The four-parameter Johnson's SB (JSB) and three-parameter Weibull distributions have received much attention in the field of forestry for characterizing diameters at breast height (DBH). In this work, we suggest the Bayesian method for estimating parameters of the JBS distribution. The maximum likelihood approach uses iterative methods such as Newton-Raphson (NR) algorithm for maximizing the logarithm of the likelihood function. But there is no guarantee that the NR method converges. This fact that the NR method for estimating the parameters of the JSB distribution sometimes fails to converge was verified through simulation in this study. Further, it was shown that the Bayesian estimators presented in this work were robust with respect to the initial values and estimate the parameters of the JSB distribution efficiently. The performance of the JSB and three-parameter Weibull distributions was compared in a Bayesian paradigm when these models were fitted to DBH data of three plots that randomly selected from a study established in 107 plots of mixed-age ponderosa pine (Pinus ponderosa Dougl. ex Laws.) with scattered western junipers at the Malheur National Forest in south end of the Blue Mountains near Burns, Oregon, USA. Bayesian paradigm demonstrated that JBS was superior model than the three-parameter Weibull for characterizing the DBH distribution when these models were fitted to the DBH data of the three plots.
The Kumaraswamy Inverse Weibull distribution has the ability to model failure rates that have unimodal shapes and are quite common in reliability and biological studies. The three-parameter Kumaraswamy Inverse Weibull distribution with decreasing and unimodal failure rate is introduced. We provide a comprehensive treatment of the mathematical properties of the Kumaraswany Inverse Weibull distribution and derive expressions for its moment generating function and the $r$-th generalized moment. Some properties of the model with some graphs of density and hazard function are discussed. We also dis…
This paper develops a Bayesian control chart for the percentiles of the Weibull distribution, when both its in-control and out-of-control parameters are unknown. The Bayesian approach enhances parameter estimates for small sample sizes that occur when monitoring rare events as in high-reliability applications or genetic mutations. The chart monitors the parameters of the Weibull distribution directly, instead of transforming the data as most Weibull-based charts do in order to comply with their normality assumption. The chart uses the whole accumulated knowledge resulting from the likelihood o…
Estimation of reliability and hazard rate is one of the most important problems raised in many applications especially in engineering studies as well as human lifetime. In this regard, different methods of estimation have been used. Each method exploits various tools and suffers from problems such as complexity of computations, low precision, and so forth. This study is employed the E-Bayesian method, for estimating the parameter and survival functions of the Weibull Generalized Exponential distribution. The estimators are obtained under squared error and LINEX loss functions under progressive…
In this paper we study bayesian analysis of Modified Weibull distribution under progressively censored competing risk model. This study is made for progressively censored data. We use deterministic scan Gibbs sampling combined with slice sampling to generate from the posterior distribution. Posterior distribution is formed by taking prior distribution as reference prior. A real life data analysis is shown for illustrative purpose.
In this paper, a Bayesian accelerated life testing model is presented. The Weibull distribution is used as the life distribution and the generalised Eyring model as the time transformation function. This is a model that allows for the use of more than one stressor, whereas other commonly used acceleration models, such as the Arrhenius and power law models, allow for only one stressor. The generalised Eyring-Weibull model is used in an application, where MCMC methods are utilised to generate samples for posterior inference.
In this paper, we present a Weibull link (skewed) model for categorical response data arising from binomial as well as multinomial model. We show that, for such types of categorical data, the most commonly used models (logit, probit and complementary log-log) can be obtained as limiting cases. We further compare the proposed model with some other asymmetrical models. The Bayesian as well as frequentist estimation procedures for binomial and multinomial data responses are presented in details. The analysis of two data sets to show the efficiency of the proposed model is performed.
