A Survey on Concept Factorization: From Shallow to Deep Representation Learning
Hefei University of Technology（合肥工业大学）；Soochow University（苏州大学）；Zhengzhou University（郑州大学）；University of Technology Sydney（悉尼科技大学）；YITU Technology（依图科技）
Zhao Zhang, Yan Zhang, Mingliang Xu, Li Zhang, Yi Yang, Shuicheng Yan
备注：
Please cite this work as: Zhao Zhang, Yan Zhang, Mingliang Xu, Li Zhang, Yi Yang and Shuicheng Yan, "A Survey on Concept Factorization: From Shallow to Deep Representation Learning," Information Processing and Management (IPM), Jan 2021
The quality of learned features by representation learning determines the performance of learning algorithms and the related application tasks (such as high-dimensional data clustering). As a relatively new paradigm for representation learning, Concept Factorization (CF) has attracted a great deal of interests in the areas of machine learning and data mining for over a decade. Lots of effective CF based methods have been proposed based on different perspectives and properties, but note that it still remains not easy to grasp the essential connections and figure out the underlying explanatory factors from exiting studies. In this paper, we therefore survey the recent advances on CF methodologies and the potential benchmarks by categorizing and summarizing the current methods. Specifically, we first re-view the root CF method, and then explore the advancement of CF-based representation learning ranging from shallow to deep/multilayer cases. We also introduce the potential application areas of CF-based methods. Finally, we point out some future directions for studying the CF-based representation learning. Overall, this survey provides an insightful overview of both theoretical basis and current developments in the field of CF, which can also help the interested researchers to understand the current trends of CF and find the most appropriate CF techniques to deal with particular applications.
Amirkabir University of Technology (Tehran Polytechnic)（阿米尔卡比尔理工大学（德黑兰理工大学））
The overfitting is one of the cursing subjects in the deep learning field. To solve this challenge, many approaches were proposed to regularize the learning models. They add some hyper-parameters to the model to extend the generalization; however, it is a hard task to determine these hyper-parameters and a bad setting diverges the training process. In addition, most of the regularization schemes decrease the learning speed. Recently, Tai et al. [1] proposed low-rank tensor decomposition as a constrained filter for removing the redundancy in the convolution kernels of CNN. With a different view…
Department of Computer Science, Harbin Institute of Technology (Shenzhen)（哈尔滨工业大学（深圳）计算机科学与技术学院）；Department of Electronic Engineering, City University of Hong Kong（香港城市大学电子工程系）
In this paper, we investigate the unsupervised deep representation learning issue and technically propose a novel framework called Deep Self-representative Concept Factorization Network (DSCF-Net), for clustering deep features. To improve the representation and clustering abilities, DSCF-Net explicitly considers discovering hidden deep semantic features, enhancing the robustness proper-ties of the deep factorization to noise and preserving the local man-ifold structures of deep features. Specifically, DSCF-Net seamlessly integrates the robust deep concept factorization, deep self-expressive re…
Soochow University（苏州大学）；Hefei University of Technology（合肥工业大学）；Adobe Research（奥多比研究院）；Nanjing University of Information Science and Technology（南京信息工程大学）；National University of Singapore（新加坡国立大学）
We investigate the high-dimensional data clustering problem by proposing a novel and unsupervised representation learning model called Robust Flexible Auto-weighted Local-coordinate Concept Factorization (RFA-LCF). RFA-LCF integrates the robust flexible CF, robust sparse local-coordinate coding and the adaptive reconstruction weighting learning into a unified model. The adaptive weighting is driven by including the joint manifold preserving constraints on the recovered clean data, basis concepts and new representation. Specifically, our RFA-LCF uses a L2,1-norm based flexible residue to encode…
National Engineering School of Tunis, University of Tunis El Manar（突尼斯埃尔马纳尔大学突尼斯国立工程学院）；Aix Marseille University（艾克斯-马赛大学）；CNRS（法国国家科学研究中心）；Ecole Centrale de Marseille（马赛中央理工学院）
We study the implicit regularization effects of deep learning in tensor factorization. While implicit regularization in deep matrix and 'shallow' tensor factorization via linear and certain type of non-linear neural networks promotes low-rank solutions with at most quadratic growth, we show that its effect in deep tensor factorization grows polynomially with the depth of the network. This provides a remarkably faithful description of the observed experimental behaviour. Using numerical experiments, we demonstrate the benefits of this implicit regularization in yielding a more accurate estimati…
