We develop new flexible univariate models for light-tailed and heavy-tailed data, which extend a hierarchical representation of the generalized Pareto (GP) limit for threshold exceedances. These models can accommodate departure from asymptotic threshold stability in finite samples while keeping the asymptotic GP distribution as a special (or boundary) case and can capture the tails and the bulk jointly without losing much flexibility. Spatial dependence is modeled through a latent process, while the data are assumed to be conditionally independent. Focusing on a gamma-gamma model construction, we design penalized complexity priors for crucial model parameters, shrinking our proposed spatial Bayesian hierarchical model toward a simpler reference whose marginal distributions are GP with moderately heavy tails. Our model can be fitted in fairly high dimensions using Markov chain Monte Carlo by exploiting the Metropolis-adjusted Langevin algorithm (MALA), which guarantees fast convergence of Markov chains with efficient block proposals for the latent variables. We also develop an adaptive scheme to calibrate the MALA tuning parameters. Moreover, our model avoids the expensive numerical evaluations of multifold integrals in censored likelihood expressions. We demonstrate our new methodology by simulation and application to a dataset of extreme rainfall events that occurred in Germany. Our fitted gamma-gamma model provides a satisfactory performance and can be successfully used to predict rainfall extremes at unobserved locations.
The statistical modeling of space-time extremes in environmental applications is key to understanding complex dependence structures in original event data and to generating realistic scenarios for impact models. In this context of high-dimensional data, we propose a novel hierarchical model for high threshold exceedances defined over continuous space and time by embedding a space-time Gamma process convolution for the rate of an exponential variable, leading to asymptotic independence in space and time. Its physically motivated anisotropic dependence structure is based on geometric objects mov…
This paper provides a mixture modeling framework using the bivariate generalized exponential distribution. We study different properties of this mixture distribution. Hierarchical EM algorithm is developed for finding the estimates of the parameters. The algorithm takes very large sample size to work as it contains many stages of approximation. Numerical Results are provided for more illustration.
In regression tasks the distribution of the data is often too complex to be fitted by a single model. In contrast, partition-based models are developed where data is divided and fitted by local models. These models partition the input space and do not leverage the input-output dependency of multimodal-distributed data, and strong local models are needed to make good predictions. Addressing these problems, we propose a binary tree-structured hierarchical routing mixture of experts (HRME) model that has classifiers as non-leaf node experts and simple regression models as leaf node experts. The c…
Indian Institute Of Science（印度科学学院）；IBM Research Labs（IBM研究实验室）
Dirichlet Process(DP) is a Bayesian non-parametric prior for infinite mixture modeling, where the number of mixture components grows with the number of data items. The Hierarchical Dirichlet Process (HDP), is an extension of DP for grouped data, often used for non-parametric topic modeling, where each group is a mixture over shared mixture densities. The Nested Dirichlet Process (nDP), on the other hand, is an extension of the DP for learning group level distributions from data, simultaneously clustering the groups. It allows group level distributions to be shared across groups in a non-parame…
In this work, we develop a constructive modeling framework for extreme threshold exceedances in repeated observations of spatial fields, based on general product mixtures of random fields possessing light or heavy-tailed margins and various spatial dependence characteristics, which are suitably designed to provide high flexibility in the tail and at sub-asymptotic levels. Our proposed model is akin to a recently proposed Gamma-Gamma model using a ratio of processes with Gamma marginal distributions, but it possesses a higher degree of flexibility in its joint tail structure, capturing strong d…
Gaussian scale mixtures are constructed as Gaussian processes with a random variance. They have non-Gaussian marginals and can exhibit asymptotic dependence unlike Gaussian processes, which are asymptotically independent except in the case of perfect dependence. In this paper, we study in detail the extremal dependence properties of Gaussian scale mixtures and we unify and extend general results on their joint tail decay rates in both asymptotic dependence and independence cases. Motivated by the analysis of spatial extremes, we propose several flexible yet parsimonious parametric copula model…
We develop a connection between mixture and envelope representations of objective functions that arise frequently in statistics. We refer to this connection using the term "hierarchical duality." Our results suggest an interesting and previously under-exploited relationship between marginalization and profiling, or equivalently between the Fenchel--Moreau theorem for convex functions and the Bernstein--Widder theorem for Laplace transforms. We give several different sets of conditions under which such a duality result obtains. We then extend existing work on envelope representations in several…
Employing nonparametric methods for density estimation has become routine in Bayesian statistical practice. Models based on discrete nonparametric priors such as Dirichlet Process Mixture (DPM) models are very attractive choices due to their flexibility and tractability. However, a common problem in fitting DPMs or other discrete models to data is that they tend to produce a large number of (sometimes) redundant clusters. In this work we propose a method that produces parsimonious mixture models (i.e. mixtures that discourage the creation of redundant clusters), without sacrificing flexibility…
National statistical agencies are regularly required to produce estimates about various subpopulations, formed by demographic and/or geographic classifications, based on a limited number of samples. Traditional direct estimates computed using only sampled data from individual subpopulations are usually unreliable due to small sample sizes. Subpopulations with small samples are termed small areas or small domains. To improve on the less reliable direct estimates, model-based estimates, which borrow information from suitable auxiliary variables, have been extensively proposed in the literature. …
A Bayesian multivariate extreme value mixture model
School of Mathematics and Statistics, University of Glasgow（格拉斯哥大学数学与统计学院）；School of Mathematics and Statistics, University of St Andrews（圣安德鲁斯大学数学与统计学院）
