A persistent homology approach to heart rate variability analysis with an application to sleep-wake classification
University of North Carolina at Greensboro（北卡罗来纳大学格林斯伯勒分校）；National Taiwan Normal University（台湾师范大学）；Chang Gung Memorial Hospital（长庚纪念医院）；Chang Gung University（长庚大学）；Duke University（杜克大学）；National Center for Theoretical Sciences（国家理论科学研究中心）
Persistent homology (PH) is a recently developed theory in the field of algebraic topology to study shapes of datasets. It is an effective data analysis tool that is robust to noise and has been widely applied. We demonstrate a general pipeline to apply PH to study time series; particularly the instantaneous heart rate time series for the heart rate variability (HRV) analysis. The first step is capturing the shapes of time series from two different aspects -- {the PH's and hence persistence diagrams of its} sub-level set and Taken's lag map. Second, we propose a systematic {and computationally efficient} approach to summarize persistence diagrams, which we coined {\em persistence statistics}. To demonstrate our proposed method, we apply these tools to the HRV analysis and the sleep-wake, REM-NREM (rapid eyeball movement and non rapid eyeball movement) and sleep-REM-NREM classification problems. The proposed algorithm is evaluated on three different datasets via the cross-database validation scheme. The performance of our approach is better than the state-of-the-art algorithms, and the result is consistent throughout different datasets.
Sleep state classification is vital in managing and understanding sleep patterns and is generally the first step in identifying acute or chronic sleep disorders. However, it is essential to do this without affecting the natural environment or conditions of the subject during their sleep. Techniques such as Polysomnography(PSG) are obtrusive and are not convenient for regular sleep monitoring. Fortunately, The rise of novel technologies and advanced computing has given a recent resurgence to monitoring sleep techniques. One such contactless and unobtrusive monitoring technique is Ballistocradio…
A Single Channel-Based Neonatal Sleep-Wake Classification using Hjorth Parameters and Improved Gradient Boosting
Department of Computer Science, Loyola University（洛约拉大学计算机科学系）；Department of Computer Science, University of People（人民大学计算机科学系）；Department of Electronic, Electrical and Systems Engineering, University of Birmingham（伯明翰大学电子、电气与系统工程系）；School of Computing, Engineering and the Built Environment, Edinburgh Napier University（爱丁堡纳皮尔大学计算、工程与环境科学学院）；RIOTU Lab, Prince Sultan University（普森大学RIOTU实验室）
The regulation of the autonomic nervous system changes with the sleep stages causing variations in the physiological variables. We exploit these changes with the aim of classifying the sleep stages in awake or asleep using pulse oximeter signals. We applied a recurrent neural network to heart rate and peripheral oxygen saturation signals to classify the sleep stage every 30 seconds. The network architecture consists of two stacked layers of bidirectional gated recurrent units (GRUs) and a softmax layer to classify the output. In this paper, we used 5000 patients from the Sleep Heart Health Stu…
Good quality sleep is essential for good health and sleep monitoring becomes a vital research topic. This paper provides a low cost, continuous and contactless WiFi-based vital signs (breathing and heart rate) monitoring method. In particular, we set up the antennas based on Fresnel diffraction model and signal propagation theory, which enhances the detection of weak breathing/heartbeat motion. We implement a prototype system using the off-shelf devices and a real-time processing system to monitor vital signs in real time. The experimental results indicate the accurate breathing rate and heart…
Sleep-wake cycle detection is a key step when extrapolating sleep patterns from actigraphy data. Numerous supervised detection algorithms have been developed with parameters estimated from and optimized for a particular dataset, yet their generalizability from sensor to sensor or study to study is unknown. In this paper, we propose and validate an unsupervised algorithm -- CircaCP -- to detect sleep-wake cycles from minute-by-minute actigraphy data. It first uses a robust cosinor model to estimate circadian rhythm, then searches for a single change point (CP) within each cycle. We used CircaCP…
The most common reason for students' tardiness is due to waking up late every morning. The causes may vary from lack of rest and sleep, to failure of ascertaining an alarm clock's noise or sometimes, falling back to sleep again after snoozing an alarm. This paper's purpose is to address the problem concerning student's inability to continue to stay awake after turning off their alarms using Arduino-based pulse rate triggered alarm interrupt (APRTAI). The proposed system will enable students to make use of a higher pulse rate from their thumb to turn off an alarm which can be achieved by engagi…
University of Massachusetts Amherst（马萨诸塞大学阿默斯特分校）；Singapore Management University（新加坡管理大学）
Sleep deprivation is a public health concern that significantly impacts one's well-being and performance. Sleep is an intimate experience, and state-of-the-art sleep monitoring solutions are highly-personalized to individual users. With a motivation to expand sleep monitoring capabilities at a large scale and contribute sleep data to public health understanding, we present Wisleep, a system for inferring sleep duration using smartphone network connections that are passively sensed from WiFi infrastructure. We propose an unsupervised ensemble model of Bayesian change point detection, validating…
