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arXiv 1806.06970cs.CV

Deconvolving convolution neural network for cell detection

The Institute of Cancer Research(癌症研究所);University College London Cancer Institute(伦敦大学学院癌症研究所);University of Leicester(莱斯特大学);University of Cambridge(剑桥大学);The Francis Crick Institute(弗朗西斯·克里克研究所);University College London Hospitals NHS Foundation Trust(伦敦大学学院医院NHS基金会信托)

Shan E Ahmed Raza, Khalid AbdulJabbar, Mariam Jamal-Hanjani, Selvaraju Veeriah, John Le Quesne, Charles Swanton, Yinyin Yuan

英文摘要:

Automatic cell detection in histology images is a challenging task due to varying size, shape and features of cells and stain variations across a large cohort. Conventional deep learning methods regress the probability of each pixel belonging to the centre of a cell followed by detection of local maxima. We present deconvolution as an alternate approach to local maxima detection. The ground truth points are convolved with a mapping filter to generate artifical labels. A convolutional neural network (CNN) is modified to convolve it's output with the same mapping filter and is trained for the mapped labels. Output of the trained CNN is then deconvolved to generate points as cell detection. We compare our method with state-of-the-art deep learning approaches where the results show that the proposed approach detects cells with comparatively high precision and F1-score.

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