Integrating uncertainty in deep neural networks for MRI based stroke analysis
University of Zurich (UZH)（苏黎世大学）；Zurich University of Applied Sciences (ZHAW)（苏黎世应用科技大学）；Konstanz University of Applied Sciences（康斯坦茨应用科技大学）；University Hospital Zurich (UHZ)（苏黎世大学医院）
Lisa Herzog, Elvis Murina, Oliver Dürr, Susanne Wegener, Beate Sick
At present, the majority of the proposed Deep Learning (DL) methods provide point predictions without quantifying the models uncertainty. However, a quantification of the reliability of automated image analysis is essential, in particular in medicine when physicians rely on the results for making critical treatment decisions. In this work, we provide an entire framework to diagnose ischemic stroke patients incorporating Bayesian uncertainty into the analysis procedure. We present a Bayesian Convolutional Neural Network (CNN) yielding a probability for a stroke lesion on 2D Magnetic Resonance (MR) images with corresponding uncertainty information about the reliability of the prediction. For patient-level diagnoses, different aggregation methods are proposed and evaluated, which combine the single image-level predictions. Those methods take advantage of the uncertainty in image predictions and report model uncertainty at the patient-level. In a cohort of 511 patients, our Bayesian CNN achieved an accuracy of 95.33% at the image-level representing a significant improvement of 2% over a non-Bayesian counterpart. The best patient aggregation method yielded 95.89% of accuracy. Integrating uncertainty information about image predictions in aggregation models resulted in higher uncertainty measures to false patient classifications, which enabled to filter critical patient diagnoses that are supposed to be closer examined by a medical doctor. We therefore recommend using Bayesian approaches not only for improved image-level prediction and uncertainty estimation but also for the detection of uncertain aggregations at the patient-level.
CREATIS（CREATIS实验室）；Université Lyon 1（里昂第一大学）；INSA-Lyon（里昂国立应用科学学院）；Hospices Civils de Lyon（里昂民用医院）；CarMeN（CarMeN实验室）；LARIS（LARIS实验室）；Universite d’Angers（昂热大学）
Patient outcome prediction is critical in management of ischemic stroke. In this paper, a novel machine learning model is proposed for stroke outcome prediction using multimodal Magnetic Resonance Imaging (MRI). The proposed model consists of two serial levels of Autoencoders (AEs), where different AEs at level 1 are used for learning unimodal features from different MRI modalities and a AE at level 2 is used to combine the unimodal features into compressed multimodal features. The sequences of multimodal features of a given patient are then used by an LSTM network for predicting outcome score…
Stroke Locus Net: Occluded Vessel Localization from MRI Modalities
Department of Electrical Engineering, College of Engineering, Qatar University, Doha, Qatar（电气工程系，工程学院，卡塔尔大学，多哈，卡塔尔）；Department of Mathematics and Statistics, College of Arts and Sciences, Qatar University, Doha, Qatar（数学与统计学系，艺术与科学学院，卡塔尔大学，多哈，卡塔尔）
本研究提出端到端深度学习流水线 Stroke Locus Net，结合 nnUNet 分割、动脉图谱与 pGAN 生成，仅用 MRI 扫描实现闭塞血管定位，为更快速的中风诊断提供潜力。
USC Stevens Neuroimaging and Informatics Institute（南加州大学史蒂文斯神经影像与信息学研究所）；Zilkha Neurogenetic Institute, Keck School of Medicine of USC（南加州大学凯克医学院齐尔卡神经遗传学研究所）；Martinos Center for Biomedical Imaging, Massachusetts General Hospital（麻省总医院马蒂诺斯生物医学成像中心）；Yale University（耶鲁大学）；University of Iowa（爱荷华大学）；Augusta University（奥古斯塔大学）；University of Texas（德克萨斯大学）；Kennedy Krieger Institute, Johns Hopkins University（约翰斯·霍普金斯大学肯尼迪·克里格研究所）
While ischemic stroke is a leading cause of death worldwide, there has been little success translating putative cerebroprotectants from rodent preclinical trials to human patients. We investigated computational image-based assessment tools for practical improvement of the quality, scalability, and outlook for large scale preclinical screening for potential therapeutic interventions in rodent models. We developed, evaluated, and deployed a pipeline for image-based stroke outcome quantification for the Stroke Preclinical Assessment Network (SPAN), a multi-site, multi-arm, multi-stage study evalu…
