We introduce a one-shot segmentation method to alleviate the burden of manual annotation for medical images. The main idea is to treat one-shot segmentation as a classical atlas-based segmentation problem, where voxel-wise correspondence from the atlas to the unlabelled data is learned. Subsequently, segmentation label of the atlas can be transferred to the unlabelled data with the learned correspondence. However, since ground truth correspondence between images is usually unavailable, the learning system must be well-supervised to avoid mode collapse and convergence failure. To overcome this difficulty, we resort to the forward-backward consistency, which is widely used in correspondence problems, and additionally learn the backward correspondences from the warped atlases back to the original atlas. This cycle-correspondence learning design enables a variety of extra, cycle-consistency-based supervision signals to make the training process stable, while also boost the performance. We demonstrate the superiority of our method over both deep learning-based one-shot segmentation methods and a classical multi-atlas segmentation method via thorough experiments.
Samsung Electronics（三星电子）；Seoul National University（首尔国立大学）；Soongsil University（崇实大学）
Semi-supervised learning for medical image segmentation is an important area of research for alleviating the huge cost associated with the construction of reliable large-scale annotations in the medical domain. Recent semi-supervised approaches have demonstrated promising results by employing consistency regularization, pseudo-labeling techniques, and adversarial learning. These methods primarily attempt to learn the distribution of labeled and unlabeled data by enforcing consistency in the predictions or embedding context. However, previous approaches have focused only on local discrepancy mi…
Nanjing University of Aeronautics and Astronautics（南京航空航天大学）；Lingnan University（岭南大学）；Hong Kong Metropolitan University（香港都会大学）；The Education University of Hong Kong（香港教育大学）；Shenzhen Research Institute, Nanjing University of Aeronautics and Astronautics（南京航空航天大学深圳研究院）
Large imbalance often exists between the foreground points (i.e., objects) and the background points in outdoor LiDAR point clouds. It hinders cutting-edge detectors from focusing on informative areas to produce accurate 3D object detection results. This paper proposes a novel object detection network by semantical point-voxel feature interaction, dubbed PV-RCNN++. Unlike most of existing methods, PV-RCNN++ explores the semantic information to enhance the quality of object detection. First, a semantic segmentation module is proposed to retain more discriminative foreground keypoints. Such a mo…
Tsinghua University（清华大学）；Microsoft Research Asia（微软亚洲研究院）
Sparse voxel-based 3D convolutional neural networks (CNNs) are widely used for various 3D vision tasks. Sparse voxel-based 3D CNNs create sparse non-empty voxels from the 3D input and perform 3D convolution operations on them only. We propose a simple yet effective padding scheme --- interpolation-aware padding to pad a few empty voxels adjacent to the non-empty voxels and involve them in the 3D CNN computation so that all neighboring voxels exist when computing point-wise features via the trilinear interpolation. For fine-grained 3D vision tasks where point-wise features are essential, like s…
Seoul National University（首尔国立大学）；Soongsil University（崇实大学）
Recent works in medical image segmentation have actively explored various deep learning architectures or objective functions to encode high-level features from volumetric data owing to limited image annotations. However, most existing approaches tend to ignore cross-volume global context and define context relations in the decision space. In this work, we propose a novel voxel-level Siamese representation learning method for abdominal multi-organ segmentation to improve representation space. The proposed method enforces voxel-wise feature relations in the representation space for leveraging li…
Artificial Intelligence Research Institute (AIRI)（人工智能研究院（AIRI））；Moscow Institute of Physics and Technology（莫斯科物理技术学院）；Skolkovo Institute of Science and Technology（斯科尔科沃科学技术研究院）
When applying a Deep Learning model to medical images, it is crucial to estimate the model uncertainty. Voxel-wise uncertainty is a useful visual marker for human experts and could be used to improve the model's voxel-wise output, such as segmentation. Moreover, uncertainty provides a solid foundation for out-of-distribution (OOD) detection, improving the model performance on the image-wise level. However, one of the frequent tasks in medical imaging is the segmentation of distinct, local structures such as tumors or lesions. Here, the structure-wise uncertainty allows more precise operations …