Tensor factorization arises in many machine learning applications, such knowledge base modeling and parameter estimation in latent variable models. However, numerical methods for tensor factorization have not reached the level of maturity of matrix factorization methods. In this paper, we propose a new method for CP tensor factorization that uses random projections to reduce the problem to simultaneous matrix diagonalization. Our method is conceptually simple and also applies to non-orthogonal and asymmetric tensors of arbitrary order. We prove that a small number random projections essentiall…
Nonnegative matrix factorization (NMF) with group sparsity constraints is formulated as a probabilistic graphical model and, assuming some observed data have been generated by the model, a feasible variational Bayesian algorithm is derived for learning model parameters. When used in a supervised learning scenario, NMF is most often utilized as an unsupervised feature extractor followed by classification in the obtained feature subspace. Having mapped the class labels to a more general concept of groups which underlie sparsity of the coefficients, what the proposed group sparse NMF model allows…
National Research University Higher School of Economics（国家研究型高等经济大学）；LORIA（洛林计算机科学及其应用实验室）；CNRS（法国国家科学研究中心）；Inria（法国国家信息与自动化研究所）；University of Lorraine（洛林大学）；Palacký University Olomouc（奥洛穆茨帕拉茨基大学）
During the past few years Boolean matrix factorization (BMF) has become an important direction in data analysis. The minimum description length principle (MDL) was successfully adapted in BMF for the model order selection. Nevertheless, a BMF algorithm performing good results from the standpoint of standard measures in BMF is missing. In this paper, we propose a novel from-below Boolean matrix factorization algorithm based on formal concept analysis. The algorithm utilizes the MDL principle as a criterion for the factor selection. On various experiments we show that the proposed algorithm outp…
Soochow University（苏州大学）；Hefei University of Technology（合肥工业大学）；Harbin Institute of Technology（哈尔滨工业大学）；Pengcheng Laboratory（鹏城实验室）；Sea AI Labs
Nonnegative matrix factorization is usually powerful for learning the "shallow" parts-based representation, but it clearly fails to discover deep hierarchical information within both the basis and representation spaces. In this paper, we technically propose a new enriched prior based Dual-constrained Deep Semi-Supervised Coupled Factorization Network, called DS2CF-Net, for learning the hierarchical coupled representations. To ex-tract hidden deep features, DS2CF-Net is modeled as a deep-structure and geometrical structure-constrained neural network. Specifically, DS2CF-Net designs a deep coupl…
We consider the problem of recovering low-rank matrices from random rank-one measurements, which spans numerous applications including covariance sketching, phase retrieval, quantum state tomography, and learning shallow polynomial neural networks, among others. Our approach is to directly estimate the low-rank factor by minimizing a nonconvex quadratic loss function via vanilla gradient descent, following a tailored spectral initialization. When the true rank is small, this algorithm is guaranteed to converge to the ground truth (up to global ambiguity) with near-optimal sample complexity and…
Ferdowsi University of Mashhad（马什哈德菲尔多西大学）；University of Tehran（德黑兰大学）
In this paper, we tackle two important problems in low-rank learning, which are partial singular value decomposition and numerical rank estimation of huge matrices. By using the concepts of Krylov subspaces such as Golub-Kahan bidiagonalization (GK-bidiagonalization) as well as Ritz vectors, we propose two methods for solving these problems in a fast and accurate way. Our experiments show the advantages of the proposed methods compared to the traditional and randomized singular value decomposition methods. The proposed methods are appropriate for applications involving huge matrices where the …
Emory University（埃默里大学）；UT Health Science Center at Houston（德克萨斯大学休斯顿健康科学中心）
Tensor factorization has been demonstrated as an efficient approach for computational phenotyping, where massive electronic health records (EHRs) are converted to concise and meaningful clinical concepts. While distributing the tensor factorization tasks to local sites can avoid direct data sharing, it still requires the exchange of intermediary results which could reveal sensitive patient information. Therefore, the challenge is how to jointly decompose the tensor under rigorous and principled privacy constraints, while still support the model's interpretability. We propose DPFact, a privacy-…
University of California（加利福尼亚大学）；University of Washington（华盛顿大学）
Matrix factorization is a well-studied task in machine learning for compactly representing large, noisy data. In our approach, instead of using the traditional concept of matrix rank, we define a new notion of link-rank based on a non-linear link function used within factorization. In particular, by applying the round function on a factorization to obtain ordinal-valued matrices, we introduce generalized round-rank (GRR). We show that not only are there many full-rank matrices that are low GRR, but further, that these matrices cannot be approximated well by low-rank linear factorization. We pr…
