PF: A C++ Library for Fast Particle Filtering

Fast fully-reproducible serial/parallel Monte Carlo and MCMC simulations and visualizations via ParaMonte::Python library

ParaMonte::Python (standing for Parallel Monte Carlo in Python) is a serial and MPI-parallelized library of (Markov Chain) Monte Carlo (MCMC) routines for sampling mathematical objective functions, in particular, the posterior distributions of parameters in Bayesian modeling and analysis in data science, Machine Learning, and scientific inference in general. In addition to providing access to fast high-performance serial/parallel Monte Carlo and MCMC sampling routines, the ParaMonte::Python library provides extensive post-processing and visualization tools that aim to automate and streamline t…

PPF - A Parallel Particle Filtering Library

We present the parallel particle filtering (PPF) software library, which enables hybrid shared-memory/distributed-memory parallelization of particle filtering (PF) algorithms combining the Message Passing Interface (MPI) with multithreading for multi-level parallelism. The library is implemented in Java and relies on OpenMPI's Java bindings for inter-process communication. It includes dynamic load balancing, multi-thread balancing, and several algorithmic improvements for PF, such as input-space domain decomposition. The PPF library hides the difficulties of efficient parallel programming of P…

Eigenvector spatial filtering for large data sets: fixed and random effects approaches

Eigenvector spatial filtering (ESF) is a spatial modeling approach, which has been applied in urban and regional studies, ecological studies, and so on. However, it is computationally demanding, and may not be suitable for large data modeling. The objective of this study is developing fast ESF and random effects ESF (RE-ESF), which are capable of handling very large samples. To achieve it, we accelerate eigen-decomposition and parameter estimation, which make ESF and RE-ESF slow. The former is accelerated by utilizing the Nystrom extension, whereas the latter is by small matrix tricks. The res…

FastAD: Expression Template-Based C++ Library for Fast and Memory-Efficient Automatic Differentiation

Automatic differentiation is a set of techniques to efficiently and accurately compute the derivative of a function represented by a computer program. Existing C++ libraries for automatic differentiation (e.g. Adept, Stan Math Library), however, exhibit large memory consumptions and runtime performance issues. This paper introduces FastAD, a new C++ template library for automatic differentiation, that overcomes all of these challenges in existing libraries by using vectorization, simpler memory management using a fully expression-template-based design, and other compile-time optimizations to r…

abess：一个Python和R中的快速最佳子集选择库

abess: A Fast Best Subset Selection Library in Python and R

本文介绍abess库，用统一框架高效求解线性回归、分类和PCA等最佳子集选择问题，速度可达现有工具20倍，并提供Python和R接口。