Yale University（耶鲁大学）；The University of Texas at Austin（德克萨斯大学奥斯汀分校）
Contrastive learning (CL) aims to learn useful representation without relying on expert annotations in the context of medical image segmentation. Existing approaches mainly contrast a single positive vector (i.e., an augmentation of the same image) against a set of negatives within the entire remainder of the batch by simply mapping all input features into the same constant vector. Despite the impressive empirical performance, those methods have the following shortcomings: (1) it remains a formidable challenge to prevent the collapsing problems to trivial solutions; and (2) we argue that not a…
The Chinese University of Hong Kong（香港中文大学）；The University of Hong Kong（香港大学）；MEGVII Technology（旷视科技）；SmartMore（思谋科技）
In this work, we present a conceptually simple yet effective framework for cross-modality 3D object detection, named voxel field fusion. The proposed approach aims to maintain cross-modality consistency by representing and fusing augmented image features as a ray in the voxel field. To this end, the learnable sampler is first designed to sample vital features from the image plane that are projected to the voxel grid in a point-to-ray manner, which maintains the consistency in feature representation with spatial context. In addition, ray-wise fusion is conducted to fuse features with the supple…
We present a novel lightweight convolutional neural network for point cloud analysis. In contrast to many current CNNs which increase receptive field by downsampling point cloud, our method directly operates on the entire point sets without sampling and achieves good performances efficiently. Our network consists of point voxel convolution (PVC) layer as building block. Each layer has two parallel branches, namely the voxel branch and the point branch. For the voxel branch specifically, we aggregate local features on non-empty voxel centers to reduce geometric information loss caused by voxeli…
Yale University（耶鲁大学）；The University of Texas at Austin（德克萨斯大学奥斯汀分校）
Automated segmentation in medical image analysis is a challenging task that requires a large amount of manually labeled data. However, most existing learning-based approaches usually suffer from limited manually annotated medical data, which poses a major practical problem for accurate and robust medical image segmentation. In addition, most existing semi-supervised approaches are usually not robust compared with the supervised counterparts, and also lack explicit modeling of geometric structure and semantic information, both of which limit the segmentation accuracy. In this work, we present S…
We present Hybrid Voxel Network (HVNet), a novel one-stage unified network for point cloud based 3D object detection for autonomous driving. Recent studies show that 2D voxelization with per voxel PointNet style feature extractor leads to accurate and efficient detector for large 3D scenes. Since the size of the feature map determines the computation and memory cost, the size of the voxel becomes a parameter that is hard to balance. A smaller voxel size gives a better performance, especially for small objects, but a longer inference time. A larger voxel can cover the same area with a smaller f…
Fully convolutional networks (FCNs), including UNet and VNet, are widely-used network architectures for semantic segmentation in recent studies. However, conventional FCN is typically trained by the cross-entropy or Dice loss, which only calculates the error between predictions and ground-truth labels for pixels individually. This often results in non-smooth neighborhoods in the predicted segmentation. To address this problem, we propose a two-stage framework, with the first stage to quickly localize the prostate region and the second stage to precisely segment the prostate by a multi-task UNe…
In this article, we look into some essential aspects of convolutional neural networks (CNNs) with the focus on medical image segmentation. First, we discuss the CNN architecture, thereby highlighting the spatial origin of the data, voxel-wise classification and the receptive field. Second, we discuss the sampling of input-output pairs, thereby highlighting the interaction between voxel-wise classification, patch size and the receptive field. Finally, we give a historical overview of crucial changes to CNN architectures for classification and segmentation, giving insights in the relation betwee…
The autonomous car must recognize the driving environment quickly for safe driving. As the Light Detection And Range (LiDAR) sensor is widely used in the autonomous car, fast semantic segmentation of LiDAR point cloud, which is the point-wise classification of the point cloud within the sensor framerate, has attracted attention in recognition of the driving environment. Although the voxel and fusion-based semantic segmentation models are the state-of-the-art model in point cloud semantic segmentation recently, their real-time performance suffer from high computational load due to high voxel re…
