Inspired by the success of Convolutional Neural Networks (CNN), we develop a novel Computer Aided Detection (CADe) system using CNN for Glioblastoma Multiforme (GBM) detection and segmentation from multi channel MRI data. A two-stage approach first identifies the presence of GBM. This is followed by a GBM localization in each "abnormal" MR slice. As part of the CADe system, two CNN architectures viz. Classification CNN (C-CNN) and Detection CNN (D-CNN) are employed. The CADe system considers MRI data consisting of four sequences ($T_1$, $T_{1c},$ $T_2$, and $T_{2FLAIR}$) as input, and automatically generates the bounding boxes encompassing the tumor regions in each slice which is deemed abnormal. Experimental results demonstrate that the proposed CADe system, when used as a preliminary step before segmentation, can allow improved delineation of tumor region while reducing false positives arising in normal areas of the brain. The GrowCut method, employed for tumor segmentation, typically requires a foreground and background seed region for initialization. Here the algorithm is initialized with seeds automatically generated from the output of the proposed CADe system, thereby resulting in improved performance as compared to that using random seeds.
Enhancement Without Contrast: Stability-Aware Multicenter Machine Learning for Glioma MRI Imaging
Tehran University of Medical Science(德黑兰医科大学);Guilan University of Medical Sciences(吉兰医科大学);University of Tehran(德黑兰大学);Motamed Cancer Institute, ACECR(莫塔梅德癌症研究所,学术中心教育文化研究委员会);University of British Columbia(不列颠哥伦比亚大学);Technological Virtual Collaboration Company (TECVICO CORP.)(技术虚拟协作公司);BC Cancer Research Institute(不列颠哥伦比亚省癌症研究所)
Adaptive PromptNet For Auxiliary Glioma Diagnosis without Contrast-Enhanced MRI
Zhengzhou University(郑州大学);Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences(中国科学院深圳先进技术研究院);Peng Cheng Laboratory(鹏城实验室);Guangdong Provincial People’s Hospital(广东省人民医院);Guangdong Academy of Medical Sciences(广东省医学科学院)
Treatment-aware Diffusion Probabilistic Model for Longitudinal MRI Generation and Diffuse Glioma Growth Prediction
Oslo University Hospital(奥斯陆大学医院);Universitat Politècnica de València(瓦伦西亚理工大学);Instituto Universitario de Tecnologías de la Información y Comunicaciones(信息技术与通信大学学院)
Glioma Multimodal MRI Analysis System for Tumor Layered Diagnosis via Multi-task Semi-supervised Learning
Cancer Research Institute, Central South University(中南大学肿瘤研究所);School of Physics & Electronic Science, Changsha University of Science & Technology(长沙理工大学物理与电子科学学院);IFLYTEK Research(iFlytek研究院);School of Life Sciences, Central South University(中南大学生命科学学院);Department of Radiology, Xiangya Hospital, Central South University(中南大学湘雅医院放射科);School of Computer Science and Engineering, Central South University(中南大学计算机科学与工程学院);Department of Neurosurgery, Xiangya Hospital, Central South University(中南大学湘雅医院神经外科)
Revolutionizing Glioma Segmentation & Grading Using 3D MRI - Guided Hybrid Deep Learning Models
Department of Computer Science and Engineering, School of Computer Science and Engineering(计算机科学与工程系,计算机科学与工程学院);Vellore Institute of Technology, Chennai, India(维洛雷技术学院,钦奈,印度);School of Advanced Science, Vellore Institute of Technology, Chennai, India(先进科学学院,维洛雷技术学院,钦奈,印度);Centre for Human Movement Analytics, Vellore Institute of Technology, Chennai, India(人类运动分析中心,维洛雷技术学院,钦奈,印度)
MRI-based classification of IDH mutation and 1p/19q codeletion status of gliomas using a 2.5D hybrid multi-task convolutional neural network
