Fully symmetric learning rules for principal component analysis can be derived from a novel objective function suggested in our previous work. We observed that these learning rules suffer from slow convergence for covariance matrices where some principal eigenvalues are close to each other. Here we describe a modified objective function with an additional term which mitigates this convergence problem. We show that the learning rule derived from the modified objective function inherits all fixed points from the original learning rule (but may introduce additional ones). Also the stability of the inherited fixed points remains unchanged. Only the steepness of the objective function is increased in some directions. Simulations confirm that the convergence speed can be noticeably improved, depending on the weight factor of the additional term.
Neural network models of early sensory processing typically reduce the dimensionality of streaming input data. Such networks learn the principal subspace, in the sense of principal component analysis (PCA), by adjusting synaptic weights according to activity-dependent learning rules. When derived from a principled cost function these rules are nonlocal and hence biologically implausible. At the same time, biologically plausible local rules have been postulated rather than derived from a principled cost function. Here, to bridge this gap, we derive a biologically plausible network for subspace …
A central roadblock to analyzing quantum algorithms on quantum states is the lack of a comparable input model for classical algorithms. Inspired by recent work of the author [E. Tang, STOC'19], we introduce such a model, where we assume we can efficiently perform $\ell^2$-norm samples of input data, a natural analogue to quantum algorithms that assume efficient state preparation of classical data. Though this model produces less practical algorithms than the (stronger) standard model of classical computation, it captures versions of many of the features and nuances of quantum linear algebra al…
SimulaMet（西穆拉大都会研究所）；Warsaw University of Technology（华沙理工大学）
Missing data is a commonly occurring problem in practice. Many imputation methods have been developed to fill in the missing entries. However, not all of them can scale to high-dimensional data, especially the multiple imputation techniques. Meanwhile, the data nowadays tends toward high-dimensional. Therefore, in this work, we propose Principal Component Analysis Imputation (PCAI), a simple but versatile framework based on Principal Component Analysis (PCA) to speed up the imputation process and alleviate memory issues of many available imputation techniques, without sacrificing the imputatio…
Flatiron Institute（熨斗研究院）；NYU Langone Medical School（纽约大学朗格尼医学院）
Finding informative low-dimensional representations that can be computed efficiently in large datasets is an important problem in data analysis. Recently, contrastive Principal Component Analysis (cPCA) was proposed as a more informative generalization of PCA that takes advantage of contrastive learning. However, the performance of cPCA is sensitive to hyper-parameter choice and there is currently no online algorithm for implementing cPCA. Here, we introduce a modified cPCA method, which we denote cPCA*, that is more interpretable and less sensitive to the choice of hyper-parameter. We derive …
Principal components analysis (PCA) is a widely used dimension reduction technique with an extensive range of applications. In this paper, an online distributed algorithm is proposed for recovering the principal eigenspaces. We further establish its rate of convergence and show how it relates to the number of nodes employed in the distributed computation, the effective rank of the data matrix under consideration, and the gap in the spectrum of the underlying population covariance matrix. The proposed algorithm is illustrated on low-rank approximation and $\boldsymbol{k}$-means clustering tasks…
We introduce primed-PCA (pPCA), a two-step algorithm for speeding up the approximation of principal components. This algorithm first runs any approximate-PCA method to get an initial estimate of the principal components (priming), and then applies an exact PCA in the subspace they span. Since this subspace is of small dimension in any practical use, the second step is extremely cheap computationally. Nonetheless, it improves accuracy significantly for a given computational budget across datasets. In this setup, the purpose of the priming is to narrow down the search space, and prepare the data…
Station Q, Microsoft Research（Station Q（微软研究院））；Microsoft Quantum and Microsoft Research（微软量子（微软研究院））
We present classical and quantum algorithms based on spectral methods for a problem in tensor principal component analysis. The quantum algorithm achieves a quartic speedup while using exponentially smaller space than the fastest classical spectral algorithm, and a super-polynomial speedup over classical algorithms that use only polynomial space. The classical algorithms that we present are related to, but slightly different from those presented recently in Ref. 1. In particular, we have an improved threshold for recovery and the algorithms we present work for both even and odd order tensors. …
We revisit the problem of robust principal component analysis with features acting as prior side information. To this aim, a novel, elegant, non-convex optimization approach is proposed to decompose a given observation matrix into a low-rank core and the corresponding sparse residual. Rigorous theoretical analysis of the proposed algorithm results in exact recovery guarantees with low computational complexity. Aptly designed synthetic experiments demonstrate that our method is the first to wholly harness the power of non-convexity over convexity in terms of both recoverability and speed. That …
We propose a framework of principal manifolds to model high-dimensional data. This framework is based on Sobolev spaces and designed to model data of any intrinsic dimension. It includes principal component analysis and principal curve algorithm as special cases. We propose a novel method for model complexity selection to avoid overfitting, eliminate the effects of outliers, and improve the computation speed. Additionally, we propose a method for identifying the interiors of circle-like curves and cylinder/ball-like surfaces. The proposed approach is compared to existing methods by simulations…
