We investigate numerically the role of spatial arrangement of the patches on the irreversible adsorption of patchy colloids on a substrate. We consider spherical three-patch colloids and study the dependence of the kinetics on the opening angle between patches. We show that growth is suppressed below and above minimum and maximum opening angles, revealing two absorbing phase transitions between thick and thin film regimes. While the transition at the minimum angle is continuous, in the Directed Percolation class, that at the maximum angle is clearly discontinuous. For intermediate values of the opening angle, a rough colloidal network in the Kardar-Parisi-Zhang universality class grows indefinitely. The nature of the transitions was analyzed in detail by considering bond flexibility, defined as the dispersion of the angle between the bond and the center of the patch. For the range of flexibilities considered we always observe two phase transitions. However, the range of opening angles where growth is sustained increases with flexibility. At a tricritical flexibility, the discontinuous transition becomes continuous. The practical implications of our findings and the relation to other nonequilibrium transitions are discussed.
Particle-based simulations are performed to study the post-relaxation dynamics of functionalized (patchy) colloids adsorbed on an attractive substrate. Kinetically arrested structures that depend on the number of adsorbed particles and the strength of the particle-particle and particle-substrate interactions are identified. The radial distribution function is characterized by a sequence of peaks, with relative intensities that depend on the number of adsorbed particles. The first-layer coverage is a non-monotonic function of the number of particles, with an optimal value around one layer of ad…
An extended theoretical study of interface potentials in adsorbed colloid-polymer mixtures is performed. To describe the colloid-polymer mixture near a hard wall, a simple Cahn-Nakanishi-Fisher free-energy functional is used. The bulk phase behavior and the substrate-adsorbate interaction are modelled by the free-volume theory for ideal polymers with polymer-to-colloid size ratios q=0.6 and q=1. The interface potentials are constructed with help from a Fisher-Jin crossing constraint. By manipulating the crossing density, a complete interface potential can be obtained from natural, single-cross…
We determine the solvent mediated contribution to the effective potentials for model colloidal or nano- particles dispersed in a binary solvent that exhibits fluid-fluid phase separation. Using a simple density functional theory we calculate the density profiles of both solvent species in the presence of the `colloids', which are treated as external potentials, and determine the solvent mediated (SM) potentials. Specifically, we calculate SM potentials between (i) two colloids, (ii) a colloid and a planar fluid-fluid interface, and (iii) a colloid and a planar wall with an adsorbed wetting fil…
In this work we develop the first theory to model self assembling mixtures of single patch colloids and colloids with spherically symmetric attractions. In the development of the theory we restrict the interactions such that there are short ranged attractions between patchy and spherically symmetric colloids, but patchy colloids do not attract patchy colloids and spherically symmetric colloids do not attract spherically symmetric colloids. This results in the temperature, density and composition dependent reversible self assembly of the mixture into colloidal star molecules. This type of mixtu…
We study the irreversible adsorption of spherical $2AnB$ patchy colloids (with two $A$-patches on the poles and $n$ $B$-patches along the equator) on a substrate. In particular, we consider dissimilar $AA$, $AB$, and $BB$ binding probabilities. We characterize the patch-colloid network and its dependence on $n$ and on the binding probabilities. Two growth regimes are identified with different density profiles and we calculate a growth mode diagram as a function of the colloid parameters. We also find that, close to the substrate, the density of the network, which depends on the colloid paramet…
We generalize the inverse patchy colloid model that was originally developed for heterogeneously charged particles with two identical polar patches and an oppositely charged equator to a model that can have a considerably richer surface pattern. Based on a Debye-Hueckel framework, we propose a coarse-grained description of the effective pair interactions that is applicable to particles with an arbitrary patch decoration. We demonstrate the versatility of this approach by applying it to models with (i) two differently charged and/or sized patches, and (ii) three, possibly different patches.
I provide analytical or semi-analytical expressions for the small-angle scattering of colloidal objects that can be described as curved plates. These models could help characterize a variety of inorganic or biological systems.
