arXivDaily arXiv每日学术速递 周一至周五更新
arXiv 2011.02893q-bio.QMcs.LG

RetroXpert: Decompose Retrosynthesis Prediction like a Chemist

University of Texas at Arlington(德克萨斯大学阿灵顿分校);Tsinghua University(清华大学);Tencent AI Lab(腾讯人工智能实验室);Sun Yat-sen University(中山大学)

Chaochao Yan, Qianggang Ding, Peilin Zhao, Shuangjia Zheng, Jinyu Yang, Yang Yu, Junzhou Huang

英文摘要:

Retrosynthesis is the process of recursively decomposing target molecules into available building blocks. It plays an important role in solving problems in organic synthesis planning. To automate or assist in the retrosynthesis analysis, various retrosynthesis prediction algorithms have been proposed. However, most of them are cumbersome and lack interpretability about their predictions. In this paper, we devise a novel template-free algorithm for automatic retrosynthetic expansion inspired by how chemists approach retrosynthesis prediction. Our method disassembles retrosynthesis into two steps: i) identify the potential reaction center of the target molecule through a novel graph neural network and generate intermediate synthons, and ii) generate the reactants associated with synthons via a robust reactant generation model. While outperforming the state-of-the-art baselines by a significant margin, our model also provides chemically reasonable interpretation.

机构、总结、中文摘要均由AI分析而来,可能存在错误,请以论文正文为准。

↑