University of Texas, Austin（得克萨斯大学奥斯汀分校）；Vanderbilt University（范德堡大学）；Emory University（埃默里大学）
It has been recently shown that sparse, nonnegative tensor factorization of multi-modal electronic health record data is a promising approach to high-throughput computational phenotyping. However, such approaches typically do not leverage available domain knowledge while extracting the phenotypes; hence, some of the suggested phenotypes may not map well to clinical concepts or may be very similar to other suggested phenotypes. To address these issues, we present a novel, automatic approach called PIVETed-Granite that mines existing biomedical literature (PubMed) to obtain cannot-link constrain…
Convolutional neural network (CNN) models for computer vision are powerful but lack explainability in their most basic form. This deficiency remains a key challenge when applying CNNs in important domains. Recent work on explanations through feature importance of approximate linear models has moved from input-level features (pixels or segments) to features from mid-layer feature maps in the form of concept activation vectors (CAVs). CAVs contain concept-level information and could be learned via clustering. In this work, we rethink the ACE algorithm of Ghorbani et~al., proposing an alternative…
Constrained low-rank matrix approximations have been known for decades as powerful linear dimensionality reduction techniques to be able to extract the information contained in large data sets in a relevant way. However, such low-rank approaches are unable to mine complex, interleaved features that underlie hierarchical semantics. Recently, deep matrix factorization (deep MF) was introduced to deal with the extraction of several layers of features and has been shown to reach outstanding performances on unsupervised tasks. Deep MF was motivated by the success of deep learning, as it is conceptu…
A convergent algorithm for nonnegative matrix factorization with orthogonality constraints imposed on both factors is proposed in this paper. This factorization concept was first introduced by Ding et al. with intent to further improve clustering capability of NMF. However, as the original algorithm was developed based on multiplicative update rules, the convergence of the algorithm cannot be guaranteed. In this paper, we utilize the technique presented in our previous work to develop the algorithm and prove that it converges to a stationary point inside the solution space.
Supervised Deep Multimodal Matrix Factorization for Interpretable Brain Network Analysis
Dept. of Mathematics & Operational Research University of Mons（数学与运筹学系蒙斯大学）；Dept. of Computer Science & Engineering Lehigh University（计算机科学与工程系莱斯大学）；Dept. of Industrial & Systems Engineering Lehigh University（工业与系统工程系莱斯大学）
Traditional NMF-based signal decomposition relies on the factorization of spectral data, which is typically computed by means of short-time frequency transform. In this paper we propose to relax the choice of a pre-fixed transform and learn a short-time orthogonal transform together with the factorization. To this end, we formulate a regularized optimization problem reminiscent of conventional NMF, yet with the transform as additional unknown parameters, and design a novel block-descent algorithm enabling to find stationary points of this objective function. The proposed joint transform learni…
In this work, we propose a new method to integrate two recent lines of work: unsupervised induction of shallow semantics (e.g., semantic roles) and factorization of relations in text and knowledge bases. Our model consists of two components: (1) an encoding component: a semantic role labeling model which predicts roles given a rich set of syntactic and lexical features; (2) a reconstruction component: a tensor factorization model which relies on roles to predict argument fillers. When the components are estimated jointly to minimize errors in argument reconstruction, the induced roles largely …
Pohang University of Science and Technology（浦项科技大学）；Georgia Institute of Technology（佐治亚理工学院）；University of California, San Diego（加利福尼亚大学圣迭戈分校）
Tensor factorization models offer an effective approach to convert massive electronic health records into meaningful clinical concepts (phenotypes) for data analysis. These models need a large amount of diverse samples to avoid population bias. An open challenge is how to derive phenotypes jointly across multiple hospitals, in which direct patient-level data sharing is not possible (e.g., due to institutional policies). In this paper, we developed a novel solution to enable federated tensor factorization for computational phenotyping without sharing patient-level data. We developed secure data…
In recent years, a number of artificial intelligent services have been developed such as defect detection system or diagnosis system for customer services. Unfortunately, the core in these services is a black-box in which human cannot understand the underlying decision making logic, even though the inspection of the logic is crucial before launching a commercial service. Our goal in this paper is to propose an analytic method of a model explanation that is applicable to general classification models. To this end, we introduce the concept of a contribution matrix and an explanation embedding in…