We investigate numerically the irreversible aggregation of patchy spherical colloids on a flat substrate. We consider $n$-patch particles and characterize the dependence of the irreversible aggregation kinetics on $n$. For all values of $n$, considered in this study, the growing interface of the aggregate is in the Kardar-Parisi-Zhang universality class, although the bulk structure exhibits a rich dependence on $n$. In particular, the bulk density varies with $n$ and the network is more ordered for particles with fewer patches. Preferred orientations of the bonds are also observed for networks…
We report on the self-assembly of inverse patchy colloids (IPC) using Monte Carlo simulations in two-dimensions. The IPC model considered in this work corresponds to either bipolar colloids or colloids decorated with complementary DNA on their surfaces, where only patch and non-patch parts attract. The patch coverage is found to be a dominant factor in deciding equilibrium self-assembled structures. In particular, both regular square and triangular crystals are found to be stable at 0.5 patch coverage. Upon decreasing the patch coverage to 0.33, the regular square crystal is destablized; inste…
Inverse Patchy Colloids (IPCs) differ from conventional patchy particles because their patches repel (rather than attract) each other and attract (rather than repel) the part of the colloidal surface that is free of patches. These particular features occur, .e.g., in heterogeneously charged colloidal systems. Here we consider overall neutral IPCs carrying two, relatively small, polar patches. Previous studies of the same model under planar confinement have evidenced the formation of branched, disordered aggregates composed of ring-like structures. We investigate here the bulk behavior of the s…
The dynamics of active colloids is very sensitive to the presence of boundaries and interfaces which therefore can be used to control their motion. Here we analyze the dynamics of active colloids adsorbed at a fluid-fluid interface. By using a mesoscopic numerical approach which relies on an approximated numerical solution of the Navier-Stokes equation, we show that when adsorbed at a fluid interface, an active colloid experiences a net torque even in the absence of a viscosity contrast between the two adjacent fluids. In particular, we study the dependence of this torque on the contact angle …
We study the irreversible aggregation of films of patchy spherical colloids with directional and selective interactions. We report a crossover of the interfacial roughening from the Kardar-Parisi-Zhang (KPZ) to the KPZ with quenched disorder (KPZQ) universality class when the difference between the strong and weak bonds is sufficiently large. We calculate the critical exponents and identify the crossover between the two regimes.
In this work we extend Wertheim's thermodynamic perturbation theory (TPT) to binary mixtures (species A and species B) of patchy colloids where each species has a single patch which can bond a maximum of twice (divalent). Colloids are treated as hard spheres with a directional conical asssociation site. We restrict the system such that only patches between unlike species share attractions; meaning there are AB attractions but no AA or BB attractions. The theory is derived in Wertheim's two density formalism for one site associating fluids. Since the patches are doubly bondable, associated chai…
Colloids coated with single-stranded DNA (ssDNA) can bind selectively to other colloids coated with complementary ssDNA. The fact that DNA-coated colloids (DNACCs) can bind to specific partners opens the prospect of making colloidal `molecules'. However, in order to design DNACC-based molecules, we must be able to control the valency of the colloids, i.e. the number of partners to which a given DNACC can bind. One obvious, but not very simple approach is to decorate the colloidal surface with patches of single-stranded DNA that selectively bind those on other colloids. Here we propose a design…
Patchy particles are considered to be a good model for protein aggregation. We calculate the equilibrium phase diagram of two-patch colloidal particles undergoing aggregation along with isotropic potential. This investigation demonstrates the coexistence of different phases like disordered clusters, chains, crystals and bundles depending on the relative strength of isotropic and anisotropic potential, these phases are also reported for glucose isomerase proteins. We also show that the formation of network of bundles is metastable against the formation of thermodynamically favored finite sized …
We explore the behavior of two-dimensional patchy colloidal particles with 8 or 10 symmetrically arranged patches by employing Monte-Carlo simulations. The particles interact according to an isotropic pair potential that possesses only one typical length. The patches lead to additional attractions that are anisotropic and depend on the relative orientation of two neighboring particles. We investigate the assembled structures with a special interest in quasicrystals. We found that the patch width is of great importance: Only in case of narrow patch widths we are able to observe metastable octag…
We investigate the structural properties of a simple model for tetrahedral patchy colloids in which the patch width and the patch range can be tuned independently. For wide bond angles, a fully bonded network can be generated by standard Monte Carlo or molecular dynamics simulations of the model, providing a neat method for generating defect-free random tetrahedral networks. This offers the possibility of focusing on the role of the patch angular width on the structure of the fully bonded network. The analysis of the fully bonded configurations as a function of the bonding angle shows how the …
Inverse patchy colloids are nano- to micro-scale particles with a surface divided into differently charged regions. This class of colloids combines directional, selective bonding with a relatively simple particle design: owing to the competitive interplay between the orientation-dependent attraction and repulsion -- induced by the interactions between like/oppositely charged areas -- experimentally accessible surface patterns are complex enough to favor the stabilization of specific structures of interest. Most important, the behavior of heterogeneously charged units can be ideally controlled …
In this paper, we develop a thermodynamic perturbation theory to describe the self-assembly of patchy colloids which exhibit both patch-patch attractions as well as patch / non-patch attractions. That is, patches attract other patches as well as the no patch region. In general these attractions operate on different energy scales, which allows for controlled self-assembly as well as anomalous phase behavior. As an application we apply the model to the study of liquid water.