Washington University in St. Louis(圣路易斯华盛顿大学);Mallinckrodt Institute of Radiology(马林克罗特放射研究所);Washington University School of Medicine(华盛顿大学医学院);Institute for Informatics(信息学研究所)
异柠檬酸脱氢酶(IDH)突变和1 p/19 q共缺失状态是胶质瘤的重要预后标志。目前,它们是使用侵入性程序确定的。我们的目标是开发基于人工智能的方法来非侵入性地确定MRI中的这些分子改变。为此,2648例胶质瘤患者的术前MRI扫描(II-IV级)从华盛顿大学医学院收集(WUSM; n = 835)和公开可用的数据集,即脑肿瘤分割(BraTS; n = 378),LGG 1 p/19 q(n = 159),Ivy胶质母细胞瘤Atlas项目(Ivy GAP; n = 41)、癌症基因组图谱(TCGA; n = 461)和伊拉斯谟神经胶质瘤数据库(EGD; n = 774)。提出了一种2.5D混合卷积神经网络,通过利用来自MR扫描的成像特征和来自临床记录和肿瘤位置的先验知识特征,同时定位肿瘤并对其分子状态进行分类。模型在一个内部(TCGA)和两个外部(WUSM和EGD)测试集上进行了测试。对于IDH,表现最好的模型在内部、WUSM和EGD测试集上分别实现了0.925、0.874、0.933的受试者操作特征下的面积(AUROC)和0.899、0.702、0.853的精确-召回曲线下的面积(AUPRC)。对于1 p/19 q,最佳模型在这三个数据分割上分别实现了0.782,0.754,0.842的AUROC和0.588,0.713,0.782的AUPRC。该模型对未知数据的高准确性展示了其泛…
Targeted Neural Architectures in Multi-Objective Frameworks for Complete Glioma Characterization from Multimodal MRI
School of Computer Science and Engineering, Vellore Institute of Technology(韦洛尔理工学院计算机科学与工程学院);College of Engineering, Guindy, Anna University(安娜大学金迪工程学院);Institute of Neurosurgery, Madras Medical College(马德拉斯医学院神经外科研究所)
MRI Tumor Segmentation with Densely Connected 3D CNN
Department of Computer Science, University of Rochester(罗切斯特大学计算机科学系);Department of Electrical Engineering, University of Rochester(罗切斯特大学电气工程系);Department of Biomedical Engineering, University of Rochester(罗切斯特大学生物医学工程系);Department of Imaging Sciences, University of Rochester(罗切斯特大学影像科学系);Faculty of Medicine and Institute of Clinical Radiology, Ludwig Maximilian University(路德维希-马克西米利安大学医学院及临床放射学研究所)
Resource-Efficient Glioma Segmentation on Sub-Saharan MRI
BAC School of Computing;Information Systems, Botswana Faculty of Medicine of Sfax, University of Sfax, Sfax, Tunisia Laboratory of Biophysics;Medical Technologies, Higher Institute of Medical Technologies of Tunis, University ElManar, Tunis, Tunisia London School of Hygiene;Tropical Medicine, London, UK Lawson Health Research Institute, London, Ontario, Canada Department of Radiology, Bayero University, Kano-Nigeria Department of Radiology, Aminu Kano Teaching Hospital, Kano-Nigeria Department of Anatomy, Federal University Lokoja college of health sciences, Kogi State, Nigeria Department of Computer Science;Information, College of Science, Majmaah University, AL-Majmaah, 11952, Saudi Arabia CES Laboratory, National School of Engineers of Sfax, Sfax, Tunisia Department of Computer Science;IT, Mulungushi University, Zambia Multimodal Imaging of Neurodegenerative Diseases (MiND) Lab, Department of Neurology;Neurosurgery, McGill University, Montreal, QC, Canada Department of Electrical;Computer Engineering, University of British Columbia, Vancouver, Canada Medical Artificial Intelligence Laboratory (MAI Lab), Lagos, Nigeria Montreal Neurological Institute, McGill University, Montréal, Canada Department of Medicine, University of Cape Town, South Africa Department of Clinical \& Radiation Oncology, University of Cape Town, South Africa
Training Beyond Convergence: Grokking nnU-Net for Glioma Segmentation in Sub-Saharan MRI
Multimedia University(多媒体大学);University of British Columbia(不列颠哥伦比亚大学);McGill University(麦吉尔大学);Montreal Neurological Institute(蒙特利尔神经学研究所);Federal University of Technology Minna(明纳联邦理工大学);Medical Artificial Intelligence Laboratory(医学人工智能实验室);Friedrich-Alexander-Universität(弗里德里希-亚历山大大学)
A Comparison and Evaluation of Fine-tuned Convolutional Neural Networks to Large Language Models for Image Classification and Segmentation of Brain Tumors on MRI