High dimensional regression benefits from sparsity promoting regularizations. Screening rules leverage the known sparsity of the solution by ignoring some variables in the optimization, hence speeding up solvers. When the procedure is proven not to discard features wrongly the rules are said to be \emph{safe}. In this paper we derive new safe rules for generalized linear models regularized with $\ell_1$ and $\ell_1/\ell_2$ norms. The rules are based on duality gap computations and spherical safe regions whose diameters converge to zero. This allows to discard safely more variables, in particul…
Recent years have witnessed intense development of randomized methods for low-rank approximation. These methods target principal component analysis (PCA) and the calculation of truncated singular value decompositions (SVD). The present paper presents an essentially black-box, fool-proof implementation for Mathworks' MATLAB, a popular software platform for numerical computation. As illustrated via several tests, the randomized algorithms for low-rank approximation outperform or at least match the classical techniques (such as Lanczos iterations) in basically all respects: accuracy, computationa…
Functional principal component analysis (FPCA) is a fundamental tool and has attracted increasing attention in recent decades, while existing methods are restricted to data with a single or finite number of random functions (much smaller than the sample size $n$). In this work, we focus on high-dimensional functional processes where the number of random functions $p$ is comparable to, or even much larger than $n$. Such data are ubiquitous in various fields such as neuroimaging analysis, and cannot be properly modeled by existing methods. We propose a new algorithm, called sparse FPCA, which is…
We present a novel technique for sparse principal component analysis. This method, named Eigenvectors from Eigenvalues Sparse Principal Component Analysis (EESPCA), is based on the formula for computing squared eigenvector loadings of a Hermitian matrix from the eigenvalues of the full matrix and associated sub-matrices. We explore two versions of the EESPCA method: a version that uses a fixed threshold for inducing sparsity and a version that selects the threshold via cross-validation. Relative to the state-of-the-art sparse PCA methods of Witten et al., Yuan & Zhang and Tan et al., the fixed…
The first order behavior of multivariate heavy-tailed random vectors above large radial thresholds is ruled by a limit measure in a regular variation framework. For a high dimensional vector, a reasonable assumption is that the support of this measure is concentrated on a lower dimensional subspace, meaning that certain linear combinations of the components are much likelier to be large than others. Identifying this subspace and thus reducing the dimension will facilitate a refined statistical analysis. In this work we apply Principal Component Analysis (PCA) to a re-scaled version of radially…
Principal component analysis (PCA) is a widely used dimension reduction tool in the analysis of many kind of high-dimensional data. It is used in signal processing, mechanical engineering, psychometrics, and other fields under different names. It still bears the same mathematical idea: the decomposition of variation of a high dimensional object into uncorrelated factors or components. However, in many of the above applications, one is interested in capturing the tail variables of the data rather than variation around the mean. Such applications include weather related event curves, expected sh…
This paper presents a practical, and theoretically well-founded, approach to improve the speed of kernel manifold learning algorithms relying on spectral decomposition. Utilizing recent insights in kernel smoothing and learning with integral operators, we propose Reduced Set KPCA (RSKPCA), which also suggests an easy-to-implement method to remove or replace samples with minimal effect on the empirical operator. A simple data point selection procedure is given to generate a substitute density for the data, with accuracy that is governed by a user-tunable parameter . The effect of the approximat…
Case Western Reserve University（凯斯西储大学）；Florida International University（佛罗里达国际大学）；Kent State University（肯特州立大学）；National Institute on Aging, National Institute of Health（美国国立卫生研究院国家老龄化研究所）；Fordham University（福特汉姆大学）
This paper presents a sublinear classical algorithm for principal component regression. The algorithm uses quantum-inspired linear algebra, an idea developed by Tang. Using this technique, her algorithm for recommendation systems achieved runtime only polynomially slower than its quantum counterpart. Her work was quickly adapted to solve many other problems in sublinear time complexity. In this work, we developed an algorithm for principal component regression that runs in time polylogarithmic to the number of data points, an exponential speed up over the state-of-the-art algorithm, under the …
Unsupervised ranking faces one critical challenge in evaluation applications, that is, no ground truth is available. When PageRank and its variants show a good solution in related subjects, they are applicable only for ranking from link-structure data. In this work, we focus on unsupervised ranking from multi-attribute data which is also common in evaluation tasks. To overcome the challenge, we propose five essential meta-rules for the design and assessment of unsupervised ranking approaches: scale and translation invariance, strict monotonicity, linear/nonlinear capacities, smoothness, and ex…
Principal Components Analysis is a widely used technique for dimension reduction and characterization of variability in multivariate populations. Our interest lies in studying when and why the rotation to principal components can be used effectively within a response-predictor set relationship in the context of mode hunting. Specifically focusing on the Patient Rule Induction Method (PRIM), we first develop a fast version of this algorithm (fastPRIM) under normality which facilitates the theoretical studies to follow. Using basic geometrical arguments, we then demonstrate how the PC rotation o…
University of Toronto（多伦多大学）；Vector Institute（向量研究所）
Our understanding of learning input-output relationships with neural nets has improved rapidly in recent years, but little is known about the convergence of the underlying representations, even in the simple case of linear autoencoders (LAEs). We show that when trained with proper regularization, LAEs can directly learn the optimal representation -- ordered, axis-aligned principal components. We analyze two such regularization schemes: non-uniform $\ell_2$ regularization and a deterministic variant of nested dropout [Rippel et al, ICML' 2014]. Though both regularization schemes converge to the…
