Mechanics of a Plant in Fluid Flow

Statistical mechanics of transport processes in active fluids: Equations of hydrodynamics

The equations of hydrodynamics including mass, linear momentum, angular momentum, and energy are derived by coarse-graining the microscopic equations of motion for systems consisting of rotary dumbbells driven by internal torques.

Statistical mechanics of homogeneous partly pinned fluid systems

The homogeneous partly pinned fluid systems are simple models of a fluid confined in a disordered porous matrix obtained by arresting randomly chosen particles in a one-component bulk fluid or one of the two components of a binary mixture. In this paper, their configurational properties are investigated. It is shown that a peculiar complementarity exists between the mobile and immobile phases, which originates from the fact that the solid is prepared in presence of and in equilibrium with the adsorbed fluid. Simple identities follow, which connect different types of configurational averages, e…

An Infinitesimal Quantum Group Underlies Classical Fluid Mechanics

Arnold showed that the Euler equations of an ideal fluid describe geodesics in the Lie algebra of incompressible vector fields. We will show that helicity induces a splitting of the Lie algebra into two isotropic subspaces, forming a Manin triple. Viewed another way, this shows that there is an infinitesimal quantum group (a.k.a. Lie bi-algebra) underlying classical fluid mechanics.

Statistical Mechanics of liquids and fluids in curved space

In this article, we review the progress made on the statistical mechanics of liquids and fluids embedded in curved space. Our main focus will be on two-dimensional manifolds of constant nonzero curvature and on the influence of the latter on the phase behavior, thermodynamics and structure of simple liquids. Reference will also be made to existing work on three-dimensional curved space and two-dimensional manifolds with varying curvature.

Continuum model of the simple dielectric fluid: Consistency between density based and continuum mechanics methods

The basic continuum model for polar fluids is deceptively simple. The free energy integral consists of four terms: The coupling of polarization to an external field, the electrostatic energy of the induced electric field interacting with itself and the stored polarization energy quadratic in the polarization. A local function of density accounts for the mechanical state of the fluid. Viewed as a non-equilibrium free energy functional of number density and polarization, minimization in these two densities under constraints of the Maxwell field equations should lead the correct equilibrium state…

Mechanics of Tunable Helices and Geometric Frustration in Biomimetic Seashells

Helical structures are ubiquitous in nature and engineering, ranging from DNA molecules to plant tendrils, from sea snail shells to nanoribbons. While the helical shapes in natural and engineered systems often exhibit nearly uniform radius and pitch, helical shell structures with changing radius and pitch, such as seashells and some plant tendrils, adds to the variety of this family of aesthetic beauty. Here we develop a comprehensive theoretical framework for tunable helical morphologies, and report the first biomimetic seashell-like structure resulting from mechanics of geometric frustration…

具有隐藏自由度的流体的统计力学

Statistical mechanics of fluids with hidden degrees of freedom

针对传统粗粒化模型无法捕捉复杂流体固有微观自由度的问题，本研究提出纳入不同微观自由度及其相互作用的模型，通过两个假设证明系统可呈现具有限尺度非均匀密度分布的平衡态，凸显了区分复杂系统平衡态与非平衡稳态的重要性。

Stochastic Eulerian Lagrangian Methods for Fluid-Structure Interactions with Thermal Fluctuations

We present approaches for the study of fluid-structure interactions subject to thermal fluctuations. A mixed mechanical description is utilized combining Eulerian and Lagrangian reference frames. We establish general conditions for operators coupling these descriptions. Stochastic driving fields for the formalism are derived using principles from statistical mechanics. The stochastic differential equations of the formalism are found to exhibit significant stiffness in some physical regimes. To cope with this issue, we derive reduced stochastic differential equations for several physical regime…

Cytoplasmic Streaming in Plant Cells Emerges Naturally by Microfilament Self-Organization

Many cells exhibit large-scale active circulation of their entire fluid contents, a process termed cytoplasmic streaming. This phenomenon is particularly prevalent in plant cells, often presenting strikingly regimented flow patterns. The driving mechanism in such cells is known: myosin-coated organelles entrain cytoplasm as they process along actin filament bundles fixed at the periphery. Still unknown, however, is the developmental process which constructs the well-ordered actin configurations required for coherent cell-scale flow. Previous experimental works on streaming regeneration in cell…

Dynamical density functional theory for molecular and colloidal fluids: a microscopic approach to fluid mechanics

In recent years, a number of dynamical density functional theories (DDFTs) have been developed for describing the dynamics of the one-body density of both colloidal and atomic fluids. In the colloidal case, the particles are assumed to have stochastic equations of motion and theories exist for both the case when the particle motion is over-damped and also in the regime where inertial effects are relevant. In this paper we extend the theory and explore the connections between the microscopic DDFT and the equations of motion from continuum fluid mechanics. In particular, starting from the Kramer…

Nonequilibrium Statistical Mechanics and Hydrodynamics for a Granular Fluid

Granular fluids consist of collections of activated mesoscopic or macroscopic particles (e.g., powders or grains) whose flows often appear similar to those of normal fluids. To explore the qualitative and quantitative description of these flows an idealized model for such fluids, a system of smooth inelastic hard spheres, is considered. The single feature distinguishing granular and normal fluids being explored in this way is the inelasticity of collisions. The dominant differences observed in real granular fluids are indeed captured by this feature. Following a brief introductory description …