Normative modeling has recently been proposed as an alternative for the case-control approach in modeling heterogeneity within clinical cohorts. Normative modeling is based on single-output Gaussian process regression that provides coherent estimates of uncertainty required by the method but does not consider spatial covariance structure. Here, we introduce a scalable multi-task Gaussian process regression (S-MTGPR) approach to address this problem. To this end, we exploit a combination of a low-rank approximation of the spatial covariance matrix with algebraic properties of Kronecker product in order to reduce the computational complexity of Gaussian process regression in high-dimensional output spaces. On a public fMRI dataset, we show that S-MTGPR: 1) leads to substantial computational improvements that allow us to estimate normative models for high-dimensional fMRI data whilst accounting for spatial structure in data; 2) by modeling both spatial and across-sample variances, it provides higher sensitivity in novelty detection scenarios.
Hierarchical Bayesian Regression for Multi-Site Normative Modeling of Neuroimaging Data
Radboud University(拉德堡德大学);Radboud University Medical Centre(拉德堡德大学医学中心);University of Oslo(奥斯陆大学);Oslo University Hospital(奥斯陆大学医院);King’s College London(伦敦国王学院)
Improving Normative Modeling for Multi-modal Neuroimaging Data using mixture-of-product-of-experts variational autoencoders
Department of Computer Science and Engineering, Washington University in St. Louis, USA(计算机科学与工程系,华盛顿大学圣路易斯分校);Institute for Informatics, Data Science and Biostatistics, Washington University in St.Louis, USA(信息学、数据科学与生物统计研究所,华盛顿大学圣路易斯分校);Department of Radiology, Washington University in St.Louis, USA(放射学系,华盛顿大学圣路易斯分校)
Fusing multimodal neuroimaging data with a variational autoencoder
Tri-institutional Center for Translational Research in Neuroimaging and Data Science (TReNDS), Georgia State, Georgia Tech, Emory(三机构神经影像与数据科学转化研究中心(TReNDS),佐治亚州立大学、佐治亚理工学院、埃默里大学);Faculty of Electrical Engineering, Mathematics & Computer Science, TU Delft(代尔夫特理工大学电气工程、数学与计算机科学学院);Lambert High School(兰伯特高中)
Denoising diffusion networks for normative modeling in neuroimaging
Australian Institute for Machine Learning (AIML), Adelaide University(澳大利亚机器学习研究所(AIML),阿德莱德大学);South Australian Health and Medical Research Institute (SAHMRI)(南澳大利亚健康与医学研究机构(SAHMRI));School of Computer Science and Information Technology, Adelaide University(计算机科学与信息技术学院,阿德莱德大学);School of Public Health, Adelaide University(公共卫生学院,阿德莱德大学)
Scalable Simulation-Based Model Inference with Test-Time Complexity Control
Machine Learning in Science, University of Tübingen;Tübingen AI Center, Tübingen, Germany;Max Planck Institute for Intelligent Systems, Department Empirical Inference, Tübingen, Germany;Sir Peter Mansfield Imaging Centre, School of Medicine, University of Nottingham, UK;National Institute for Health Research (NIHR) Nottingham Biomedical Research Centre, Queens Medical Centre, Nottingham, United Kingdom
AdapDISCOM: An Adaptive Sparse Regression Method for High-Dimensional Multimodal Data With Block-Wise Missingness and Measurement Errors
Institut national de la recherche scientifique (INRS)(国家科学研究研究所);Université du Québec à Chicoutimi (UQAC)(魁北克大学希库蒂米分校);McGill University(麦吉尔大学);The Neuro (Montreal Neurological Institute-Hospital)(蒙特利尔神经学研究所/医院);Douglas Hospital Research Centre(道格拉斯医院研究中心)