Acute stroke lesion segmentation tasks are of great clinical interest as they can help doctors make better informed treatment decisions. Magnetic resonance imaging (MRI) is time demanding but can provide images that are considered gold standard for diagnosis. Automated stroke lesion segmentation can provide with an estimate of the location and volume of the lesioned tissue, which can help in the clinical practice to better assess and evaluate the risks of each treatment. We propose a deep learning methodology for acute and sub-acute stroke lesion segmentation using multimodal MR imaging. The p…
GlaxoSmithKline（葛兰素史克）；University College London（伦敦大学学院）；Imperial College London（帝国理工学院）
One third of stroke survivors have language difficulties. Emerging evidence suggests that their likelihood of recovery depends mainly on the damage to language centers. Thus previous research for predicting language recovery post-stroke has focused on identifying damaged regions of the brain. In this paper, we introduce a novel method where we only make use of stitched 2-dimensional cross-sections of raw MRI scans in a deep convolutional neural network setup to predict language recovery post-stroke. Our results show: a) the proposed model that only uses MRI scans has comparable performance to …
Comparing Baseline and Day-1 Diffusion MRI Using Multimodal Deep Embeddings for Stroke Outcome Prediction
1 Department of Computer Science, University of Geneva, Switzerland 2 Department of Electrical \& Computer Engineering, University of Florida, FL, USA 3 Service of Medical Informatics, University Hospital of Geneva, Switzerland 4 Department of Imaging；Medical Informatics, University of Geneva, Switzerland
CREATIS（CREATIS实验室）；Université Lyon1（里昂第一大学）；CNRS（法国国家科学研究中心）；INSERM（法国国家健康与医学研究院）；INSA-Lyon（里昂国立应用科学学院）；Hospices Civils de Lyon（里昂民用医院）；CarMeN（CarMeN实验室）；INRA（法国国家农业研究院）；LARIS（LARIS实验室）；Universite d’Angers（昂热大学）
Clinical outcome prediction plays an important role in stroke patient management. From a machine learning point-of-view, one of the main challenges is dealing with heterogeneous data at patient admission, i.e. the image data which are multidimensional and the clinical data which are scalars. In this paper, a multimodal convolutional neural network - long short-term memory (CNN-LSTM) based ensemble model is proposed. For each MR image module, a dedicated network provides preliminary prediction of the clinical outcome using the modified Rankin scale (mRS). The final mRS score is obtained by merg…
Local Gamma Augmentation for Ischemic Stroke Lesion Segmentation on MRI
University of Copenhagen（哥本哈根大学）；Cerebriu A/S（Cerebriu公司）；Rigshospitalet, Copenhagen, Denmark（哥本哈根大学医院）；Pioneer Centre for Artificial Intelligence, University of Copenhagen（哥本哈根大学人工智能先锋中心）
Diffusion-Weighted Magnetic Resonance Imaging (DWI) is widely used for early cerebral infarct detection caused by ischemic stroke. Manual segmentation is done by a radiologist as a common clinical process, nonetheless, challenges of cerebral infarct segmentation come from low resolution and uncertain boundaries. Many segmentation techniques have been proposed and proved by manual segmentation as gold standard. In order to reduce human error in research operation and clinical process, we adopt a semi-automatic segmentation as gold standard using Fluid-Attenuated Inversion-Recovery (FLAIR) Magne…
Dual-Encoder Transformer-Based Multimodal Learning for Ischemic Stroke Lesion Segmentation Using Diffusion MRI
