral clustering algorithm research background and significance, and then to Hadoop the cloud computing Framework has carried on the detailed introduction, then has carried on the related to spectral clustering is introduced, then introduces the spectral clustering arithmetic Method of p…
University of Sheffield（谢菲尔德大学）；National Institute of Informatics（国立信息学研究所）
Spectral clustering is one of the most popular clustering methods for finding clusters in a graph, which has found many applications in data mining. However, the input graph in those applications may have many missing edges due to error in measurement, withholding for a privacy reason, or arbitrariness in data conversion. To make reliable and efficient decisions based on spectral clustering, we assess the stability of spectral clustering against edge perturbations in the input graph using the notion of average sensitivity, which is the expected size of the symmetric difference of the output cl…
This work studies the classical spectral clustering algorithm which embeds the vertices of some graph $G=(V_G, E_G)$ into $\mathbb{R}^k$ using $k$ eigenvectors of some matrix of $G$, and applies $k$-means to partition $V_G$ into $k$ clusters. Our first result is a tighter analysis on the performance of spectral clustering, and explains why it works under some much weaker condition than the ones studied in the literature. For the second result, we show that, by applying fewer than $k$ eigenvectors to construct the embedding, spectral clustering is able to produce better output for many practica…
Graph convolutional networks(GCNs) have become the most popular approaches for graph data in these days because of their powerful ability to extract features from graph. GCNs approaches are divided into two categories, spectral-based and spatial-based. As the earliest convolutional networks for graph data, spectral-based GCNs have achieved impressive results in many graph related analytics tasks. However, spectral-based models cannot directly work on directed graphs. In this paper, we propose an improved spectral-based GCN for the directed graph by leveraging redefined Laplacians to improve it…
University of North Carolina at Charlotte（北卡罗来纳大学夏洛特分校）；University of Arkansas（阿肯色大学）
It has been shown that the adjacency eigenspace of a network contains key information of its underlying structure. However, there has been no study on spectral analysis of the adjacency matrices of directed signed graphs. In this paper, we derive theoretical approximations of spectral projections from such directed signed networks using matrix perturbation theory. We use the derived theoretical results to study the influences of negative intra cluster and inter cluster directed edges on node spectral projections. We then develop a spectral clustering based graph partition algorithm, SC-DSG, an…
We propose and study a novel graph clustering method for data with an intrinsic network structure. Similar to spectral clustering, we exploit an intrinsic network structure of data to construct Euclidean feature vectors. These feature vectors can then be fed into basic clustering methods such as k-means or Gaussian mixture model (GMM) based soft clustering. What sets our approach apart from spectral clustering is that we do not use the eigenvectors of a graph Laplacian to construct the feature vectors. Instead, we use the solutions of total variation minimization problems to construct feature …
Clustering in graphs has been a well-known research problem, particularly because most Internet and social network data is in the form of graphs. Organizations widely use spectral clustering algorithms to find clustering in graph datasets. However, applying spectral clustering to a large dataset is challenging due to computational overhead. While the distributed spectral clustering algorithm exists, they face the problem of data privacy and increased communication costs between the clients. Thus, in this paper, we propose a spectral clustering algorithm using federated learning (FL) to overcom…
Given the widespread popularity of spectral clustering (SC) for partitioning graph data, we study a version of constrained SC in which we try to incorporate the fairness notion proposed by Chierichetti et al. (2017). According to this notion, a clustering is fair if every demographic group is approximately proportionally represented in each cluster. To this end, we develop variants of both normalized and unnormalized constrained SC and show that they help find fairer clusterings on both synthetic and real data. We also provide a rigorous theoretical analysis of our algorithms on a natural vari…
