Tractable yet expressive density estimators are a key building block of probabilistic machine learning. While sum-product networks (SPNs) offer attractive inference capabilities, obtaining structures large enough to fit complex, high-dimensional data has proven challenging. In this paper, we present random sum-product forests (RSPFs), an ensemble approach for mixing multiple randomly generated SPNs. We also introduce residual links, which reference specialized substructures of other component SPNs in order to leverage the context-specific knowledge encoded within them. Our empirical evidence demonstrates that RSPFs provide better performance than their individual components. Adding residual links improves the models further, allowing the resulting ResSPNs to be competitive with commonly used structure learning methods.
This paper presents a novel ensemble learning approach called Residual Likelihood Forests (RLF). Our weak learners produce conditional likelihoods that are sequentially optimized using global loss in the context of previous learners within a boosting-like framework (rather than probability distributions that are measured from observed data) and are combined multiplicatively (rather than additively). This increases the efficiency of our strong classifier, allowing for the design of classifiers which are more compact in terms of model capacity. We apply our method to several machine learning cla…
Sparse residual tree (SRT) is an adaptive exploration method for multivariate scattered data approximation. It leads to sparse and stable approximations in areas where the data is sufficient or redundant, and points out the possible local regions where data refinement is needed. Sparse residual forest (SRF) is a combination of SRT predictors to further improve the approximation accuracy and stability according to the error characteristics of SRTs. The hierarchical parallel SRT algorithm is based on both tree decomposition and adaptive radial basis function (RBF) explorations, whereby for each …
In this paper we propose using the principle of boosting to reduce the bias of a random forest prediction in the regression setting. From the original random forest fit we extract the residuals and then fit another random forest to these residuals. We call the sum of these two random forests a \textit{one-step boosted forest}. We show with simulated and real data that the one-step boosted forest has a reduced bias compared to the original random forest. The paper also provides a variance estimate of the one-step boosted forest by an extension of the infinitesimal Jackknife estimator. Using thi…
Feature Space Selection and Heterogeneous Effect Estimation for Blood-Brain Barrier Permeability: A Random Forest to the Generalized Random Forest Pipeline
University of Pretoria（比勒陀利亚大学）；Ferdowsi University of Mashhad（马什哈德菲尔多西大学）
Istanbul Technical University（伊斯坦布尔技术大学）；University of Maryland Baltimore County（马里兰大学巴尔的摩县分校）；Istanbul Medeniyet University（伊斯坦布尔梅德尼耶特大学）
Graph autoencoders are efficient at embedding graph-based data sets. Most graph autoencoder architectures have shallow depths which limits their ability to capture meaningful relations between nodes separated by multi-hops. In this paper, we propose Residual Variational Graph Autoencoder, ResVGAE, a deep variational graph autoencoder model with multiple residual modules. We show that our multiple residual modules, a convolutional layer with residual connection, improve the average precision of the graph autoencoders. Experimental results suggest that our proposed model with residual modules ou…
An important issue when using Machine Learning algorithms in recent research is the lack of interpretability. Although these algorithms provide accurate point predictions for various learning problems, uncertainty estimates connected with point predictions are rather sparse. A contribution to this gap for the Random Forest Regression Learner is presented here. Based on its Out-of-Bag procedure, several parametric and non-parametric prediction intervals are provided for Random Forest point predictions and theoretical guarantees for its correct coverage probability is delivered. In a second part…
Variable selection in sparse regression models is an important task as applications ranging from biomedical research to econometrics have shown. Especially for higher dimensional regression problems, for which the link function between response and covariates cannot be directly detected, the selection of informative variables is challenging. Under these circumstances, the Random Forest method is a helpful tool to predict new outcomes while delivering measures for variable selection. One common approach is the usage of the permutation importance. Due to its intuitive idea and flexible usage, it…
School of Electrical and Electronic Engineering Nanyang Technological University（南洋理工大学电气与电子工程学院）
Both neural networks and decision trees are popular machine learning methods and are widely used to solve problems from diverse domains. These two classifiers are commonly used base classifiers in an ensemble framework. In this paper, we first present a new variant of oblique decision tree based on a linear classifier, then construct an ensemble classifier based on the fusion of a fast neural network, random vector functional link network and oblique decision trees. Random Vector Functional Link Network has an elegant closed form solution with extremely short training time. The neural network …