University at Albany - SUNY（纽约州立大学奥尔巴尼分校）；University of Pittsburgh（匹兹堡大学）；Federal University of Rio de Janeiro（里约热内卢联邦大学）
Knowledge Tracing (KT), which aims to model student knowledge level and predict their performance, is one of the most important applications of user modeling. Modern KT approaches model and maintain an up-to-date state of student knowledge over a set of course concepts according to students' historical performance in attempting the problems. However, KT approaches were designed to model knowledge by observing relatively small problem-solving steps in Intelligent Tutoring Systems. While these approaches were applied successfully to model student knowledge by observing student solutions for simp…
This paper proposes new nonnegative (shallow and multi-layer) autoencoders by combining the spiking Random Neural Network (RNN) model, the network architecture typical used in deep-learning area and the training technique inspired from nonnegative matrix factorization (NMF). The shallow autoencoder is a simplified RNN model, which is then stacked into a multi-layer architecture. The learning algorithm is based on the weight update rules in NMF, subject to the nonnegative probability constraints of the RNN. The autoencoders equipped with this learning algorithm are tested on typical image datas…
We present a converged algorithm for Tikhonov regularized nonnegative matrix factorization (NMF). We specially choose this regularization because it is known that Tikhonov regularized least square (LS) is the more preferable form in solving linear inverse problems than the conventional LS. Because an NMF problem can be decomposed into LS subproblems, it can be expected that Tikhonov regularized NMF will be the more appropriate approach in solving NMF problems. The algorithm is derived using additive update rules which have been shown to have convergence guarantee. We equip the algorithm with a…
University of Maryland（马里兰大学）；Los Alamos National Laboratory（洛斯阿拉莫斯国家实验室）
We utilize a recently developed topic modeling method called SeNMFk, extending the standard Non-negative Matrix Factorization (NMF) methods by incorporating the semantic structure of the text, and adding a robust system for determining the number of topics. With SeNMFk, we were able to extract coherent topics validated by human experts. From these topics, a few are relatively general and cover broad concepts, while the majority can be precisely mapped to specific scientific effects or measurement techniques. The topics also differ by ubiquity, with only three topics prevalent in almost 40 perc…
Click-through rate (CTR) prediction models are common in many online applications such as digital advertising and recommender systems. Field-Aware Factorization Machine (FFM) and Field-weighted Factorization Machine (FwFM) are state-of-the-art among the shallow models for CTR prediction. Recently, many deep learning-based models have also been proposed. Among deeper models, DeepFM, xDeepFM, AutoInt+, and FiBiNet are state-of-the-art models. The deeper models combine a core architectural component, which learns explicit feature interactions, with a deep neural network (DNN) component. We propos…
Tensor factorization has been proved as an efficient unsupervised learning approach for health data analysis, especially for computational phenotyping, where the high-dimensional Electronic Health Records (EHRs) with patients' history of medical procedures, medications, diagnosis, lab tests, etc., are converted to meaningful and interpretable medical concepts. Federated tensor factorization distributes the tensor computation to multiple workers under the coordination of a central server, which enables jointly learning the phenotypes across multiple hospitals while preserving the privacy of the…
University of Eastern Finland（东芬兰大学）；KTH Royal Institute of Technology（瑞典皇家理工学院）；University of Vienna（维也纳大学）
The goal of Boolean Matrix Factorization (BMF) is to approximate a given binary matrix as the product of two low-rank binary factor matrices, where the product of the factor matrices is computed under the Boolean algebra. While the problem is computationally hard, it is also attractive because the binary nature of the factor matrices makes them highly interpretable. In the last decade, BMF has received a considerable amount of attention in the data mining and formal concept analysis communities and, more recently, the machine learning and the theory communities also started studying BMF. In th…
We consider the problem of training a deep orthogonal linear network, which consists of a product of orthogonal matrices, with no non-linearity in-between. We show that training the weights with Riemannian gradient descent is equivalent to training the whole factorization by gradient descent. This means that there is no effect of overparametrization and implicit bias at all in this setting: training such a deep, overparametrized, network is perfectly equivalent to training a one-layer shallow network.