This paper presents a hierarchical Bayesian approach to the estimation of components' reliability (survival) using a Weibull model for each of them. The proposed method can be used to estimation with general survival censored data, because the estimation of a component's reliability in a series (parallel) system is equivalent to the estimation of its survival function with right- (left-) censored data. Besides the Weibull parametric model for reliability data, independent gamma distributions are considered at the first hierarchical level for the Weibull parameters and independent uniform distr…
Discrete data are collected in many application areas and are often characterised by highly skewed and power-lawlike distributions. An example of this, which is considered in this paper, is the number of visits to a specialist, often taken as a measure of demand in healthcare. A discrete Weibull regression model was recently proposed for regression problems with a discrete response and it was shown to possess two important features: the ability to capture over and under-dispersion simultaneously and a closed-form analytical expression of the quantiles of the conditional distribution. In this p…
This paper presents a complete methodology for Bayesian inference on a semi-Markov process, from the elicitation of the prior distribution, to the computation of posterior summaries, including a guidance for its JAGS implementation. The holding times (conditional on the transition between two given states) are assumed to be Weibull-distributed. We examine the elicitation of the joint prior density of the shape and scale parameters of the Weibull distributions, deriving a specific class of priors in a natural way, along with a method for the determination of hyperparameters based on ``learning …
The connection between Bayesian neural networks and Gaussian processes gained a lot of attention in the last few years. Hidden units are proven to follow a Gaussian process limit when the layer width tends to infinity. Recent work has suggested that finite Bayesian neural networks may outperform their infinite counterparts because they adapt their internal representations flexibly. To establish solid ground for future research on finite-width neural networks, our goal is to study the prior induced on hidden units. Our main result is an accurate description of hidden units tails which shows tha…
Based on expert opinions, informative prior elicitation for the common Weibull lifetime distribution usually presents some difficulties since it requires to elicit a two-dimensional joint prior. We consider here a reliability framework where the available expert information states directly in terms of prior predictive values (lifetimes) and not parameter values, which are less intuitive. The novelty of our procedure is to weigh the expert information by the size m of a virtual sample yielding a similar information, the prior being seen as a reference posterior. Thus, the prior calibration by t…
The aim of the present work is to investigate the performances of a specific Bayesian control chart used to compare two processes. The chart monitors the ratio of the percentiles of a key characteristic associated with the processes. The variability of such a characteristic is modeled via the Weibull distribution and a practical Bayesian approach to deal with Weibull data is adopted. The percentiles of the two monitored processes are assumed to be independent random variables. The Weibull distributions of the key characteristic of both processes are assumed to have the same and stable shape pa…
Bayesian spatial modeling of heavy-tailed distributions has become increasingly popular in various areas of science in recent decades. We propose a Weibull regression model with spatial random effects for analyzing extreme economic loss. Model estimation is facilitated by a computationally efficient Bayesian sampling algorithm utilizing the multivariate Log-Gamma distribution. Simulation studies are carried out to demonstrate better empirical performances of the proposed model than the generalized linear mixed effects model. An earthquake data obtained from Yunnan Seismological Bureau, China i…
An evaluation of FBST, Fully Bayesian Significance Test, restricted to survival models is the main objective of the present paper. A Survival distribution should be chosen among the tree celebrated ones, lognormal, gamma, and Weibull. For this discrimination, a linear mixture of the three distributions, for which the mixture weights are defined by a Dirichlet distribution of order three, is an important tool: the FBST is used to test the hypotheses defined on the mixture weights space. Another feature of the paper is that all three distributions are reparametrized in that all the six parameter…
Estimating the duration of user behavior is a central concern for most internet companies. Survival analysis is a promising method for analyzing the expected duration of events and usually assumes the same survival function for all subjects and the event will occur in the long run. However, such assumptions are inappropriate when the users behave differently or some events never occur for some users, i.e., the conversion period on web services of the light users with no intention of behaving actively on the service. Especially, if the proportion of inactive users is high, this assumption can l…