Towards Voxel Spacing Consistency for Medical Image Segmentation
Institute of Medical Robotics, Shanghai Jiao Tong University（上海交通大学医疗机器人研究院）；Department of Ultrasound, Shanghai Chest Hospital（上海市胸科医院超声科）；CAMPAR, Technical University of Munich（慕尼黑工业大学CAMPAR）
Peking University（北京大学）；Beijing Institute of Technology（北京理工大学）；Max Planck Institute for Informatics（马克斯·普朗克信息学研究所）；Huawei Noah’s Ark Lab（华为诺亚方舟实验室）；Peng Cheng Laboratory（鹏城实验室）；Pazhou Laboratory (Huangpu)（琶洲实验室（黄埔））
We present a novel two-stage fully sparse convolutional 3D object detection framework, named CAGroup3D. Our proposed method first generates some high-quality 3D proposals by leveraging the class-aware local group strategy on the object surface voxels with the same semantic predictions, which considers semantic consistency and diverse locality abandoned in previous bottom-up approaches. Then, to recover the features of missed voxels due to incorrect voxel-wise segmentation, we build a fully sparse convolutional RoI pooling module to directly aggregate fine-grained spatial information from backb…
Shanghai Jiao Tong University（上海交通大学）；East China Normal University（华东师范大学）
Existing automatic 3D image segmentation methods usually fail to meet the clinic use. Many studies have explored an interactive strategy to improve the image segmentation performance by iteratively incorporating user hints. However, the dynamic process for successive interactions is largely ignored. We here propose to model the dynamic process of iterative interactive image segmentation as a Markov decision process (MDP) and solve it with reinforcement learning (RL). Unfortunately, it is intractable to use single-agent RL for voxel-wise prediction due to the large exploration space. To reduce …
We present an edge preserving and denoising filter for enhancing the features in images, which contain an ROI having a narrow spatial extent. Typical examples include angiograms, or ROI spatially distributed in multiple locations and contained within an outlying region, such as in multiple-sclerosis. The filtering involves determination of multiplicative weights in the spatial domain using an extended set of neighborhood directions. Equivalently, the filtering operation may be interpreted as a combination of directional filters in the frequency domain, with selective weighting for spatial freq…
Weakly Supervised Intracranial Hemorrhage Segmentation using Head-Wise Gradient-Infused Self-Attention Maps from a Swin Transformer in Categorical Learning
Shanghai Jiao Tong University（上海交通大学）；East China Normal University（华东师范大学）；Tongji University（同济大学）
Interactive segmentation has recently been explored to effectively and efficiently harvest high-quality segmentation masks by iteratively incorporating user hints. While iterative in nature, most existing interactive segmentation methods tend to ignore the dynamics of successive interactions and take each interaction independently. We here propose to model iterative interactive image segmentation with a Markov decision process (MDP) and solve it with reinforcement learning (RL) where each voxel is treated as an agent. Considering the large exploration space for voxel-wise prediction and the de…
The University of Sydney（悉尼大学）；JD Explore Academy（京东探索研究院）
Although point-based networks are demonstrated to be accurate for 3D point cloud modeling, they are still falling behind their voxel-based competitors in 3D detection. We observe that the prevailing set abstraction design for down-sampling points may maintain too much unimportant background information that can affect feature learning for detecting objects. To tackle this issue, we propose a novel set abstraction method named Semantics-Augmented Set Abstraction (SASA). Technically, we first add a binary segmentation module as the side output to help identify foreground points. Based on the est…
Fast Voxel-Wise Kinetic Modeling in Dynamic PET using a Physics-Informed CycleGAN
UiT The Arctic University of Norway（UiT极地大学）；University Hospital of North Norway（北挪威大学医院）；Norwegian Computing Center（挪威计算中心）；Univ. of Copenhagen（哥本哈根大学）；Korea Advanced Institute of Science and Technology（韩国科学技术院）
Classic algebraic reconstruction technology (ART) for computed tomography requires pre-determined weights of the voxels for projecting pixel values. However, such weight cannot be accurately obtained due to the limitation of the physical understanding and computation resources. In this study, we propose a semi-case-wise learning-based method named Weight Encode Reconstruction Network (WERNet) to tackle the issues mentioned above. The model is trained in a self-supervised manner without the label of a voxel set. It contains two branches, including the voxel weight encoder and the voxel attentio…
