Kernel-based clustering algorithm can identify and capture the non-linear structure in datasets, and thereby it can achieve better performance than linear clustering. However, computing and storing the entire kernel matrix occupy so large memory that it is difficult for kernel-based clustering to deal with large-scale datasets. In this paper, we employ incomplete Cholesky factorization to accelerate kernel clustering and save memory space. The key idea of the proposed kernel $k$-means clustering using incomplete Cholesky factorization is that we approximate the entire kernel matrix by the product of a low-rank matrix and its transposition. Then linear $k$-means clustering is applied to columns of the transpose of the low-rank matrix. We show both analytically and empirically that the performance of the proposed algorithm is similar to that of the kernel $k$-means clustering algorithm, but our method can deal with large-scale datasets.
Greville's method has been utilized in (Broad Learn-ing System) BLS to propose an effective and efficient incremental learning system without retraining the whole network from the beginning. For a column-partitioned matrix where the second part consists of p columns, Greville's method requires p iterations to compute the pseudoinverse of the whole matrix from the pseudoinverse of the first part. The incremental algorithms in BLS extend Greville's method to compute the pseudoinverse of the whole matrix from the pseudoinverse of the first part by just 1 iteration, which have neglected some possi…
The Chinese University of Hong Kong（香港中文大学）；Arizona State University（亚利桑那州立大学）
Recovering low-rank and sparse matrices from incomplete or corrupted observations is an important problem in machine learning, statistics, bioinformatics, computer vision, as well as signal and image processing. In theory, this problem can be solved by the natural convex joint/mixed relaxations (i.e., l_{1}-norm and trace norm) under certain conditions. However, all current provable algorithms suffer from superlinear per-iteration cost, which severely limits their applicability to large-scale problems. In this paper, we propose a scalable, provable structured low-rank matrix factorization meth…
Bayesian variable selection regression (BVSR) is able to jointly analyze genome-wide genetic datasets, but the slow computation via Markov chain Monte Carlo (MCMC) hampered its wide-spread usage. Here we present a novel iterative method to solve a special class of linear systems, which can increase the speed of the BVSR model-fitting tenfold. The iterative method hinges on the complex factorization of the sum of two matrices and the solution path resides in the complex domain (instead of the real domain). Compared to the Gauss-Seidel method, the complex factorization converges almost instantan…
Probabilistic approach to Boolean matrix factorization can provide solutions robustagainst noise and missing values with linear computational complexity. However,the assumption about latent factors can be problematic in real world applications.This study proposed a new probabilistic algorithm free of assumptions of latentfactors, while retaining the advantages of previous algorithms. Real data experimentshowed that our algorithm was favourably compared with current state-of-the-artprobabilistic algorithms.
Relaxed Sparsest-Permutation Formulation for Causal Discovery at Scale
Department of Statistics（统计学系）；Seoul National University（首尔国立大学）；Department of Statistics and Applied Probability（统计学与应用概率系）；University of California Santa Barbara（加州大学圣芭芭拉分校）；Scientific Data Division（科学数据部）；Lawrence Berkeley National Laboratory（伯克利国家实验室）；Interdisciplinary Program in Artificial Intelligence（人工智能跨学科项目）；Institute for Data Innovation in Science（科学数据创新研究所）
This paper proposes the recursive and square-root BLS algorithms to improve the original BLS for new added inputs, which utilize the inverse and inverse Cholesky factor of the Hermitian matrix in the ridge inverse, respectively, to update the ridge solution. The recursive BLS updates the inverse by the matrix inversion lemma, while the square-root BLS updates the upper-triangular inverse Cholesky factor by multiplying it with an upper-triangular intermediate matrix. When the added p training samples are more than the total k nodes in the network, i.e., p>k, the inverse of a sum of matrices is …
Matrix factorization techniques have been widely used as a method for collaborative filtering for recommender systems. In recent times, different variants of deep learning algorithms have been explored in this setting to improve the task of making a personalized recommendation with user-item interaction data. The idea that the mapping between the latent user or item factors and the original features is highly nonlinear suggest that classical matrix factorization techniques are no longer sufficient. In this paper, we propose a multilayer nonlinear semi-nonnegative matrix factorization method, w…
