The Mixed-Membership Stochastic Blockmodel~(MMSB) is proposed as one of the state-of-the-art Bayesian relational methods suitable for learning the complex hidden structure underlying the network data. However, the current formulation of MMSB suffers from the following two issues: (1), the prior information~(e.g. entities' community structural information) can not be well embedded in the modelling; (2), community evolution can not be well described in the literature. Therefore, we propose a non-parametric fragmentation coagulation based Mixed Membership Stochastic Blockmodel (fcMMSB). Our model performs entity-based clustering to capture the community information for entities and linkage-based clustering to derive the group information for links simultaneously. Besides, the proposed model infers the network structure and models community evolution, manifested by appearances and disappearances of communities, using the discrete fragmentation coagulation process (DFCP). By integrating the community structure with the group compatibility matrix we derive a generalized version of MMSB. An efficient Gibbs sampling scheme with Polya Gamma (PG) approach is implemented for posterior inference. We validate our model on synthetic and real world data.
Observations consisting of measurements on relationships for pairs of objects arise in many settings, such as protein interaction and gene regulatory networks, collections of author-recipient email, and social networks. Analyzing such data with probabilisic models can be delicate because the simple exchangeability assumptions underlying many boilerplate models no longer hold. In this paper, we describe a latent variable model of such data called the mixed membership stochastic blockmodel. This model extends blockmodels for relational data to ones which capture mixed membership latent relationa…
A primary goal of social science research is to understand how latent group memberships predict the dynamic process of network evolution. In the modeling of international militarized conflicts, for instance, scholars hypothesize that membership in geopolitical coalitions shapes the decision to engage in conflict. Such theories explain the ways in which nodal and dyadic characteristics affect the evolution of conflict patterns over time via their effects on group memberships. To aid the empirical testing of these arguments, we develop a dynamic model of network data by combining a hidden Markov…
We face network data from various sources, such as protein interactions and online social networks. A critical problem is to model network interactions and identify latent groups of network nodes. This problem is challenging due to many reasons. For example, the network nodes are interdependent instead of independent of each other, and the data are known to be very noisy (e.g., missing edges). To address these challenges, we propose a new relational model for network data, Sparse Matrix-variate Gaussian process Blockmodel (SMGB). Our model generalizes popular bilinear generative models and cap…
Indian Institute of Technology, Kanpur（印度理工学院坎普尔分校）
The latent feature relational model (LFRM) is a generative model for graph-structured data to learn a binary vector representation for each node in the graph. The binary vector denotes the node's membership in one or more communities. At its core, the LFRM miller2009nonparametric is an overlapping stochastic blockmodel, which defines the link probability between any pair of nodes as a bilinear function of their community membership vectors. Moreover, using a nonparametric Bayesian prior (Indian Buffet Process) enables learning the number of communities automatically from the data. However, des…
Inference for the stochastic blockmodel is currently of burgeoning interest in the statistical community, as well as in various application domains as diverse as social networks, citation networks, brain connectivity networks (connectomics), etc. Recent theoretical developments have shown that spectral embedding of graphs yields tractable distributional results; in particular, a random dot product latent position graph formulation of the stochastic blockmodel informs a mixture of normal distributions for the adjacency spectral embedding. We employ this new theory to provide an empirical Bayes …
Directional and pairwise measurements are often used to model inter-relationships in a social network setting. The Mixed-Membership Stochastic Blockmodel (MMSB) was a seminal work in this area, and many of its capabilities were extended since then. In this paper, we propose the \emph{Dynamic Infinite Mixed-Membership stochastic blockModel (DIM3)}, a generalised framework that extends the existing work to a potentially infinite number of communities and mixture memberships for each of the network's nodes. This model is in a dynamic setting, where additional model parameters are introduced to re…
Graduate School of System Informatics, Kobe University（神户大学系统信息学研究科）
Many kinds of data can be represented as a network or graph. It is crucial to infer the latent structure underlying such a network and to predict unobserved links in the network. Mixed Membership Stochastic Blockmodel (MMSB) is a promising model for network data. Latent variables and unknown parameters in MMSB have been estimated through Bayesian inference with the entire network; however, it is important to estimate them online for evolving networks. In this paper, we first develop online inference methods for MMSB through sequential Monte Carlo methods, also known as particle filters. We the…
University of Southern California（南加州大学）；University of Montreal（蒙特利尔大学）；University of Amsterdam（阿姆斯特丹大学）
We propose a stochastic gradient Markov chain Monte Carlo (SG-MCMC) algorithm for scalable inference in mixed-membership stochastic blockmodels (MMSB). Our algorithm is based on the stochastic gradient Riemannian Langevin sampler and achieves both faster speed and higher accuracy at every iteration than the current state-of-the-art algorithm based on stochastic variational inference. In addition we develop an approximation that can handle models that entertain a very large number of communities. The experimental results show that SG-MCMC strictly dominates competing algorithms in all cases.