Spectral Clustering (SC) is widely used for clustering data on a nonlinear manifold. SC aims to cluster data by considering the preservation of the local neighborhood structure on the manifold data. This paper extends Spectral Clustering to Local and Global Structure Preservation Based Spectral Clustering (LGPSC) that incorporates both global structure and local neighborhood structure simultaneously. For this extension, LGPSC proposes two models to extend local structures preservation to local and global structures preservation: Spectral clustering guided Principal component analysis model and…
Spectral clustering is a novel clustering method which can detect complex shapes of data clusters. However, it requires the eigen decomposition of the graph Laplacian matrix, which is proportion to $O(n^3)$ and thus is not suitable for large scale systems. Recently, many methods have been proposed to accelerate the computational time of spectral clustering. These approximate methods usually involve sampling techniques by which a lot information of the original data may be lost. In this work, we propose a fast and accurate spectral clustering approach using an approximate commute time embedding…
A Comprehensive Survey on Spectral Clustering with Graph Structure Learning
Queensland University of Technology (QUT)（昆士兰科技大学）；Graduate University of Advanced Technology（高等技术研究生院）；Ardakan University（阿尔达坎大学）；RMIT University（皇家墨尔本理工大学）
University of Southern California, Los Angeles, CA 90089, USA
Spectral clustering is one of the most popular clustering methods. However, the high computational cost due to the involved eigen-decomposition procedure can immediately hinder its applications in large-scale tasks. In this paper we use spectrum-preserving node reduction to accelerate eigen-decomposition and generate concise representations of data sets. Specifically, we create a small number of pseudonodes based on spectral similarity. Then, standard spectral clustering algorithm is performed on the smaller node set. Finally, each data point in the original data set is assigned to the cluster…
Dual-Center Graph Clustering with Neighbor Distribution
Shandong University（山东大学）；Aerospace Information Research Institute, Chinese Academy of Sciences（中国科学院 aerospace information research institute）；Harbin Institute of Technology (Shenzhen)（哈尔滨工业大学（深圳））
Spectral clustering is one of the most popular clustering methods. However, how to balance the efficiency and effectiveness of the large-scale spectral clustering with limited computing resources has not been properly solved for a long time. In this paper, we propose a divide-and-conquer based large-scale spectral clustering method to strike a good balance between efficiency and effectiveness. In the proposed method, a divide-and-conquer based landmark selection algorithm and a novel approximate similarity matrix approach are designed to construct a sparse similarity matrix within low computat…
Comparison of three kind of the clustering and find cost function and loss function and calculate them. Error rate of the clustering methods and how to calculate the error percentage always be one on the important factor for evaluating the clustering methods, so this paper introduce one way to calculate the error rate of clustering methods. Clustering algorithms can be divided into several categories including partitioning clustering algorithms, hierarchical algorithms and density based algorithms. Generally speaking we should compare clustering algorithms by Scalability, Ability to work with …
TU Dortmund University（多特蒙德工业大学）；Technische Universiteit Eindhoven（埃因霍温理工大学）
When it comes to clustering nonconvex shapes, two paradigms are used to find the most suitable clustering: minimum cut and maximum density. The most popular algorithms incorporating these paradigms are Spectral Clustering and DBSCAN. Both paradigms have their pros and cons. While minimum cut clusterings are sensitive to noise, density-based clusterings have trouble handling clusters with varying densities. In this paper, we propose \textsc{SpectACl}: a method combining the advantages of both approaches, while solving the two mentioned drawbacks. Our method is easy to implement, such as spectra…
University of Technology Sydney（悉尼科技大学）；Monash University（莫纳什大学）