We propose the notion of sub-Weibull distributions, which are characterised by tails lighter than (or equally light as) the right tail of a Weibull distribution. This novel class generalises the sub-Gaussian and sub-Exponential families to potentially heavier-tailed distributions. Sub-Weibull distributions are parameterized by a positive tail index $θ$ and reduce to sub-Gaussian distributions for $θ=1/2$ and to sub-Exponential distributions for $θ=1$. A characterisation of the sub-Weibull property based on moments and on the moment generating function is provided and properties of the class ar…
This note introduces a new Bayesian control chart to compare two processes by monitoring the ratio of their percentiles under Weibull assumption. Both in-control and out-of-control parameters are supposed unknown. The chart analyses the sampling data directly, instead of transforming them in order to comply with the usual normality assumption, as most charts do. The chart uses the whole accumulated knowledge, resulting from the current and all the past samples, to monitor the current value of the ratio. Two real applications in the wood industry and in the concrete industry give a first pictur…
In the 1920's, the English philosopher W.E. Johnson introduced a characterization of the symmetric Dirichlet prior distribution in terms of its predictive distribution. This is typically referred to as Johnson's "sufficientness" postulate, and it has been the subject of many contributions in Bayesian statistics, leading to predictive characterization for infinite-dimensional generalizations of the Dirichlet distribution, i.e. species-sampling models. In this paper, we review "sufficientness" postulates for species-sampling models, and then investigate analogous predictive characterizations for…
In reliability engineering, data about failure events is often scarce. To arrive at meaningful estimates for the reliability of a system, it is therefore often necessary to also include expert information in the analysis, which is straightforward in the Bayesian approach by using an informative prior distribution. A problem called prior-data conflict then can arise: observed data seem very surprising from the viewpoint of the prior, i.e., information from data is in conflict with prior assumptions. Models based on conjugate priors can be insensitive to prior-data conflict, in the sense that th…
The stratified proportional hazards model represents a simple solution to account for heterogeneity within the data while keeping the multiplicative effect on the hazard function. Strata are typically defined a priori by resorting to the values taken by a categorical covariate. A general framework is proposed, which allows for the stratification of a generic accelerated life time model, including as a special case the Weibull proportional hazard model. The stratification is determined a posteriori by taking into account that strata might be characterized by different baseline survivals as well…
Analysis of competing risks data plays an important role in the lifetime data analysis. Recently Feizjavadian and Hashemi (Computational Statistics and Data Analysis, vol. 82, 19-34, 2015) provided a classical inference of a competing risks data set using four-parameter Marshall-Olkin bivariate Weibull distribution when the failure of an unit at a particular time point can happen due to more than one cause. The aim of this paper is to provide the Bayesian analysis of the same model based on a very flexible Gamma-Dirichlet prior on the scale parameters. It is observed that the Bayesian inferenc…
The problem of transformation selection is thoroughly treated from a Bayesian perspective. Several families of transformations are considered with a view to achieving normality: the Box-Cox, the Modulus, the Yeo & Johnson and the Dual transformation. Markov chain Monte Carlo algorithms have been constructed in order to sample from the posterior distribution of the transformation parameter $λ_T$ associated with each competing family $T$. We investigate different approaches to constructing compatible prior distributions for $λ_T$ over alternative transformation families, using a unit-information…
Xidian University（西安电子科技大学）；The University of Texas at Austin（德克萨斯大学奥斯汀分校）
To build a flexible and interpretable model for document analysis, we develop deep autoencoding topic model (DATM) that uses a hierarchy of gamma distributions to construct its multi-stochastic-layer generative network. In order to provide scalable posterior inference for the parameters of the generative network, we develop topic-layer-adaptive stochastic gradient Riemannian MCMC that jointly learns simplex-constrained global parameters across all layers and topics, with topic and layer specific learning rates. Given a posterior sample of the global parameters, in order to efficiently infer th…
A major issue of extreme value analysis is the determination of the shape parameter $ξ$ common to Generalized Extreme Value (GEV) and Generalized Pareto (GP) distributions, which drives the tail behavior, and is of major impact on the estimation of return levels and periods. Many practitioners make the choice of a Bayesian framework to conduct this assessment for accounting of parametric uncertainties, which are typically high in such analyses characterized by a low number of observations. Nonetheless, such approaches can provide large credibility domains for $ξ$, including negative and positi…