Department of Anesthesiology, Perioperative and Pain Medicine, Stanford University（麻醉学、围术期与疼痛医学系，斯坦福大学）；Department of Biomedical Sciences, Seoul National University（生物医学科学系，首尔国立大学）；Department of Computer Engineering, National University of Sciences and Technology (NUST)（计算机工程系，国立科学与技术大学（NUST））；Department of Computer Science, The University of Alabama（计算机科学系，阿拉巴马大学）；Department of Computer Science, Hanyang University（计算机科学系，翰阳大学）
Fusion of Diffusion Weighted MRI and Clinical Data for Predicting Functional Outcome after Acute Ischemic Stroke with Deep Contrastive Learning
Queens College of the City University of NY（纽约市立大学皇后学院）；National Chung Cheng University（台湾中正大学）；Ditmanson Medical Foundation Chia-Yi Christian Hospital（戴德森医疗财团法人嘉义基督教医院）
The rapid increment of morbidity of brain stroke in the last few years have been a driving force towards fast and accurate segmentation of stroke lesions from brain MRI images. With the recent development of deep-learning, computer-aided and segmentation methods of ischemic stroke lesions have been useful for clinicians in early diagnosis and treatment planning. However, most of these methods suffer from inaccurate and unreliable segmentation results because of their inability to capture sufficient contextual features from the MRI volumes. To meet these requirements, 3D convolutional neural ne…
New Jersey Institute of Technology（新泽西理工学院）；Kessler Foundation（凯斯勒基金会）；Rutgers – New Jersey Medical School（罗格斯大学新泽西医学院）；Medical College of Wisconsin（威斯康星医学院）；Rutgers University – Newark（罗格斯大学纽瓦克分校）
Automatic identification of brain lesions from magnetic resonance imaging (MRI) scans of stroke survivors would be a useful aid in patient diagnosis and treatment planning. We propose a multi-modal multi-path convolutional neural network system for automating stroke lesion segmentation. Our system has nine end-to-end UNets that take as input 2-dimensional (2D) slices and examines all three planes with three different normalizations. Outputs from these nine total paths are concatenated into a 3D volume that is then passed to a 3D convolutional neural network to output a final lesion mask. We tr…
Comparative evaluation of training strategies using partially labelled datasets for segmentation of white matter hyperintensities and stroke lesions in FLAIR MRI
ISLES 2022: A multi-center magnetic resonance imaging stroke lesion segmentation dataset
Technical University of Munich（慕尼黑工业大学）；Klinikum rechts der Isar（右岸医院）；School of Medicine, Technical University of Munich（慕尼黑工业大学医学院）；icometrix（icometrix公司）；University Medical Center Hamburg-Eppendorf（汉堡埃彭多夫大学医学中心）；University of Bern（伯尔尼大学）；ARTORG Center for Biomedical Engineering Research, Univ. of Bern（伯尔尼大学生物医学工程研究ARTORG中心）；University of Southern California（南加州大学）；Chan Division of Occupational Science and Occupational Therapy, University of Southern California（南加州大学陈职业科学与职业治疗系）；TranslaTUM – Central Institute for Translational Cancer Research, Technical University of Munich（慕尼黑工业大学TranslaTUM转化癌症研究中心）
University of Minho（米尼奥大学）；University Hospital Inselspital and University of Bern（Inselspital大学医院与伯尔尼大学）；University of Bern（伯尔尼大学）
Stroke is the second most common cause of death in developed countries, where rapid clinical intervention can have a major impact on a patient's life. To perform the revascularization procedure, the decision making of physicians considers its risks and benefits based on multi-modal MRI and clinical experience. Therefore, automatic prediction of the ischemic stroke lesion outcome has the potential to assist the physician towards a better stroke assessment and information about tissue outcome. Typically, automatic methods consider the information of the standard kinetic models of diffusion and p…
University of California, Los Angeles（加州大学洛杉矶分校）；VA Phoenix Healthcare System（凤凰城退伍军人医疗系统）