A practical way of detecting sleep stages has become more necessary as we begin to learn about the vast effects that sleep has on people's lives. The current methods of sleep stage detection are expensive, invasive to a person's sleep, and not practical in a modern home setting. While the method of detecting sleep stages via the monitoring of brain activity, muscle activity, and eye movement, through electroencephalogram in a lab setting, provide the gold standard for detection, this paper aims to investigate a new method that will allow a person to gain similar insight and results with no obt…
Classification of Infant Sleep/Wake States: Cross-Attention among Large Scale Pretrained Transformer Networks using Audio, ECG, and IMU Data
University of Illinois at Urbana Champaign（伊利诺伊大学厄巴纳-香槟分校）；Beckman Institute for Advanced Science and Technology（贝克曼高级科学技术研究院）；Worcester Polytechnic Institute（伍斯特理工学院）
In this paper, we first present a single-input, multiple-output convolutional neural network that can estimate both heart rate and respiration rate simultaneously by exploiting the underlying link between heart rate and respiration rate. The inputs to the neural network are the amplitude and phase of channel state information collected by a pair of WiFi devices. Our WiFi-based technique addresses privacy concerns and is adaptable to a variety of settings. This system overall accuracy for the heart and respiration rate estimation can reach 99.109% and 98.581%, respectively. Furthermore, we deve…
Deep Learning-based Automated Diagnosis of Obstructive Sleep Apnea and Sleep Stage Classification in Children Using Millimeter-wave Radar and Pulse Oximeter
Osaka University（大阪大学）；Nara Institute of Science and Technology（奈良先端科学技术大学院大学）；Fudan University（复旦大学）；Waseda University（早稻田大学）
This paper proposes a novel framework for automatically capturing the time-frequency nature of electroencephalogram (EEG) signals of human sleep based on the authoritative sleep medicine guidance. The framework consists of two parts: the first part extracts informative features by partitioning the input EEG spectrograms into a sequence of time-frequency patches. The second part is constituted by an attention-based architecture to efficiently search for the correlation between partitioned time-frequency patches and defining factors of sleep stages in parallel. The proposed pipeline is validated…
SleepPPG-Net2: Deep learning generalization for sleep staging from photoplethysmography
The Faculty of Data and Decision Sciences, Technion, Israel Institute of Technology（以色列理工学院数据与决策科学学院）；Faculty of Biomedical Engineering, Technion, Israel Institute of Technology（以色列理工学院生物医学工程学院）
This paper proposes a deep learning (DL) model for automatic sleep stage classification based on single-channel EEG data. The DL model features a convolutional neural network (CNN) and transformers. The model was designed to run on energy and memory-constrained devices for real-time operation with local processing. The Fpz-Cz EEG signals from a publicly available Sleep-EDF dataset are used to train and test the model. Four convolutional filter layers were used to extract features and reduce the data dimension. Then, transformers were utilized to learn the time-variant features of the data. To …
Obstructive sleep Apnea (OSA) is a form of sleep disordered breathing characterized by frequent episodes of upper airway collapse during sleep. Pediatric OSA occurs in 1-5% of children and can related to other serious health conditions such as high blood pressure, behavioral issues, or altered growth. OSA is often diagnosed by studying the patient's sleep cycle, the pattern with which they progress through various sleep states such as wakefulness, rapid eye-movement, and non-rapid eye-movement. The sleep state data is obtained using an overnight polysomnography test that the patient undergoes …
Charles Sturt University（查尔斯特大学）；Asia Pacific International College（亚太国际学院）；Worcester State University（伍斯特州立大学）；University of Kurdistan Hewler（库尔德斯坦埃尔比勒大学）
Background and Aim: Each stage of sleep can affect human health, and not getting enough sleep at any stage may lead to sleep disorder like parasomnia, apnea, insomnia, etc. Sleep-related diseases could be diagnosed using Convolutional Neural Network Classifier. However, this classifier has not been successfully implemented into sleep stage classification systems due to high complexity and low accuracy of classification. The aim of this research is to increase the accuracy and reduce the learning time of Convolutional Neural Network Classifier. Methodology: The proposed system used a modified O…
In this paper, we propose a Siamese sleep transformer (SST) that effectively extracts features from single-channel raw electroencephalogram signals for robust sleep stage scoring. Despite the significant advances in sleep stage scoring in the last few years, most of them mainly focused on the increment of model performance. However, other problems still exist: the bias of labels in datasets and the instability of model performance by repetitive training. To alleviate these problems, we propose the SST, a novel sleep stage scoring model with a selective batch sampling strategy and self-knowledg…
Staging by the Book: Automatic Sleep Stage Classification Using Scoring Rules
Department of Computer Science, Reykjavik University（雷克雅未克大学计算机科学系）；Reykjavik University Sleep Institute（雷克雅未克大学睡眠研究所）；Reykjavik University（雷克雅未克大学）；Department of Engineering, Reykjavik University（雷克雅未克大学工程系）；School of Mathematical Sciences, University of Southampton（萨塞克斯大学数学科学学院）
Heart rate (HR) detection from ballistocardiogram (BCG) signals is challenging because the signal morphology can vary between and within-subjects. Also, it differs from one sensor to another. Hence, it is essential to evaluate HR detection algorithms across several datasets and under different experimental setups. In this paper, we studied the potential of three HR detection algorithms across four independent BCG datasets. The three algorithms are as follows: the multiresolution analysis of the maximal overlap discrete wavelet transform (MODWT-MRA), continuous wavelet transform (CWT), and temp…