Quantifying U-Net Uncertainty in Multi-Parametric MRI-based Glioma Segmentation by Spherical Image Projection
Duke University(杜克大学);Duke Kunshan University(昆山杜克大学);The University of Texas MD Anderson Cancer Center(德克萨斯大学MD安德森癌症中心);The University of Texas MD Anderson Graduate School of Biomedical Science(德克萨斯大学MD安德森生物医学研究生院)
Post-hoc Overall Survival Time Prediction from Brain MRI
Australian Institute for Machine Learning, The University of Adelaide(阿德莱德大学澳大利亚机器学习研究所);Institute for Systems and Robotics, Instituto Superior Tecnico(高等理工学院系统与机器人研究所)
The Brain Tumor Sequence Registration (BraTS-Reg) Challenge: Establishing Correspondence Between Pre-Operative and Follow-up MRI Scans of Diffuse Glioma Patients
Division of Computational Pathology, Department of Pathology and Laboratory Medicine, Indiana University School of Medicine(印第安纳大学医学院计算病理学系);Department of Electrical and Systems Engineering, Washington University in St. Louis(圣路易斯华盛顿大学电气与系统工程系);GE HealthCare(GE医疗);Center for Artificial Intelligence and Data Science for Integrated Diagnostics (AI2D) and Center for Biomedical Image Computing and Analytics (CBICA), University of Penn(宾夕法尼亚大学综合诊断人工智能与数据科学中心及生物医学图像计算与分析中心)
The Segment Anything foundation model achieves favorable brain tumor autosegmentation accuracy on MRI to support radiotherapy treatment planning
Universitätsklinikum Erlangen(埃尔兰根大学医院);Friedrich-Alexander-Universität Erlangen-Nürnberg(埃尔朗根-纽伦堡弗里德里希·亚历山大大学);Comprehensive Cancer Center Erlangen-EMN (CCC ER-EMN)(埃尔兰根-欧洲分子神经科学网络综合癌症中心)
GMENet: Generative Mixture of Experts Network for Multi-Center Glioma Diagnosis with Incomplete Imaging Sequences
School of Biomedical Engineering and Technology Innovation, Fudan University(复旦大学生物医学工程与技术创新学院);Institute of Science and Technology for Brain-Inspired Intelligence, Fudan University(复旦大学脑启发智能科学技术研究院);Intelligent Diagnosis and Treatment Laboratory for Brain Diseases, Joint Laboratory of Neurosurgery Department of Huashan Hospital and School of Information Science and Technology, Fudan University(脑病智能诊断与治疗实验室,华山医院神经外科部门联合实验室,复旦大学信息科学学院)
The Brain Tumor Segmentation (BraTS) Challenge 2023: Glioma Segmentation in Sub-Saharan Africa Patient Population (BraTS-Africa)
Medical Artificial Intelligence Laboratory (MAI Lab)(医学人工智能实验室(MAI实验室));Department of Radiation Biology, Radiotherapy and Radiodiagnosis, University of Lagos(拉各斯大学放射生物学、放射治疗与放射诊断系);Department of Radiology, University of California, San Diego(加州大学圣地亚哥分校放射科);Crestview Radiology Limited(Crestview放射科有限公司);Lagos University Teaching Hospital(拉各斯大学教学医院);Lagos State University Teaching Hospital, Ikeja, Lagos, Nigeria(拉各斯州大学教学医院,伊凯贾,拉各斯,尼日利亚);NSIA-Kano Diagnostic Center, Kano Nigeria(NSIA-卡诺诊断中心,卡诺,尼日利亚);Nnamdi Azikiwe University Teaching Hospital, Nnewi, Anambra State, Nigeria(恩内迪·阿齐基韦大学教学医院,恩韦伊,安纳博拉州,尼日利亚);Federal Medical Centre, Abeokuta, Ogun State, Nigeria(阿博库塔联邦医疗中心,奥贡州,尼日利亚);Federal Medical Centre, Umahia, Abia State, Nigeria(乌马希亚联邦医疗中心,阿比亚州,尼日利亚);National Hospital Abuja, FCT, Nigeria(阿布贾国家医院,联邦首都区,尼日利亚);Benue State University Teaching Hospital, Markurdi, Benue State, Nigeria(贝努埃州大学教学医院,马库尔迪,贝努埃州,尼日利亚);Duke University Medical Center, Department of Radiology, USA(达特茅斯大学医学中心,放射科,美国);University of California San Francisco, CA, USA(加州大学旧金山分校,CA,美国);Yale University, New Haven, CT, USA(耶鲁大学,新 Haven,CT,美国);Children's National Hospital, Washington DC, USA(儿童医院华盛顿特区,华盛顿特区,美国);George Washington University, Washington