Usually, methods evaluating system reliability require engineers to quantify the reliability of each of the system components. For series and parallel systems, there are some options to handle the estimation of each component's reliability. We will treat the reliability estimation of complex problems of two classes of coherent systems: series-parallel, and parallel-series. In both of the cases, the component reliabilities may be unknown. We will present estimators for reliability functions at all levels of the system (component and system reliabilities). Nonparametric Bayesian estimators of al…
Despite their widespread use in practice, the asymptotic properties of Bayesian penalized splines have not been investigated so far. We close this gap and study posterior concentration rates for Bayesian penalized splines in a Gaussian nonparametric regression model. A key feature of the approach is the hyperprior on the smoothing variance, which allows for adaptive smoothing in practice but complicates the theoretical analysis considerably as it destroys conjugacy and precludes analytic expressions for the posterior moments. To derive our theoretical results, we rely on several new concepts i…
Bayesian joint modelling of longitudinal biomarkers to enable extrapolation of overall survival: an application using larotrectinib trial clinical data
Visible Analytics；Bayer Pharmaceuticals（拜耳制药）；University Medical Centre Hamburg Eppendorf（汉堡埃普多夫大学医学中心）；University Cancer Institute and the Department of Oncology, University Hospital Fundacion Jimenez Diaz, Autonomous University（胡安·希梅内斯·迪亚兹基金会大学医院肿瘤科及癌症研究所，自治大学）；Institut Bergonié（贝尔戈涅研究所）；Gustave Roussy Comprehensive Cancer Center（古斯塔夫·鲁西综合癌症中心）；Department of Statistics, University of Warwick（华威大学统计系）
Univ. Grenoble Alpes（格勒诺布尔阿尔卑斯大学）；Inria（法国国家信息与自动化研究所）；CNRS（法国国家科学研究中心）；Grenoble INP（格勒诺布尔国立高等物理、数学与信息学院）；Moscow Institute of Physics and Technology（莫斯科物理技术学院）；Andalusian Research Institute in Data Science and Computational Intelligence (DaSCI)（安达卢西亚数据科学与计算智能研究所）；University of Granada（格拉纳达大学）
We investigate deep Bayesian neural networks with Gaussian weight priors and a class of ReLU-like nonlinearities. Bayesian neural networks with Gaussian priors are well known to induce an L2, "weight decay", regularization. Our results characterize a more intricate regularization effect at the level of the unit activations. Our main result establishes that the induced prior distribution on the units before and after activation becomes increasingly heavy-tailed with the depth of the layer. We show that first layer units are Gaussian, second layer units are sub-exponential, and units in deeper l…
We introduce a natural conjugate prior for the transition matrix of a reversible Markov chain. This allows estimation and testing. The prior arises from random walk with reinforcement in the same way the Dirichlet prior arises from Pólya's urn. We give closed form normalizing constants, a simple method of simulation from the posterior and a characterization along the lines of W. E. Johnson's characterization of the Dirichlet prior.
The Weibull distribution, with shape parameter $k>0$ and scale parameter $λ>0$, is one of the most popular parametric distributions in survival analysis with complete or censored data. Although inference of the parameters of the Weibull distribution is commonly done through maximum likelihood, it is well established that the maximum likelihood estimate of the shape parameter is inadequate due to the associated large bias when the sample size is small or the proportion of censored data is large. This manuscript demonstrates how the Bayesian information-theoretic minimum message length principle…
The University of Texas at Austin（德克萨斯大学奥斯汀分校）；Xidian University（西安电子科技大学）
Attention-based neural networks have achieved state-of-the-art results on a wide range of tasks. Most such models use deterministic attention while stochastic attention is less explored due to the optimization difficulties or complicated model design. This paper introduces Bayesian attention belief networks, which construct a decoder network by modeling unnormalized attention weights with a hierarchy of gamma distributions, and an encoder network by stacking Weibull distributions with a deterministic-upward-stochastic-downward structure to approximate the posterior. The resulting auto-encoding…
Bayesian joint modeling of longitudinal patient-reported outcomes and survival: an application to chronic obstructive pulmonary disease
Basque Center for Applied Mathematics BCAM（巴斯克应用数学中心）；University of the Basque Country UPV/EHU（巴斯克大学）；MRC Biostatistics Unit, University of Cambridge（剑桥大学医学研究委员会生物统计学单位）；IE University（IE大学）
Bayesian model selection poses two main challenges: the specification of parameter priors for all models, and the computation of the resulting Bayes factors between models. There is now a large literature on automatic and objective parameter priors in the linear model. One important class are $g$-priors, which were recently extended from linear to generalized linear models (GLMs). We show that the resulting Bayes factors can be approximated by test-based Bayes factors (Johnson [Scand. J. Stat. 35 (2008) 354-368]) using the deviance statistics of the models. To estimate the hyperparameter $g$, …