Treatment of acute ischemic strokes (AIS) is largely contingent upon the time since stroke onset (TSS). However, TSS may not be readily available in up to 25% of patients with unwitnessed AIS. Current clinical guidelines for patients with unknown TSS recommend the use of MRI to determine eligibility for thrombolysis, but radiology assessments have high inter-reader variability. In this work, we present deep learning models that leverage MRI diffusion series to classify TSS based on clinically validated thresholds. We propose an intra-domain task-adaptive transfer learning method, which involve…
The Johns Hopkins University School of Medicine（约翰斯·霍普金斯大学医学院）；Sidney Kimmel Comprehensive Cancer Center（西德尼·金梅尔综合癌症中心）；The Johns Hopkins University（约翰斯·霍普金斯大学）
The evaluation and treatment of acute cerebral ischemia requires a technique that can determine the total area of tissue at risk for infarction using diagnostic magnetic resonance imaging (MRI) sequences. Typical MRI data sets consist of T1- and T2-weighted imaging (T1WI, T2WI) along with advanced MRI parameters of diffusion-weighted imaging (DWI) and perfusion weighted imaging (PWI) methods. Each of these parameters has distinct radiological-pathological meaning. For example, DWI interrogates the movement of water in the tissue and PWI gives an estimate of the blood flow, both are critical me…
Feasibility Study of a Diffusion-Based Model for Cross-Modal Generation of Knee MRI from X-ray: Integrating Radiographic Feature Information
Massachusetts General Hospital（麻省总医院）；Harvard Medical School（哈佛医学院）；University Sorbonne Paris Nord（巴黎北大索邦大学）；German Cancer Research Center（德国癌症研究中心）；Jiangsu Institute of Hematology（江苏血液学研究所）；The First Affiliated Hospital of Soochow University（苏州大学附属第一医院）；Henan University of Chinese Medicine（河南中医药大学）；Athinoula A. Martinos Centre for Biomedical Imaging（阿西努拉·A.马蒂诺斯生物医学成像中心）；IDP Institute（IDP研究所）；University of Orleans（奥尔良大学）
Kobe University Hospital（神户大学医院）；Research Center for Advanced Science and Technology, The University of Tokyo（东京大学先进科学技术研究中心）；Ichinomiyanishi Nishi Hospital（一宮西医院）；Osaka Red Cross Hospital（大阪红十字医院）
Background and Purpose: We aimed to develop and evaluate an automatic acute ischemic stroke-related (AIS) detection system involving a two-stage deep learning model. Methods: We included 238 cases from two different institutions. AIS-related findings were annotated on each of the 238 sets of head CT images by referring to head magnetic resonance imaging (MRI) images in which an MRI examination was performed within 24 h following the CT scan. These 238 annotated cases were divided into a training set including 189 cases and test set including 49 cases. Subsequently, a two-stage deep learning de…
Magnetic Resonance Imaging (MRI) has evolved as a clinical standard-of-care imaging modality for cardiac morphology, function assessment, and guidance of cardiac interventions. All these applications rely on accurate extraction of the myocardial tissue and blood pool from the imaging data. Here we propose a framework for left ventricle (LV) segmentation from cardiac cine-MRI. First, we segment the LV blood pool using iterative graph cuts, and subsequently use this information to segment the myocardium. We formulate the segmentation procedure as an energy minimization problem in a graph subject…
Stanford University（斯坦福大学）；GE Healthcare（通用电气医疗集团）；University of California Riverside（加州大学河滨分校）；National Taiwan University（台湾大学）
Accurate quantification of cerebral blood flow (CBF) is essential for the diagnosis and assessment of cerebrovascular diseases such as Moyamoya, carotid stenosis, aneurysms, and stroke. Positron emission tomography (PET) is currently regarded as the gold standard for the measurement of CBF in the human brain. PET imaging, however, is not widely available because of its prohibitive costs, use of ionizing radiation, and logistical challenges, which require a co-localized cyclotron to deliver the 2 min half-life Oxygen-15 radioisotope. Magnetic resonance imaging (MRI), in contrast, is more readil…