We report theoretical and numerical evaluations of the phase diagram for a model of patchy particles. Specifically we study hard-spheres whose surface is decorated by a small number f of identical sites ("sticky spots'') interacting via a short-range square-well attraction. We theoretically evaluate, solving the Wertheim theory, the location of the critical point and the gas-liquid coexistence line for several values of f and compare them to results of Gibbs and Grand Canonical Monte Carlo simulations. We study both ordered and disordered arrangements of the sites on the hard-sphere surface an…
Patchy colloidal model with three and four equivalent patches, confined in the attractive random porous media, undergo re-entrant gas-liquid phase separation with the possibility for the liquid phase density to approach zero. This unusual behavior is caused by an interplay between strong fluid-fluid bonding interactions and weak fluid-matrix attractions. At high temperature the shape of the phase diagram is determined by the attractive interaction between the fluid particles; weak Yukawa attraction between fluid and obstacles only slightly enhances the fluid-fluid bonding. At low enough temper…
In this paper we extend our previous theory [B. D. Marshall and W.G. Chapman, J. Chem. Phys. 139, 104904 (2013)] for mixtures of single patch colloids (p colloids) and colloids with spherically symmetric attractions (s colloids) to the case that the p colloids can have multiple patches. The theory is then applied to the case of a binary mixture of bi-functional p colloids which have an A and B type patch and s colloids which are not attracted to other s colloids and are attracted to only patch A on the p colloids. This mixture reversibly self assembles into both colloidal star molecules, where…
We developed a generalized replicated liquid theory for glassy phases of non-spherical uniaxial molecules and colloids, which becomes exact in the large dimensional limit $d\to\infty$. We then applied the scheme to patchy colloids with sticky patches at their heads and tails. The system exhibits rich phase behaviors involving the translational and orientational degrees of freedom. We found a novel glass-glass transition between glasses with large/small orientational fluctuations.
This article discusses recent attempts to provide a deeper understanding of the thermoreversible "gel" state of colloidal matter and to unravel the analogies between gels at the colloidal level and gels at the molecular level, commonly known as network-forming strong liquids. The connection between gel-forming patchy colloids and strong liquids is provided by the limited valence of the inter-particle interactions, i.e. by the presence of a limit in the number of bonded nearest neighbors.
The forces of electrical imaging strongly polarize the surface of colloidal silica. I used X-ray scattering to study the adsorbed 2-nm-thick compact layer of alkali ions at the surface of concentrated solutions of 5-nm, 7-nm, and 22-nm particles, stabilized either by NaOH or a mixture of NaOH and CsOH, with the total bulk concentration of alkali ions ranging from 0.1- to 0.7-mol/L. The observed structure of the compact layer is almost independent of the size of the particles and concentration of alkali base in the sol; it can be described by a two-layer model, i.e., an ~ 8 Angstrom thick layer…
Manufacturing new soft materials with specific optical, mechanical and magnetic properties is a significant challenge. Assembling and manipulating colloidal particles at fluid interfaces is a promising way to make such materials. We use lattice-Boltzmann simulations to investigate the response of magnetic ellipsoidal particles adsorbed at liquid-liquid interfaces to external magnetic fields. We provide further evidence for the first-order orientation phase transition predicted by Bresme and Faraudo [Journal of Physics: Condensed Matter 19 (2007), 375110]. We show that capillary interface defor…
Patchy colloids with highly directional interactions are ideal building blocks to control the local arrangements resulting from their spontaneous self-organization. Here we propose their use, combined with substrates and nonequilibrium conditions, to obtain structures, different from those of equilibrium thermodynamic phases. Specifically, we investigate numerically the irreversible adhesion of three-patch colloids near attractive substrates, and analyze the fractal network of connected particles that is formed. The network density profile exhibits three distinct regimes, with different struct…
