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arXiv 1504.07784physics.chem-phcond-mat.stat-mechphysics.comp-ph
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类巨正则自适应分辨技术中的路径积分分子动力学:液态水的模拟

Path Integral Molecular Dynamics within the Grand Canonical-like Adaptive Resolution Technique: Simulation of Liquid Water

Animesh Agarwal, Luigi Delle Site

摘要:

利用路径积分技术,在分子模拟中研究了轻原子空间离域的量子效应。在众多的方法中,路径积分(PI)和分子动力学(MD)是目前研究原子空间离域性的有力工具,然而这种技术在计算上是非常苛刻的。上述限制意味着PIMD应用的限制相对较小的系统和较短的时间尺度。一个可能的解决方案,以克服大小和时间的限制是引入PIMD算法的自适应分辨率仿真计划(AdResS)。AdResS需要在路径积分水平上处理一个相对较小的区域,并将其嵌入由通用球形粗粒分子组成的大分子库中。以前已经表明,在简单的水平上实现上述想法,对于玩具系统或简单/测试系统(如液态仲氢)产生了合理的结果。鼓励以前的结果,在本文中,我们展示了模拟液态水在室内条件下,AdResS,在其最新的和更准确的大典范样版本(GC-AdResS),合并与两个最相关的PIMD技术在文献中。我们的结果与文献中报道的和/或与从全PIMD模拟获得的结果的比较显示出非常令人满意的协议。

英文摘要:

Quantum effects due to the spatial delocalization of light atoms are treated in molecular simulation via the path integral technique. Among several methods, Path Integral (PI) Molecular Dynamics (MD) is nowadays a powerful tool to investigate properties induced by spatial delocalization of atoms; however computationally this technique is very demanding. The abovementioned limitation implies the restriction of PIMD applications to relatively small systems and short time scales. One possible solution to overcome size and time limitation is to introduce PIMD algorithms into the Adaptive Resolution Simulation Scheme (AdResS). AdResS requires a relatively small region treated at path integral level and embeds it into a large molecular reservoir consisting of generic spherical coarse grained molecules. It was previously shown that the realization of the idea above, at a simple level, produced reasonable results for toy systems or simple/test systems like liquid parahydrogen. Encouraged by previous results, in this paper we show the simulation of liquid water at room conditions where AdResS, in its latest and more accurate Grand-Canonical-like version (GC-AdResS), is merged with two of the most relevant PIMD techniques available in literature. The comparison of our results with those reported in literature and/or with those obtained from full PIMD simulations shows a highly satisfactory agreement.

机构、总结、中文摘要均由AI分析而来,可能存在错误,请以论文正文为准。

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