New Jersey Institute of Technology（新泽西理工学院）；Kessler Foundation（凯斯勒基金会）；Emory University（埃默里大学）；Atlanta VA Medical Center（亚特兰大退伍军人事务医疗中心）；Medical College of Wisconsin（威斯康星医学院）；Rutgers University - Newark（罗格斯大学纽瓦克分校）
We propose a fully 3D multi-path convolutional network to predict stroke lesions from 3D brain MRI images. Our multi-path model has independent encoders for different modalities containing residual convolutional blocks, weighted multi-path feature fusion from different modalities, and weighted fusion modules to combine encoder and decoder features. Compared to existing 3D CNNs like DeepMedic, 3D U-Net, and AnatomyNet, our networks achieves the highest statistically significant cross-validation accuracy of 60.5% on the large ATLAS benchmark of 220 patients. We also test our model on multi-modal…
Ischemic Stroke Lesion Segmentation challenge (ISLES 2022) offers a platform for researchers to compare their solutions to 3D segmentation of ischemic stroke regions from 3D MRIs. In this work, we describe our solution to ISLES 2022 segmentation task. We re-sample all images to a common resolution, use two input MRI modalities (DWI and ADC) and train SegResNet semantic segmentation network from MONAI. The final submission is an ensemble of 15 models (from 3 runs of 5-fold cross validation). Our solution (team name NVAUTO) achieves the top place in terms of Dice metric (0.824), and overall rank…
University of Bern（伯尔尼大学）；Department of Neurology, Inselspital, University of Bern（伯尔尼大学 Inselspital 神经科）；Department of Neurology, University of California Los Angeles (UCLA)（加州大学洛杉矶分校（UCLA）神经科）；Support Center for Advanced Neuroimaging, Institute for Diagnostic and Interventional Neuroradiology, Inselspital, University of Bern（伯尔尼大学 Inselspital 诊断与介入神经放射学研究所高级神经影像支持中心）
In this work, we present a novel convolutional neural net- work based method for perfusion map generation in dynamic suscepti- bility contrast-enhanced perfusion imaging. The proposed architecture is trained end-to-end and solely relies on raw perfusion data for inference. We used a dataset of 151 acute ischemic stroke cases for evaluation. Our method generates perfusion maps that are comparable to the target maps used for clinical routine, while being model-free, fast, and less noisy.
State-of-the-Art Stroke Lesion Segmentation at 1/1000th of Parameters
Center for Data Science, Nell Hodgson Woodruff School of Nursing（内尔·霍奇森·伍德拉夫护理学院数据科学中心）；Emory University（埃默里大学）；University of South Carolina（南卡罗来纳大学）；Georgia State University（佐治亚州立大学）
Universidad Técnica Particular de Loja（洛哈技术大学）；University of Waterloo（滑铁卢大学）；Universitat Politècnica de València（瓦伦西亚理工大学）；Consejo Superior de Investigaciones Científicas (CSIC)（西班牙国家研究委员会）
Medical brain image analysis is a necessary step in Computer Assisted /Aided Diagnosis (CAD) systems. Advancements in both hardware and software in the past few years have led to improved segmentation and classification of various diseases. In the present work, we review the published literature on systems and algorithms that allow for classification, identification, and detection of White Matter Hyperintensities (WMHs) of brain MRI images specifically in cases of ischemic stroke and demyelinating diseases. For the selection criteria, we used the bibliometric networks. Out of a total of 140 do…
Unified 3D MRI Representations via Sequence-Invariant Contrastive Learning
Department of Imaging Neuroscience, University College London, UK（影像神经科学系，伦敦大学学院，英国）；Institute of Cognitive Neuroscience, University College London, UK（认知神经科学研究所，伦敦大学学院，英国）
University of Edinburgh（爱丁堡大学）；University of Auckland（奥克兰大学）；Sunnybrook Research Institute（桑尼布鲁克研究所）；University of Toronto（多伦多大学）
Perivascular Spaces (PVS) are a recently recognised feature of Small Vessel Disease (SVD), also indicating neuroinflammation, and are an important part of the brain's circulation and glymphatic drainage system. Quantitative analysis of PVS on Magnetic Resonance Images (MRI) is important for understanding their relationship with neurological diseases. In this work, we propose a segmentation technique based on the 3D Frangi filtering for extraction of PVS from MRI. Based on prior knowledge from neuroradiological ratings of PVS, we used ordered logit models to optimise Frangi filter parameters in…