EPFL（洛桑联邦理工学院）；Swiss Data Science Center（瑞士数据科学中心）；ETHZ（苏黎世联邦理工学院）
We propose Deep Feature Factorization (DFF), a method capable of localizing similar semantic concepts within an image or a set of images. We use DFF to gain insight into a deep convolutional neural network's learned features, where we detect hierarchical cluster structures in feature space. This is visualized as heat maps, which highlight semantically matching regions across a set of images, revealing what the network `perceives' as similar. DFF can also be used to perform co-segmentation and co-localization, and we report state-of-the-art results on these tasks.
School of Computer Science and Technology, Soochow University（苏州大学计算机科学与技术学院）；Department of Computer Science, University of Georgia（佐治亚大学计算机科学系）
Concept Factorization (CF) and its variants may produce inaccurate representation and clustering results due to the sensitivity to noise, hard constraint on the reconstruction error and pre-obtained approximate similarities. To improve the representation ability, a novel unsupervised Robust Flexible Auto-weighted Local-coordinate Concept Factorization (RFA-LCF) framework is proposed for clustering high-dimensional data. Specifically, RFA-LCF integrates the robust flexible CF by clean data space recovery, robust sparse local-coordinate coding and adaptive weighting into a unified model. RFA-LCF…
Advertising and feed ranking are essential to many Internet companies such as Facebook and Sina Weibo. Among many real-world advertising and feed ranking systems, click through rate (CTR) prediction plays a central role. There are many proposed models in this field such as logistic regression, tree based models, factorization machine based models and deep learning based CTR models. However, many current works calculate the feature interactions in a simple way such as Hadamard product and inner product and they care less about the importance of features. In this paper, a new model named FiBiNET…
Inductive rule learning is arguably among the most traditional paradigms in machine learning. Although we have seen considerable progress over the years in learning rule-based theories, all state-of-the-art learners still learn descriptions that directly relate the input features to the target concept. In the simplest case, concept learning, this is a disjunctive normal form (DNF) description of the positive class. While it is clear that this is sufficient from a logical point of view because every logical expression can be reduced to an equivalent DNF expression, it could nevertheless be the …
Concept Factorization via Self-Representation and Adaptive Graph Structure Learning
Department of Computer Science and Technology, Chongqing University of Posts and Telecommunications（重庆邮电大学计算机科学与技术学院）；College of Computer and Information Science, Southwest University（西南大学计算机与信息科学学院）；School of Cyber Science and Technology, Beihang University（北航信息科学与技术学院）
Combining simple elements from the literature, we define a linear model that is geared toward sparse data, in particular implicit feedback data for recommender systems. We show that its training objective has a closed-form solution, and discuss the resulting conceptual insights. Surprisingly, this simple model achieves better ranking accuracy than various state-of-the-art collaborative-filtering approaches, including deep non-linear models, on most of the publicly available data-sets used in our experiments.
Incremental Learning (IL) is an interesting AI problem when the algorithm is assumed to work on a budget. This is especially true when IL is modeled using a deep learning approach, where two com- plex challenges arise due to limited memory, which induces catastrophic forgetting and delays related to the retraining needed in order to incorpo- rate new classes. Here we introduce DeeSIL, an adaptation of a known transfer learning scheme that combines a fixed deep representation used as feature extractor and learning independent shallow classifiers to in- crease recognition capacity. This scheme t…
Neural Collapse under Gradient Flow on Shallow ReLU Networks for Orthogonally Separable Data
Institute of Natural Sciences & School of Mathematical Sciences, Shanghai Jiao Tong University（上海交通大学自然科学研究院与数学科学学院）；Computer Science and Engineering, Ohio State University（俄亥俄州立大学计算机科学与工程系）；Electrical and Systems Engineering & Department of Radiology, University of Pennsylvania（宾夕法尼亚大学电气与系统工程系及放射学系）
Many predictive tasks of web applications need to model categorical variables, such as user IDs and demographics like genders and occupations. To apply standard machine learning techniques, these categorical predictors are always converted to a set of binary features via one-hot encoding, making the resultant feature vector highly sparse. To learn from such sparse data effectively, it is crucial to account for the interactions between features. Factorization Machines (FMs) are a popular solution for efficiently using the second-order feature interactions. However, FM models feature interaction…