Positivity of the prior probability of Kullback-Leibler neighborhood around the true density, commonly known as the Kullback-Leibler property, plays a fundamental role in posterior consistency. A popular prior for Bayesian estimation is given by a Dirichlet mixture, where the kernels are chosen depending on the sample space and the class of densities to be estimated. The Kullback-Leibler property of the Dirichlet mixture prior has been shown for some special kernels like the normal density or Bernstein polynomial, under appropriate conditions. In this paper, we obtain easily verifiable suffici…
Tests of separate families of hypotheses were initially considered by Cox (1961,1962) In this work, the Fully Bayesian Significance Test, FBST, is evaluated for discriminating between the lognormal, gamma and Weibull models whose families of distributions are separate. Considering a linear mixture model including all candidate distributions, the FBST tests the hypotheses on the mixture weights in order to calculate the evidence measure in favor of each one. Additionally, the density functions of the mixture components are reparametrized in terms of the common parameters, the mean and the varia…
The analysis of progressively censored data has received considerable attention in the last few years. In this paper we consider the joint progressive censoring scheme for two populations. It is assumed that the lifetime distribution of the items from the two populations follow Weibull distribution with the same shape but different scale parameters. Based on the joint progressive censoring scheme first we consider the maximum likelihood estimators of the unknown parameters whenever they exist. We provide the Bayesian inferences of the unknown parameters under a fairly general priors on the sha…
Applying the Weibull Shape Parameter test for signal detection in pharmacovigilance using the R package WSPsignal
Biostatistics and Medical Biometry, Medical School OWL, Bielefeld University（比勒费尔德大学OWL医学院生物统计与医学生物计量学）；School of Public Health, Bielefeld University（比勒费尔德大学公共卫生学院）；Department of Business Administration and Economics, Bielefeld University（比勒费尔德大学工商管理经济学系）
Robust Survival Estimation under Interval Censoring: Expectation-Maximization and Bayesian Accelerated Failure Time Assessment via Simulation and Application
We built a novel Bayesian hierarchical survival model based on the somatic mutation profile of patients across 50 genes and 27 cancer types. The pan-cancer quality allows for the model to "borrow" information across cancer types, motivated by the assumption that similar mutation profiles may have similar (but not necessarily identical) effects on survival across different tissues-of-origin or tumor types. The effect of a mutation at each gene was allowed to vary by cancer type while the mean effect of each gene was shared across cancers. Within this framework we considered four parametric surv…
Under adaptive progressive Type-II censoring schemes, order restricted inference based on competing risks data is discussed in this article. The latent failure lifetimes for the competing causes are assumed to follow Weibull distributions, with an order restriction on the scale parameters of the distributions. The practical implication of this order restriction is that one of the risk factors is dominant, as often observed in competing risks scenarios. In this setting, likelihood estimation for the model parameters, along with bootstrap based techniques for constructing asymptotic confidence i…
Human infants can discover words directly from unsegmented speech signals without any explicitly labeled data. In this paper, we develop a novel machine learning method called nonparametric Bayesian double articulation analyzer (NPB-DAA) that can directly acquire language and acoustic models from observed continuous speech signals. For this purpose, we propose an integrative generative model that combines a language model and an acoustic model into a single generative model called the "hierarchical Dirichlet process hidden language model" (HDP-HLM). The HDP-HLM is obtained by extending the hie…
The use of objective prior in Bayesian applications has become a common practice to analyze data without subjective information. Formal rules usually obtain these priors distributions, and the data provide the dominant information in the posterior distribution. However, these priors are typically improper and may lead to improper posterior. Here, we show, for a general family of distributions, that the obtained objective priors for the parameters either follow a power-law distribution or has an asymptotic power-law behavior. As a result, we observed that the exponents of the model are between …
While the hurdle Poisson regression is a popular class of models for count data with excessive zeros, the link function in the binary component may be unsuitable for highly imbalanced cases. Ordinary Poisson regression is unable to handle the presence of dispersion. In this paper, we introduce Conway-Maxwell-Poisson (CMP) distribution and integrate use of flexible skewed Weibull link functions as better alternative. We take a fully Bayesian approach to draw inference from the underlying models to better explain skewness and quantify dispersion, with Deviance Information Criteria (DIC) used for…