Graph clustering is a fundamental task which discovers communities or groups in networks. Recent studies have mostly focused on developing deep learning approaches to learn a compact graph embedding, upon which classic clustering methods like k-means or spectral clustering algorithms are applied. These two-step frameworks are difficult to manipulate and usually lead to suboptimal performance, mainly because the graph embedding is not goal-directed, i.e., designed for the specific clustering task. In this paper, we propose a goal-directed deep learning approach, Deep Attentional Embedded Graph …
Spectral clustering is a key research topic in the field of machine learning and data mining. Most of the existing spectral clustering algorithms are built upon Gaussian Laplacian matrices, which are sensitive to parameters. We propose a novel parameter free, distance consistent Locally Linear Embedding. The proposed distance consistent LLE promises that edges between closer data points have greater weight.Furthermore, we propose a novel improved spectral clustering via embedded label propagation. Our algorithm is built upon two advancements of the state of the art:1) label propagation,which p…
University of Chinese Academy of Sciences（中国科学院大学）；Northeastern University（东北大学）；Shenyang Institute of Automation, Chinese Academy of Sciences（中国科学院沈阳自动化研究所）；MIT（麻省理工学院）
In the past decades, spectral clustering (SC) has become one of the most effective clustering algorithms. However, most previous studies focus on spectral clustering tasks with a fixed task set, which cannot incorporate with a new spectral clustering task without accessing to previously learned tasks. In this paper, we aim to explore the problem of spectral clustering in a lifelong machine learning framework, i.e., Lifelong Spectral Clustering (L2SC). Its goal is to efficiently learn a model for a new spectral clustering task by selectively transferring previously accumulated experience from k…
We derive Cheeger inequalities for directed graphs and hypergraphs using the reweighted eigenvalue approach that was recently developed for vertex expansion in undirected graphs [OZ22,KLT22,JPV22]. The goal is to develop a new spectral theory for directed graphs and an alternative spectral theory for hypergraphs. The first main result is a Cheeger inequality relating the vertex expansion $\vecψ(G)$ of a directed graph $G$ to the vertex-capacitated maximum reweighted second eigenvalue $\vecλ_2^{v*}$: \[ \vecλ_2^{v*} \lesssim \vecψ(G) \lesssim \sqrt{\vecλ_2^{v*} \cdot \log (Δ/\vecλ_2^{v*})}. \] …
Spectral Clustering is a popular technique to split data points into groups, especially for complex datasets. The algorithms in the Spectral Clustering family typically consist of multiple separate stages (such as similarity matrix construction, low-dimensional embedding, and K-Means clustering as post processing), which may lead to sub-optimal results because of the possible mismatch between different stages. In this paper, we propose an end-to-end single-stage learning method to clustering called Regularized Non-negative Spectral Embedding (RNSE) which extends Spectral Clustering with the ad…
This paper uses the relationship between graph conductance and spectral clustering to study (i) the failures of spectral clustering and (ii) the benefits of regularization. The explanation is simple. Sparse and stochastic graphs create a lot of small trees that are connected to the core of the graph by only one edge. Graph conductance is sensitive to these noisy `dangling sets'. Spectral clustering inherits this sensitivity. The second part of the paper starts from a previously proposed form of regularized spectral clustering and shows that it is related to the graph conductance on a `regulari…
University of Technology Sydney（悉尼科技大学）；Northwestern Polytechnical University（西北工业大学）；University of Texas at Arlington（德克萨斯大学阿灵顿分校）；Carnegie Mellon University（卡内基梅隆大学）；The University of Queensland（昆士兰大学）
Spectral clustering is a fundamental technique in the field of data mining and information processing. Most existing spectral clustering algorithms integrate dimensionality reduction into the clustering process assisted by manifold learning in the original space. However, the manifold in reduced-dimensional subspace is likely to exhibit altered properties in contrast with the original space. Thus, applying manifold information obtained from the original space to the clustering process in a low-dimensional subspace is prone to inferior performance. Aiming to address this issue, we propose a nov…
Spectral clustering and Singular Value Decomposition (SVD) are both widely used technique for analyzing graph data. In this note, I will present their connections using simple linear algebra, aiming to provide some in-depth understanding for future research.