DC, USA(乔治·华盛顿大学,华盛顿特区,美国);Sage Bionetworks, USA(Sage生物网络,美国);Department of Neuroradiology, Technical University of Munich, Munich, Germany(慕尼黑技术大学神经放射科系,慕尼黑,德国);Helmholtz Research Center, Munich, Germany(海德堡研究中心,慕尼黑,德国);Duke University Medical Center, Department of Radiation Oncology, USA(达特茅斯大学医学中心,放射肿瘤科,美国);Children’s Hospital of Philadelphia, University of Pennsylvania, Philadelphia, PA, USA(费城儿童医院,宾夕法尼亚大学,费城,PA,美国);Center for AI and Data Science for Integrated Diagnostics (AI2D) & Center for Biomedical Image Computing and Analytics (CBICA), University of Pennsylvania, Philadelphia, PA, USA(人工智能与数据科学整合诊断中心(AI2D)及生物医学影像计算与分析中心(CBICA),宾夕法尼亚大学,费城,PA,美国);Athinoula A Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Boston, MA, USA(Athinoula A Martinos生物医学影像中心,马萨诸塞总医院,波士顿,MA,美国);University of Zurich, Switzerland(苏黎世大学,瑞士);Cancer Imaging Program, National Cancer Institute, National Institutes of Health, Bethesda, MD 20814, USA(癌症成像计划,国家癌症研究所,国家卫生研究院,贝塞斯达,MD 20814,美国);Center for Clinical Epidemiology and Biostatistics, University of Pennsylvania, Philadelphia, USA(临床流行病学与生物统计学中心,宾夕法尼亚大学,费城,美国);Department of Applied Mathematics and Computer Science, Technical University of Denmark, Denmark(应用数学与计算机科学系,丹麦技术大学,丹麦);Mayo Clinic, MN, USA(梅奥诊所,MN,美国);Precision FDA, U.S. Food and Drug Administration, Silver Spring, MD, USA(Precision FDA,美国食品药品监督管理局,Silver Spring,MD,美国);Booz Allen Hamilton, McLean, VA, USA(Booz Allen Hamilton,麦肯,VA,美国);Department of Radiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA(放射科,佩尔曼医学院,宾夕法尼亚大学,费城,PA,美国);Department of Pathology and Laboratory Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA(病理学与实验室医学系,佩尔曼医学院,宾夕法尼亚大学,费城,PA,美国);Center for Global Health, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA(全球健康中心,佩尔曼医学院,宾夕法尼亚大学,费城,宾夕法尼亚,美国);Montreal Neurological Institute, McGill University, Montreal, Canada(蒙特利尔神经科学研究所,麦吉尔大学,蒙特利尔,加拿大);Department of Medicine, University of Cape Town, South Africa(医学系,开普敦大学,南非);Department of Radiation Medicine, University of Cape Town, South Africa(放射医学系,开普敦大学,南非)
Towards Trustworthy AI for Glioma Diagnosis: A Task-Aware Evaluation of Uncertainty Quantification
Erasmus MC, University Medical Center Rotterdam(鹿特丹大学医学中心伊拉斯谟MC);Amsterdam UMC, University of Amsterdam(阿姆斯特丹大学医学中心阿姆斯特丹UMC);GE HealthCare(GE医疗);Erasmus MC Cancer Institute(伊拉斯谟MC癌症研究所);Medical Delta(医疗三角洲)
Adult Glioma Segmentation in Sub-Saharan Africa using Transfer Learning on Stratified Finetuning Data
Sheikh Zayed Institute for Pediatric Surgical Innovation(谢赫·扎耶德儿科外科创新研究所);Children’s National Hospital(儿童国家医院);Biomedical Image Technologies(生物医学影像技术中心);Universidad Politécnica de Madrid(马德里理工大学);CIBER-BBN(西班牙生物医学网络研究中心);ISCIII(卡洛斯三世卫生研究所);School of Medicine and Health Sciences, George Washington University(乔治·华盛顿大学医学与健康科学学院)
AA-ViT: Anatomically Aware Vision Transformer with Structural and Frequency Guidance for Contrast Enhanced Brain MRI Synthesis
Atlantic Technological University(大西洋理工大学);Belfast Health and Social Care Trust(贝尔法斯特健康和社会关怀信托基金);King’s College Hospital NHS Foundation Trust(国王学院医院国民保健服务信托基金);King’s College London(伦敦国王学院);Queen’s University Belfast(贝尔法斯特女王大学)
Deep learning-based group-wise registration for longitudinal MRI analysis in glioma
Erasmus MC(伊拉斯姆斯大学医学中心);Medical Delta(医疗三角洲);Delft University of Technology(代尔夫特理工大学);Amsterdam UMC / VU Medical Center(阿姆斯特丹大学医学中心/自由大学医学中心);Princess Máxima Center for Pediatric Oncology(马克西玛公主儿童肿瘤中心);The Jackson Laboratory for Genomic Medicine(杰克逊基因组医学实验室)