NV3D: Leveraging Spatial Shape Through Normal Vector-based 3D Object Detection
The School of Information, Computer, and Communication Technology, Sirindhorn International Institute of Technology, Thammasat University（信息、计算机与通信技术学院，Sirindhorn国际技术学院，泰国朱拉隆梭大学）；National Electronics and Computer Technology Center, National Science and Technology Development Agency（国家电子与计算机技术中心，国家科学技术发展局）；Department of Electrical Engineering, Faculty of Engineering, Chulalongkorn University（电气工程系，工程学院，朱拉隆梭大学）
Fudan University（复旦大学）；Institute of Science and Technology for Brain-Inspired Intelligence, Fudan University（复旦大学类脑智能科学与技术研究院）；Huashan Hospital, Fudan University（复旦大学附属华山医院）
Small lesions in magnetic resonance imaging (MRI) images are crucial for clinical diagnosis of many kinds of diseases. However, the MRI quality can be easily degraded by various noise, which can greatly affect the accuracy of diagnosis of small lesion. Although some methods for denoising MR images have been proposed, task-specific denoising methods for improving the diagnosis confidence of small lesions are lacking. In this work, we propose a voxel-wise hybrid residual MLP-CNN model to denoise three-dimensional (3D) MR images with small lesions. We combine basic deep learning architecture, MLP…
Sydney Nano Institute, University of Sydney（悉尼大学悉尼纳米研究所）；School of Computer Science, University of Sydney（悉尼大学计算机科学学院）；School of Computer Science and Engineering, University of New South Wales（新南威尔士大学计算机科学与工程学院）；Paige AI；Sydney Pharmacy School, University of Sydney（悉尼大学药学院）
Automatic 3D neuron reconstruction is critical for analysing the morphology and functionality of neurons in brain circuit activities. However, the performance of existing tracing algorithms is hinged by the low image quality. Recently, a series of deep learning based segmentation methods have been proposed to improve the quality of raw 3D optical image stacks by removing noises and restoring neuronal structures from low-contrast background. Due to the variety of neuron morphology and the lack of large neuron datasets, most of current neuron segmentation models rely on introducing complex and s…
CT-Guided Spatially-varying Regularization for Voxel-Wise Deformable Whole-Body PET Registration
Institute of Medical Technology, Peking University Health Science Center（北京大学医学部医学技术研究所）；Ren Ji Hospital, Shanghai Jiao Tong University（上海交通大学仁济医院）；University of Oxford（牛津大学）
Academy of information systems engineering, PLA strategy support force information engineering university（中国人民解放军战略支援部队信息工程大学信息系统工程学院）
Recently, visual encoding based on functional magnetic resonance imaging (fMRI) have realized many achievements with the rapid development of deep network computation. Visual encoding model is aimed at predicting brain activity in response to presented image stimuli. Currently, visual encoding is accomplished mainly by firstly extracting image features through convolutional neural network (CNN) model pre-trained on computer vision task, and secondly training a linear regression model to map specific layer of CNN features to each voxel, namely voxel-wise encoding. However, the two-step manner m…
Vox-UDA: Voxel-wise Unsupervised Domain Adaptation for Cryo-Electron Subtomogram Segmentation with Denoised Pseudo Labeling
School of Computing and Information Technology, University of Wollongong, Australia（澳大利亚卧龙岗大学计算与信息技术学院）；Ray and Stephanie Lane Computational Biology Department, Carnegie Mellon University, USA（美国卡内基梅隆大学莱恩计算生物学系）；Centre for Nutrition and Food Sciences, The University of Queensland, Australia（澳大利亚昆士兰大学营养与食品科学中心）；School of Electrical and Information Engineering, University of Sydney, Australia（澳大利亚悉尼大学电气与信息工程学院）；Department of Business Strategy and Innovation, Griffith University, Australia（澳大利亚格里菲斯大学商业战略与创新系）；Department of Biological Sciences, Purdue University, USA（美国普渡大学生物科学系）；NVIDIA, USA（美国英伟达公司）
Vesselpose: Vessel Graph Reconstruction from Learned Voxel-wise Direction Vectors in 3D Vascular Images
Max-Delbrueck-Center for Molecular Medicine in the Helmholtz Association（马克斯·德尔布鲁克医学研究中心（马克斯·德尔布鲁克医学研究中心））；Humboldt University of Berlin（柏林洪堡大学）；University of Potsdam（波茨坦大学）；Helmholtz Imaging（海德堡成像）；German Centre for Cardiovascular Research (DZHK)（德国心脏病研究中心（DZHK））；Experimental and Clinical Research Center (ECRC)（实验与临床研究中心（ECRC））
Nanjing University of Science and Technology（南京理工大学）；University of Oxford（牛津大学）；University of Wollongong（伍伦贡大学）；The University of Adelaide（阿德莱德大学）
As a voxel-wise labeling task, semantic scene completion (SSC) tries to simultaneously infer the occupancy and semantic labels for a scene from a single depth and/or RGB image. The key challenge for SSC is how to effectively take advantage of the 3D context to model various objects or stuffs with severe variations in shapes, layouts and visibility. To handle such variations, we propose a novel module called anisotropic convolution, which properties with flexibility and power impossible for the competing methods such as standard 3D convolution and some of its variations. In contrast to the stan…