The \emph{Mixed-Membership Stochastic Blockmodel (MMSB)} is a popular framework for modeling social network relationships. It can fully exploit each individual node's participation (or membership) in a social structure. Despite its powerful representations, this model makes an assumption that the distributions of relational membership indicators between two nodes are independent. Under many social network settings, however, it is possible that certain known subgroups of people may have high or low correlations in terms of their membership categories towards each other, and such prior informati…
The mixed membership stochastic blockmodel (MMSB) is a popular framework for community detection and network generation. It learns a low-rank mixed membership representation for each node across communities by exploiting the underlying graph structure. MMSB assumes that the membership distributions of the nodes are independently drawn from a Dirichlet distribution, which limits its capability to model highly correlated graph structures that exist in real-world networks. In this paper, we present a flexible richly structured MMSB model, \textit{Struct-MMSB}, that uses a recently developed stati…
Many approaches have been proposed to discover clusters within networks. Community finding field encompasses approaches which try to discover clusters where nodes are tightly related within them but loosely related with nodes of other clusters. However, a community network configuration is not the only possible latent structure in a graph. Core-periphery and hierarchical network configurations are valid structures to discover in a relational dataset. On the other hand, a network is not completely explained by only knowing the membership of each node. A high level view of the inter-cluster rela…
Stochastic blockmodels (SBM) and their variants, $e.g.$, mixed-membership and overlapping stochastic blockmodels, are latent variable based generative models for graphs. They have proven to be successful for various tasks, such as discovering the community structure and link prediction on graph-structured data. Recently, graph neural networks, $e.g.$, graph convolutional networks, have also emerged as a promising approach to learn powerful representations (embeddings) for the nodes in the graph, by exploiting graph properties such as locality and invariance. In this work, we unify these two di…
In a dynamic social or biological environment, the interactions between the actors can undergo large and systematic changes. In this paper we propose a model-based approach to analyze what we will refer to as the dynamic tomography of such time-evolving networks. Our approach offers an intuitive but powerful tool to infer the semantic underpinnings of each actor, such as its social roles or biological functions, underlying the observed network topologies. Our model builds on earlier work on a mixed membership stochastic blockmodel for static networks, and the state-space model for tracking obj…
We present a method to estimate block membership of nodes in a random graph generated by a stochastic blockmodel. We use an embedding procedure motivated by the random dot product graph model, a particular example of the latent position model. The embedding associates each node with a vector; these vectors are clustered via minimization of a square error criterion. We prove that this method is consistent for assigning nodes to blocks, as only a negligible number of nodes will be mis-assigned. We prove consistency of the method for directed and undirected graphs. The consistent block assignment…
Random-walk based network embedding algorithms like DeepWalk and node2vec are widely used to obtain Euclidean representation of the nodes in a network prior to performing downstream inference tasks. However, despite their impressive empirical performance, there is a lack of theoretical results explaining their large-sample behavior. In this paper, we study node2vec and DeepWalk through the perspective of matrix factorization. In particular, we analyze these algorithms in the setting of community detection for stochastic blockmodel graphs (and their degree-corrected variants). By exploiting the…
In this paper we address the problem of modeling relational data, which appear in many applications such as social network analysis, recommender systems and bioinformatics. Previous studies either consider latent feature based models but disregarding local structure in the network, or focus exclusively on capturing local structure of objects based on latent blockmodels without coupling with latent characteristics of objects. To combine the benefits of the previous work, we propose a novel model that can simultaneously incorporate the effect of latent features and covariates if any, as well as …
The problem of finding overlapping communities in networks has gained much attention recently. Optimization-based approaches use non-negative matrix factorization (NMF) or variants, but the global optimum cannot be provably attained in general. Model-based approaches, such as the popular mixed-membership stochastic blockmodel or MMSB (Airoldi et al., 2008), use parameters for each node to specify the overlapping communities, but standard inference techniques cannot guarantee consistency. We link the two approaches, by (a) establishing sufficient conditions for the symmetric NMF optimization to…
Many networks are complex dynamical systems, where both attributes of nodes and topology of the network (link structure) can change with time. We propose a model of co-evolving networks where both node at- tributes and network structure evolve under mutual influence. Specifically, we consider a mixed membership stochastic blockmodel, where the probability of observing a link between two nodes depends on their current membership vectors, while those membership vectors themselves evolve in the presence of a link between the nodes. Thus, the network is shaped by the interaction of stochastic proc…
We consider the problem of estimating community memberships of nodes in a network, where every node is associated with a vector determining its degree of membership in each community. Existing provably consistent algorithms often require strong assumptions about the population, are computationally expensive, and only provide an overall error bound for the whole community membership matrix. This paper provides uniform rates of convergence for the inferred community membership vector of each node in a network generated from the Mixed Membership Stochastic Blockmodel (MMSB); to our knowledge, thi…
When searching for gene pathways leading to specific disease outcomes, additional information on gene characteristics is often available that may facilitate to differentiate genes related to the disease from irrelevant background when connections involving both types of genes are observed and their relationships to the disease are unknown. We propose method to single out irrelevant background genes with the help of auxiliary information through a logistic regression, and cluster relevant genes into cohesive groups using the adjacency matrix. Expectation-maximization algorithm is modified to ma…