Random forests have been widely used for their ability to provide so-called importance measures, which give insight at a global (per dataset) level on the relevance of input variables to predict a certain output. On the other hand, methods based on Shapley values have been introduced to refine the analysis of feature relevance in tree-based models to a local (per instance) level. In this context, we first show that the global Mean Decrease of Impurity (MDI) variable importance scores correspond to Shapley values under some conditions. Then, we derive a local MDI importance measure of variable …
Random forests are a very effective and commonly used statistical method, but their full theoretical analysis is still an open problem. As a first step, simplified models such as purely random forests have been introduced, in order to shed light on the good performance of random forests. In this paper, we study the approximation error (the bias) of some purely random forest models in a regression framework, focusing in particular on the influence of the number of trees in the forest. Under some regularity assumptions on the regression function, we show that the bias of an infinite forest decre…
A fully nonparametric approach for making probabilistic predictions in multi-response regression problems is introduced. Random forests are used as marginal models for each response variable and, as novel contribution of the present work, the dependence between the multiple response variables is modeled by a generative neural network. This combined modeling approach of random forests, corresponding empirical marginal residual distributions and a generative neural network is referred to as RafterNet. Multiple datasets serve as examples to demonstrate the flexibility of the approach and its impa…
Breiman's random forest (RF) can be interpreted as an implicit kernel generator,where the ensuing proximity matrix represents the data-driven RF kernel. Kernel perspective on the RF has been used to develop a principled framework for theoretical investigation of its statistical properties. However, practical utility of the links between kernels and the RF has not been widely explored and systematically evaluated.Focus of our work is investigation of the interplay between kernel methods and the RF. We elucidate the performance and properties of the data driven RF kernels used by regularized lin…
Residual networks (ResNets) have displayed impressive results in pattern recognition and, recently, have garnered considerable theoretical interest due to a perceived link with neural ordinary differential equations (neural ODEs). This link relies on the convergence of network weights to a smooth function as the number of layers increases. We investigate the properties of weights trained by stochastic gradient descent and their scaling with network depth through detailed numerical experiments. We observe the existence of scaling regimes markedly different from those assumed in neural ODE liter…
Indian Institute of Technology Indore（印度理工学院印多尔分校）
Chimera state refers to coexistence of coherent and non-coherent phases in identically coupled dynamical units found in various complex dynamical systems. Identification of Chimera, on one hand is essential due to its applicability in various areas including neuroscience, and on other hand is challenging due to its widely varied appearance in different systems and the peculiar nature of its profile. Therefore, a simple yet universal method for its identification remains an open problem. Here, we present a very distinctive approach using machine learning techniques to characterize different dyn…
Machine learning is revolutionizing biology by facilitating the prediction of outcomes from complex patterns found in massive data sets. Large biological data sets, like those generated by transcriptome or microbiome studies,measure many relevant components that interact in vivo with one another in modular ways.Identifying the high-order interactions that machine learning models use to make predictions would facilitate the development of hypotheses linking combinations of measured components to outcome. By using the structure of random forests, a new algorithmic approach, termed JigSaw,was dev…
RNN-Based GNSS Positioning using Satellite Measurement Features and Pseudorange Residuals
CEA-Leti（法国原子能与替代能源委员会电子与信息技术实验室）；Université Grenoble Alpes（格勒诺布尔阿尔卑斯大学）；CY Cergy Paris Université（CY塞尔吉巴黎大学）；ENSEA（国立高等电子及应用学院）；CNRS（法国国家科学研究中心）；New York University (NYU)（纽约大学）；NYU Tandon School of Engineering（纽约大学坦登工程学院）；Univ. Gustave Eiffel（古斯塔夫·埃菲尔大学）
Two decades of U.S. government legislative outcomes, as well as the policy preferences of rich people, the general population, and diverse interest groups, were captured in a detailed dataset curated and analyzed by Gilens, Page et al. (2014). They found that the preferences of the rich correlated strongly with policy outcomes, while the preferences of the general population did not, except via a linkage with rich people's preferences. Their analysis applied the tools of classical statistical inference, in particular logistic regression. In this paper we analyze the Gilens dataset using the co…