Technical University of Munich（慕尼黑工业大学）；German Center for Neurodegenerative Diseases（德国神经退行性疾病中心）；Johns Hopkins University（约翰斯·霍普金斯大学）
We introduce Bayesian QuickNAT for the automated quality control of whole-brain segmentation on MRI T1 scans. Next to the Bayesian fully convolutional neural network, we also present inherent measures of segmentation uncertainty that allow for quality control per brain structure. For estimating model uncertainty, we follow a Bayesian approach, wherein, Monte Carlo (MC) samples from the posterior distribution are generated by keeping the dropout layers active at test time. Entropy over the MC samples provides a voxel-wise model uncertainty map, whereas expectation over the MC predictions provid…
University of Wisconsin-Madison（威斯康星大学麦迪逊分校）；The University of Warwick（华威大学）
Permutation testing is a non-parametric method for obtaining the max null distribution used to compute corrected $p$-values that provide strong control of false positives. In neuroimaging, however, the computational burden of running such an algorithm can be significant. We find that by viewing the permutation testing procedure as the construction of a very large permutation testing matrix, $T$, one can exploit structural properties derived from the data and the test statistics to reduce the runtime under certain conditions. In particular, we see that $T$ is low-rank plus a low-variance residu…
Quantib-U（Quantib-U公司）；Amsterdam University Medical Center（阿姆斯特丹大学医学中心）；University of Amsterdam（阿姆斯特丹大学）；University Medical Center Utrecht（乌得勒支大学医学中心）
Deep neural networks are increasingly used for pair-wise image registration. We propose to extend current learning-based image registration to allow simultaneous registration of multiple images. To achieve this, we build upon the pair-wise variational and diffeomorphic VoxelMorph approach and present a general mathematical framework that enables both registration of multiple images to their geodesic average and registration in which any of the available images can be used as a fixed image. In addition, we provide a likelihood based on normalized mutual information, a well-known image similarit…
Leibniz University Hannover（汉诺威莱布尼茨大学）；TU Dresden（德累斯顿工业大学）
In this paper, a novel framework for automated liver segmentation via a level set formulation is presented. A sparse representation of both global (region-based) and local (voxel-wise) image information is embedded in a level set formulation to innovate a new cost function. Two dictionaries are build: A region-based feature dictionary and a voxel-wise dictionary. These dictionaries are learned, using the K-SVD method, from a public database of liver segmentation challenge (MICCAI-SLiver07). The learned dictionaries provide prior knowledge to the level set formulation. For the quantitative eval…
In this paper, we tackle the problem of temporally consistent boundary detection and hierarchical segmentation in videos. While finding the best high-level reasoning of region assignments in videos is the focus of much recent research, temporal consistency in boundary detection has so far only rarely been tackled. We argue that temporally consistent boundaries are a key component to temporally consistent region assignment. The proposed method is based on the point-wise mutual information (PMI) of spatio-temporal voxels. Temporal consistency is established by an evaluation of PMI-based point af…
Deep learning (DL) networks have recently been shown to outperform other segmentation methods on various public, medical-image challenge datasets [3,11,16], especially for large pathologies. However, in the context of diseases such as Multiple Sclerosis (MS), monitoring all the focal lesions visible on MRI sequences, even very small ones, is essential for disease staging, prognosis, and evaluating treatment efficacy. Moreover, producing deterministic outputs hinders DL adoption into clinical routines. Uncertainty estimates for the predictions would permit subsequent revision by clinicians. We …
Interactive Test-Time Adaptation with Reliable Spatial-Temporal Voxels for Multi-Modal Segmentation
Centre for Advanced Robotics Technology Innovation (CARTIN), Nanyang Technological University（南洋理工大学先进机器人技术创新中心）；Department of Electrical and Computer Engineering, National University of Singapore（新加坡国立大学电气与计算机工程系）；School of Electrical and Electronic Engineering, Nanyang Technological University（南洋理工大学电气与电子工程学院）；School of Mechanical and Aerospace Engineering, Nanyang Technological University（南洋理工大学机械与航空航天工程学院）