Johns Hopkins University（约翰斯·霍普金斯大学）；Institute for Defense Analyses（国防分析研究所）；University of Massachusetts（马萨诸塞大学）
Clustering is concerned with coherently grouping observations without any explicit concept of true groupings. Spectral graph clustering - clustering the vertices of a graph based on their spectral embedding - is commonly approached via K-means (or, more generally, Gaussian mixture model) clustering composed with either Laplacian or Adjacency spectral embedding (LSE or ASE). Recent theoretical results provide new understanding of the problem and solutions, and lead us to a 'Two Truths' LSE vs. ASE spectral graph clustering phenomenon convincingly illustrated here via a diffusion MRI connectome …
The cost of computing the spectrum of Laplacian matrices hinders the application of spectral clustering to large data sets. While approximations recover computational tractability, they can potentially affect clustering performance. This paper proposes a practical approach to learn spectral clustering based on adaptive stochastic gradient optimization. Crucially, the proposed approach recovers the exact spectrum of Laplacian matrices in the limit of the iterations, and the cost of each iteration is linear in the number of samples. Extensive experimental validation on data sets with up to half …
We utilize the PageRank vector to generalize the $k$-means clustering algorithm to directed and undirected graphs. We demonstrate that PageRank and other centrality measures can be used in our setting to robustly compute centrality of nodes in a given graph. Furthermore, we show how our method can be generalized to metric spaces and apply it to other domains such as point clouds and triangulated meshes
Clustering Result Re-guided Incomplete Multi-view Spectral Clustering
College of Information Engineering, Shanghai Maritime University（上海 Maritime University 信息工程学院）；Department of Automation, Shanghai Jiao Tong University（上海 Jiao Tong University 自动化系）
Spectral clustering is a popular algorithm that clusters points using the eigenvalues and eigenvectors of Laplacian matrices derived from the data. For years, spectral clustering has been working mysteriously. This paper explains spectral clustering by dividing it into two categories based on whether the graph Laplacian is fully connected or not. For a fully connected graph, this paper demonstrates the dimension reduction part by offering an objective function: the covariance between the original data points' similarities and the mapped data points' similarities. For a multi-connected graph, t…
Spectral algorithms are graph partitioning algorithms that partition a node set of a graph into groups by using a spectral embedding map. Clustering techniques based on the algorithms are referred to as spectral clustering and are widely used in data analysis. To gain a better understanding of why spectral clustering is successful, Peng et al. (2015) and Kolev and Mehlhorn (2016) studied the behavior of a certain type of spectral algorithm for a class of graphs, called well-clustered graphs. Specifically, they put an assumption on graphs and showed the performance guarantee of the spectral alg…
China University of Mining and Technology（中国矿业大学）；Nankai University（南开大学）
Spectral clustering methods are widely used for detecting clusters in networks for community detection, while a small change on the graph Laplacian matrix could bring a dramatic improvement. In this paper, we propose a dual regularized graph Laplacian matrix and then employ it to three classical spectral clustering approaches under the degree-corrected stochastic block model. If the number of communities is known as $K$, we consider more than $K$ leading eigenvectors and weight them by their corresponding eigenvalues in the spectral clustering procedure to improve the performance. Three improv…
In this study, we propose a new spectral clustering framework that can auto-tune the parameters of the clustering algorithm in the context of speaker diarization. The proposed framework uses normalized maximum eigengap (NME) values to estimate the number of clusters and the parameters for the threshold of the elements of each row in an affinity matrix during spectral clustering, without the use of parameter tuning on the development set. Even through this hands-off approach, we achieve a comparable or better performance across various evaluation sets than the results found using traditional cl…
Max Planck Institute for Computer Science（马克斯·普朗克计算机科学研究所）；Saarland University（萨尔大学）
An important form of prior information in clustering comes in form of cannot-link and must-link constraints. We present a generalization of the popular spectral clustering technique which integrates such constraints. Motivated by the recently proposed $1$-spectral clustering for the unconstrained problem, our method is based on a tight relaxation of the constrained normalized cut into a continuous optimization problem. Opposite to all other methods which have been suggested for constrained spectral clustering, we can always guarantee to satisfy all constraints. Moreover, our soft formulation a…
China University of Mining and Technology（中国矿业大学）；Nankai University（南开大学）
For community detection problem, spectral clustering is a widely used method for detecting clusters in networks. In this paper, we propose an improved spectral clustering (ISC) approach under the degree corrected stochastic block model (DCSBM). ISC is designed based on the k-means clustering algorithm on the weighted leading K + 1 eigenvectors of a regularized Laplacian matrix where the weights are their corresponding eigenvalues. Theoretical analysis of ISC shows that under mild conditions the ISC yields stable consistent community detection. Numerical results show that ISC outperforms classi…