Accelerating Stroke MRI with Diffusion Probabilistic Models through Large-Scale Pre-training and Target-Specific Fine-Tuning
Chandra Family Department of Electrical and Computer Engineering（查克拉家族电气与计算机工程系）；Department of Imaging Physics（成像物理系）；Dell Medical School Department of Neurology（德莱尔医学院神经学系）；Dell Medical School Department of Neurosurgery（德莱尔医学院神经外科系）；Dell Medical School Department of Diagnostic Medicine（德莱尔医学院诊断医学系）；Oden Institute for Computational Engineering and Sciences（奥登计算工程与科学研究院）
University of California, Los Angeles（加利福尼亚大学洛杉矶分校）；Chung-Ang University（中央大学）
We present a method to segment MRI scans of the human brain into ischemic stroke lesion and normal tissues. We propose a neural network architecture in the form of a standard encoder-decoder where predictions are guided by a spatial expansion embedding network. Our embedding network learns features that can resolve detailed structures in the brain without the need for high-resolution training images, which are often unavailable and expensive to acquire. Alternatively, the encoder-decoder learns global structures by means of striding and max pooling. Our embedding network complements the encode…
Memorial Sloan Kettering Cancer Center（纪念斯隆·凯特琳癌症中心）
Lung tumors, especially those located close to or surrounded by soft tissues like the mediastinum, are difficult to segment due to the low soft tissue contrast on computed tomography images. Magnetic resonance images contain superior soft-tissue contrast information that can be leveraged if both modalities were available for training. Therefore, we developed a cross-modality educed learning approach where MR information that is educed from CT is used to hallucinate MRI and improve CT segmentation. Our approach, called cross-modality educed deep learning segmentation (CMEDL) combines CT and pse…
J. J. Strossmayer University of Osijek（奥西耶克J.J.斯特罗斯马耶大学）；Ghent University（根特大学）；imec（比利时微电子研究中心）
Atrial fibrillation (AF) is a cardiovascular disease identified as one of the main risk factors for stroke. The majority of strokes due to AF are caused by clots originating in the left atrial appendage (LAA). LAA occlusion is an effective procedure for reducing stroke risk. Planning the procedure using pre-procedural imaging and analysis has shown benefits. The analysis is commonly done by manually segmenting the appendage on 2D slices. Automatic LAA segmentation methods could save an expert's time and provide insightful 3D visualizations and accurate automatic measurements to aid in medical …
Deep Learning-Based Diffusion MRI Tractography: Integrating Spatial and Anatomical Information
School of Biomedical Engineering, Southern Medical University（南方医科大学生物医学工程学院）；School of Computer Science and Technology, Nanjing University of Science and Technology（南京理工大学计算机科学与技术学院）；Shunde Hospital, Southern Medical University（南方医科大学顺德医院）
BrainDINO: A Brain MRI Foundation Model for Generalizable Clinical Representation Learning
Department of Radiation Oncology and Winship Cancer Institute, Emory University（放射肿瘤科和Winship癌症研究所，埃默里大学）；Department of Radiation and Cellular Oncology, The University of Chicago（放射肿瘤学与细胞肿瘤学部，芝加哥大学）；Department of Electrical and Computer Engineering, Georgia Institute of Technology（电气与计算机工程系，佐治亚理工学院）；Department of Biomedical Engineering, Georgia Institute of Technology（生物医学工程系，佐治亚理工学院）；Department of Biomedical Informatics, Emory University（生物医学信息学系，埃默里大学）；Department of Medical Physics, Memorial Sloan Kettering Cancer Center（医学物理系，纪念斯隆凯特琳癌症中心）
Labeling subtypes in a Parkinson's Cohort using Multifeatures in MRI -- Integrating Grey and White Matter Information