Skolkovo Institute of Science and Technology（斯科尔科沃科学技术研究院）；Artificial Intelligence Research Institute (AIRI)（人工智能研究所（AIRI））；Institute for Information Transmission Problems（信息传输问题研究所）；Moscow Institute of Physics and Technology（莫斯科物理技术学院）
Deep neural networks have become the gold-standard approach for the automated segmentation of 3D medical images. Their full acceptance by clinicians remains however hampered by the lack of intelligible uncertainty assessment of the provided results. Most approaches to quantify their uncertainty, such as the popular Monte Carlo dropout, restrict to some measure of uncertainty in prediction at the voxel level. In addition not to be clearly related to genuine medical uncertainty, this is not clinically satisfying as most objects of interest (e.g. brain lesions) are made of groups of voxels whose …
A Quantitative Comparison of Epistemic Uncertainty Maps Applied to Multi-Class Segmentation
Erasmus MC（伊拉斯姆斯医学中心）；University Medical Center Utrecht（乌得勒支大学医学中心）；Academic Medical Center University of Amsterdam（阿姆斯特丹大学学术医学中心）；Maastricht University Medical Center（马斯特里赫特大学医学中心）；University of Copenhagen（哥本哈根大学）
University of New South Wales（新南威尔士大学）；UNSW Sydney（新南威尔士大学悉尼分校）；Prince of Wales Hospital（威尔士亲王医院）；Auckland City Hospital（奥克兰市医院）
Computed Tomography Coronary Angiography (CTCA) is a non-invasive method to evaluate coronary artery anatomy and disease. CTCA is ideal for geometry reconstruction to create virtual models of coronary arteries. To our knowledge there is no public dataset that includes centrelines and segmentation of the full coronary tree. We provide anonymized CTCA images, voxel-wise annotations and associated data in the form of centrelines, calcification scores and meshes of the coronary lumen in 20 normal and 20 diseased cases. Images were obtained along with patient information with informed, written cons…
South China University of Technology（华南理工大学）；University of Oulu（奥卢大学）；Huawei Noah’s Ark Lab（华为诺亚方舟实验室）
State-of-the-art single depth image-based 3D hand pose estimation methods are based on dense predictions, including voxel-to-voxel predictions, point-to-point regression, and pixel-wise estimations. Despite the good performance, those methods have a few issues in nature, such as the poor trade-off between accuracy and efficiency, and plain feature representation learning with local convolutions. In this paper, a novel pixel-wise prediction-based method is proposed to address the above issues. The key ideas are two-fold: a) explicitly modeling the dependencies among joints and the relations bet…
LMU München（慕尼黑大学）；Technische Universität München（慕尼黑工业大学）；German Center for Neurodegenerative Diseases (DZNE)（德国神经退行性疾病中心）；Johns Hopkins University（约翰斯·霍普金斯大学）
We introduce inherent measures for effective quality control of brain segmentation based on a Bayesian fully convolutional neural network, using model uncertainty. Monte Carlo samples from the posterior distribution are efficiently generated using dropout at test time. Based on these samples, we introduce next to a voxel-wise uncertainty map also three metrics for structure-wise uncertainty. We then incorporate these structure-wise uncertainty in group analyses as a measure of confidence in the observation. Our results show that the metrics are highly correlated to segmentation accuracy and th…
Voxel-wise classification for porosity investigation of additive manufactured parts with 3D unsupervised and (deeply) supervised neural networks
imec-Vision Lab（imec-Vision实验室）；University of Antwerp（安特卫普大学）；DynXlab: Center for 4D Quantitative X-ray Imaging and Analysis（DynXlab：四维定量X射线成像与分析中心）；Otto von Guericke University（奥托·冯·格里克大学）；Genomics Research Centre, Human Technopole（人类技术研究院基因组学研究中心）；Materialise NV.（Materialise NV.公司）；Flanders Make vzw.（佛兰德制造vzw.机构）
Lausanne University Hospital and University of Lausanne（洛桑大学医院和洛桑大学）；Center for Biomedical Imaging（生物医学成像中心）；Ecole Polytechnique Fédérale de Lausanne（洛桑联邦理工学院）
A commonly adopted approach to carry out detection tasks in medical imaging is to rely on an initial segmentation. However, this approach strongly depends on voxel-wise annotations which are repetitive and time-consuming to draw for medical experts. An interesting alternative to voxel-wise masks are so-called "weak" labels: these can either be coarse or oversized annotations that are less precise, but noticeably faster to create. In this work, we address the task of brain aneurysm detection as a patch-wise binary classification with weak labels, in contrast to related studies that rather use s…
Segmentation of 3D pore space from CT images using curvilinear skeleton: application to numerical simulation of microbial decomposition
IRD（法国发展研究院）；UMMISCO（复杂系统数学与信息建模单元）；Cadi Ayyad University（卡迪·阿亚德大学）；Faculty of Sciences Semlalia（塞姆拉利亚科学学院）；LIB（自由研究所）；UFR Sciences et Techniques（科学与技术培训与研究单位）；University of Burgundy（勃艮第大学）；INRA（法国国家农业研究院）