A hidden truncation hyperbolic (HTH) distribution is introduced and finite mixtures thereof are applied for clustering. A stochastic representation of the HTH distribution is given and a density is derived. A hierarchical representation is described, which aids in parameter estimation. Finite mixtures of HTH distributions are presented and their identifiability is proved. The convexity of the HTH distribution is discussed, which is important in clustering applications, and some theoretical results in this direction are presented. The relationship between the HTH distribution and other skewed d…
Environmental health studies are increasingly measuring multiple pollutants to characterize the joint health effects attributable to exposure mixtures. However, the underlying dose-response relationship between toxicants and health outcomes of interest may be highly nonlinear, with possible nonlinear interaction effects. Existing penalized regression methods that account for exposure interactions either cannot accommodate nonlinear interactions while maintaining strong heredity or are computationally unstable in applications with limited sample size. In this paper, we propose a general shrinka…
Flexible spatial models that allow transitions between tail dependence classes have recently appeared in the literature. However, inference for these models is computationally prohibitive, even in moderate dimensions, due to the necessity of repeatedly evaluating the multivariate Gaussian distribution function. In this work, we attempt to achieve truly high-dimensional inference for extremes of spatial processes, while retaining the desirable flexibility in the tail dependence structure, by modifying an established class of models based on scale mixtures Gaussian processes. We show that the de…
University of Potsdam（波茨坦大学）；École Nationale de la Statistique et de l’administration économique（国家统计与经济管理学院）；CNRS（法国国家科学研究中心）；Université Paris-Dauphine（巴黎九大）；PSL Research University（巴黎文理研究大学）
We present a case-study demonstrating the usefulness of Bayesian hierarchical mixture modelling for investigating cognitive processes. In sentence comprehension, it is widely assumed that the distance between linguistic co-dependents affects the latency of dependency resolution: the longer the distance, the longer the retrieval time (the distance-based account). An alternative theory, direct-access, assumes that retrieval times are a mixture of two distributions: one distribution represents successful retrievals (these are independent of dependency distance) and the other represents an initial…
The use of a finite mixture of normal distributions in model-based clustering allows to capture non-Gaussian data clusters. However, identifying the clusters from the normal components is challenging and in general either achieved by imposing constraints on the model or by using post-processing procedures. Within the Bayesian framework we propose a different approach based on sparse finite mixtures to achieve identifiability. We specify a hierarchical prior where the hyperparameters are carefully selected such that they are reflective of the cluster structure aimed at. In addition this prior a…
Mixture modeling, which considers the potential heterogeneity in data, is widely adopted for classification and clustering problems. Mixture models can be estimated using the Expectation-Maximization algorithm, which works with the complete estimating equations conditioned by the latent membership variables of the cluster assignment based on the hierarchical expression of mixture models. However, when the mixture components have light tails such as a normal distribution, the mixture model can be sensitive to outliers. This study proposes a method of weighted complete estimating equations (WCE)…
We propose a two-component mixture of a noninformative (diffuse) and an informative prior distribution, weighted through the data in such a way to prefer the first component if a prior-data conflict arises. The data-driven approach for computing the mixture weights makes this class data-dependent. Although rarely used with any theoretical motivation, data-dependent priors are often used for different reasons, and their use has been a lot debated over the last decades. However, our approach is justified in terms of Bayesian inference as an approximation of a hierarchical model and as a conditio…
Estimating the causal effect of an exposure on an outcome is an important task in many economical and biological studies. Mendelian randomization, in particular, uses genetic variants as instruments to estimate causal effects in epidemiological studies. However, conventional instrumental variable methods rely on some untestable assumptions, which may be violated in real problems. In this paper, we adopt a Bayesian framework and build hierarchical models to incorporate invalid effects of instruments. We introduce an empirical Bayes estimator for which some of the instruments are invalid by util…
In the framework of Bayesian model-based clustering based on a finite mixture of Gaussian distributions, we present a joint approach to estimate the number of mixture components and identify cluster-relevant variables simultaneously as well as to obtain an identified model. Our approach consists in specifying sparse hierarchical priors on the mixture weights and component means. In a deliberately overfitting mixture model the sparse prior on the weights empties superfluous components during MCMC. A straightforward estimator for the true number of components is given by the most frequent number…
A Bayesian hierarchical mixture cure modelling framework to utilize multiple survival datasets for long-term survivorship estimates: A case study from previously untreated metastatic melanoma
UCL（伦敦大学学院）；Bristol Myers Squibb（百时美施贵宝）；The Royal Marsden Hospital（皇家马斯登医院）
Background: The nucleus of eukaryotic cells spatially packages chromosomes into a hierarchical and distinct segregation that plays critical roles in maintaining transcription regulation. High-throughput methods of chromosome conformation capture, such as Hi-C, have revealed topologically associating domains (TADs) that are defined by biased chromatin interactions within them. Results: Here, we introduce a novel method, HiCKey, to decipher hierarchical TAD structures in Hi-C data and compare them across samples. We first derive a generalized likelihood-ratio (GLR) test for detecting change-poin…
Columbia University（哥伦比亚大学）；University of Ljubljana（卢布尔雅那大学）；Aalto University（阿尔托大学）
Stacking is a widely used model averaging technique that asymptotically yields optimal predictions among linear averages. We show that stacking is most effective when model predictive performance is heterogeneous in inputs, and we can further improve the stacked mixture with a hierarchical model. We generalize stacking to Bayesian hierarchical stacking. The model weights are varying as a function of data, partially-pooled, and inferred using Bayesian inference. We further incorporate discrete and continuous inputs, other structured priors, and time series and longitudinal data. To verify the p…