Indian Institute of Technology Guwahati（印度理工学院古瓦哈提分校）；National Institute of Mental Health and Neurosciences（国家心理健康与神经科学研究所）；National Institute of Mental Health & Neuro Sciences（国家心理健康与神经科学研究所）；Jyoti and Bhupat Mehta School of Health Sciences and Technology, Indian Institute of Technology Guwahati（乔蒂与布帕特·梅塔健康科学与技术学院，印度理工学院古瓦哈提分校）
Henry Jackson Foundation（亨利·杰克逊基金会）；National Institute of Health（美国国立卫生研究院）
Traumatic brain injury (TBI) is caused by a sudden trauma to the head that may result in hematomas and contusions and can lead to stroke or chronic disability. An accurate quantification of the lesion volumes and their locations is essential to understand the pathophysiology of TBI and its progression. In this paper, we propose a fully convolutional neural network (CNN) model to segment contusions and lesions from brain magnetic resonance (MR) images of patients with TBI. The CNN architecture proposed here was based on a state of the art CNN architecture from Google, called Inception. Using a …
AI Virtanen Institute for Molecular Sciences, University of Eastern Finland（东芬兰大学AI·维尔塔宁分子科学研究所）；Charles River Discovery Services（查尔斯河发现服务公司）；Centro Fermi - Museo Storico della Fisica e Centro Studi e Ricerche Enrico Fermi（费米中心——恩里科·费米物理历史博物馆与研究中心）
Manual segmentation of rodent brain lesions from magnetic resonance images (MRIs) is an arduous, time-consuming and subjective task that is highly important in pre-clinical research. Several automatic methods have been developed for different human brain MRI segmentation, but little research has targeted automatic rodent lesion segmentation. The existing tools for performing automatic lesion segmentation in rodents are constrained by strict assumptions about the data. Deep learning has been successfully used for medical image segmentation. However, there has not been any deep learning approach…
Full-Head Segmentation of MRI with Abnormal Brain Anatomy: Model and Data Release
The City College of New York（纽约市立学院）；New York University（纽约大学）；Georgetown University（乔治城大学）；University of North Carolina School of Medicine（北卡罗来纳大学医学院）；Soterix Medical
Université de Sherbrooke（舍布鲁克大学）；Imagia cybernetics（Imagia cybernetics公司）；Google（谷歌）；Imeka Inc.（Imeka公司）
Segmentation of focal (localized) brain pathologies such as brain tumors and brain lesions caused by multiple sclerosis and ischemic strokes are necessary for medical diagnosis, surgical planning and disease development as well as other applications such as tractography. Over the years, attempts have been made to automate this process for both clinical and research reasons. In this regard, machine learning methods have long been a focus of attention. Over the past two years, the medical imaging field has seen a rise in the use of a particular branch of machine learning commonly known as deep l…
Domain-Agnostic Stroke Lesion Segmentation Using Physics-Constrained Synthetic Data
Department of Imaging Neuroscience, University College London（影像神经科学系，伦敦大学学院）；Institute of Cognitive Neuroscience, University College London（认知神经科学研究所，伦敦大学学院）
An Efficient Deep Learning Framework for Brain Stroke Diagnosis Using Computed Tomography Images
Department of Computer Science；Engineering, Bangladesh University, Mohammadpur, Dhaka - 1207, Bangladesh；School of Computing, Montclair State University, Montclair, NJ 07043, USA；Technology University, Tangail-1902, Dhaka, Bangladesh；School of Computing, Georgia Southern University, Statesboro, GA 30458, Georgia, USA；Engineering, National Institute of Textile Engineering；Research (NITER), \ Institute of Dhaka University, Savar, Dhaka-1350, Bangladesh；Faculty of Computer Science；Informatics, Berlin School of Business；Centre for Image；Vision Computing (CIVC), COE for Artificial Intelligence, Faculty of Artificial Intelligence；Engineering (FAIE), Multimedia University, Cyberjaya 63100, Malaysia；Engineering, The University of Aizu, Aizuwakamatsu, Fukushima, Japan