In this paper, we present a general, multistage framework for graphical model approximation using a cascade of models such as trees. In particular, we look at the problem of covariance matrix approximation for Gaussian distributions as linear transformations of tree models. This is a new way to decompose the covariance matrix. Here, we propose an algorithm which incorporates the Cholesky factorization method to compute the decomposition matrix and thus can approximate a simple graphical model using a cascade of the Cholesky factorization of the tree approximation transformations. The Cholesky …
CANDECOMP/PARAFAC (CP) tensor factorization of incomplete data is a powerful technique for tensor completion through explicitly capturing the multilinear latent factors. The existing CP algorithms require the tensor rank to be manually specified, however, the determination of tensor rank remains a challenging problem especially for CP rank. In addition, existing approaches do not take into account uncertainty information of latent factors, as well as missing entries. To address these issues, we formulate CP factorization using a hierarchical probabilistic model and employ a fully Bayesian trea…
College of Computer Science & Technology, Nanjing University of Aeronautics & Astronautics（南京航空航天大学计算机科学与技术学院）；Collaborative Innovation Center of Novel Software Technology and Industrialization（新型软件技术与产业化协同创新中心）
Real data are often with multiple modalities or from multiple heterogeneous sources, thus forming so-called multi-view data, which receives more and more attentions in machine learning. Multi-view clustering (MVC) becomes its important paradigm. In real-world applications, some views often suffer from instances missing. Clustering on such multi-view datasets is called incomplete multi-view clustering (IMC) and quite challenging. To date, though many approaches have been developed, most of them are offline and have high computational and memory costs especially for large scale datasets. To addr…
Harbin Institute of Technology, Shenzhen（哈尔滨工业大学（深圳））；The University of Queensland（昆士兰大学）
Clustering with incomplete views is a challenge in multi-view clustering. In this paper, we provide a novel and simple method to address this issue. Specifically, the proposed method simultaneously exploits the local information of each view and the complementary information among views to learn the common latent representation for all samples, which can greatly improve the compactness and discriminability of the obtained representation. Compared with the conventional graph embedding methods, the proposed method does not introduce any extra regularization term and corresponding penalty paramet…
FSRF: Factorization-guided Semantic Recovery for Incomplete Multimodal Sentiment Analysis
School of Future Science and Engineering, Soochow University（苏州大学未来科学与工程学院）；School of Advanced Manufacturing Engineering, Hefei University（合肥大学先进制造工程学院）；College of Global Talents, BITZH, Beijing Institute of Technology（北京理工大学珠海学院全球人才学院）；Academy for Engineering and Technology, Fudan University（复旦大学工程与技术学院）
Information Technologies Institute, CERTH（希腊国家研究和技术基金会信息技术研究所）
In this paper, using a novel matrix factorization and simultaneous reduction to diagonal form approach (or in short simultaneous reduction approach), Accelerated Kernel Discriminant Analysis (AKDA) and Accelerated Kernel Subclass Discriminant Analysis (AKSDA) are proposed. Specifically, instead of performing the simultaneous reduction of the between- and within-class or subclass scatter matrices, the nonzero eigenpairs (NZEP) of the so-called core matrix, which is of relatively small dimensionality, and the Cholesky factorization of the kernel matrix are computed, achieving more than one order…
We propose a generative model for robust tensor factorization in the presence of both missing data and outliers. The objective is to explicitly infer the underlying low-CP-rank tensor capturing the global information and a sparse tensor capturing the local information (also considered as outliers), thus providing the robust predictive distribution over missing entries. The low-CP-rank tensor is modeled by multilinear interactions between multiple latent factors on which the column sparsity is enforced by a hierarchical prior, while the sparse tensor is modeled by a hierarchical view of Student…
The Boolean matrix factorization problem consists in approximating a matrix by the Boolean product of two smaller Boolean matrices. To obtain optimal solutions when the matrices to be factorized are small, we propose SAT and MaxSAT encoding; however, when the matrices to be factorized are large, we propose a heuristic based on the search for maximal biclique edge cover. We experimentally demonstrate that our approaches allow a better factorization than existing approaches while keeping reasonable computation times. Our methods also allow the handling of incomplete matrices with missing entries…
Unsupervised learning of the Dawid-Skene (D&S) model from noisy, incomplete and crowdsourced annotations has been a long-standing challenge, and is a critical step towards reliably labeling massive data. A recent work takes a coupled nonnegative matrix factorization (CNMF) perspective, and shows appealing features: It ensures the identifiability of the D\&S model and enjoys low sample complexity, as only the estimates of the co-occurrences of annotator labels are involved. However, the identifiability holds only when certain somewhat restrictive conditions are met in the context of crowdsourci…