In the present study we are performing simulation of simple model of two patch colloidal particles undergoing irreversible diffusion limited cluster aggregation using patchy Brownian cluster dynamics. In addition to the irreversible aggregation of patches, the spheres are coupled with isotropic reversible aggregation through the Kern-Frenkel potential. Due to the presence of anisotropic and isotropic potential we have also defined 3 different kinds of clusters formed due to anisotropic potential and isotropic potential only as well as both the potentials together. We have investigated the effe…
We investigate the effect of distinct bonding energies on the onset of criticality of low functionality fluid mixtures. We focus on mixtures of particles with two and three patches as this includes the mixture where 'empty' fluids were originally reported. In addition to the number of patches, the species differ in the type of patches or bonding sites. For simplicity, we consider that the patches on each species are identical: one species has 3 patches of type $A$ and the other 2 patches of type $B$. We have found a rich phase behaviour with closed miscibility gaps, liquid-liquid demixing and …
We calculate the network fluid regime and phase diagrams of binary mixtures of patchy colloids, using Wertheim's first order perturbation theory and a generalization of Flory-Stockmayer's theory of polymerization. The colloids are modelled as hard spheres with the same diameter and surface patches of the same type, $A$. The only difference between species is the number of their patches -or functionality-, $f_A^{(1)}$ and $f_A^{(2)}$ (with $f_A^{(2)}>f_A^{(1)}$). We have found that the difference in functionality is the key factor controlling the behaviour of the mixture in the network (percola…
By employing monomer-resolved computer simulations and analytical considerations based on polymer scaling theory, we analyze the conformations and interactions of multiarm star polymers strongly adsorbed on a smooth, two-dimensional plane. We find a stronger stretching of the arms as well as a stronger repulsive, effective interaction than in the three dimensional case. In particular, the star size scales with the number of arms $f$ as $\sim f^{1/4}$ and the effective interaction as $\sim f^{2}$, as opposed to $\sim f^{1/5}$ and $\sim f^{3/2}$, respectively, in three dimensions. Our results de…
We develop a new theory for associating fluids with multiple association sites. The theory accounts for small bond angle effects such as steric hindrance, ring formation and double bonding. The theory is validated against monte carlo simulations for the case of a fluid of patchy colloid particles with three patches and is found to be very accurate. Once validated, the theory is applied to study the phase diagram of a fluid composed of three patch colloids. It is found that bond angle has a significant effect on the phase diagram and the very existence of a liquid - vapor transition.
We study the critical Casimir interaction between two spherical colloids immersed in a binary liquid mixture close to its critical demixing point. The surface of each colloid prefers one species of the mixture with the exception of a circular patch of arbitrary size, where the other species is preferred. For such objects we calculate, within the Derjaguin approximation, the scaling function describing the critical Casimir potential, and we use it to derive the scaling functions for all components of the forces and torques acting on both colloids. The results are compared with available experim…
We propose a minimal model for spherical proteins with aeolotopic pair interactions to describe the equilibrium phase behavior of lysozyme. The repulsive screened Coulomb interactions between the particles are taken into account assuming that the net charges are smeared out homogeneously over the spherical protein surfaces. We incorporate attractive surface patches, with the interactions between patches on different spheres modeled by an attractive Yukawa potential. The parameters entering the attractive Yukawa potential part are determined using information on the experimentally accessed gas-…
Motivated by recent experimental findings in chemical synthesis of colloidal particles, we draw an analogy between self-assembly processes occurring in biological systems (e.g. protein folding) and a new exciting possibility in the field of material science. We consider a self-assembly process whose elementary building blocks are decorated patchy colloids of various types, that spontaneously drive the system toward a unique and predetermined targeted macroscopic structure. To this aim, we discuss a simple theoretical model -- the Kern-Frenkel model -- describing a fluid of colloidal spherical …
We report on a computer simulation and integral equation study of a simple model of patchy spheres, each of whose surfaces is decorated with two opposite attractive caps, as a function of the fraction $χ$ of covered attractive surface. The simple model explored --- the two-patch Kern-Frenkel model --- interpolates between a square-well and a hard-sphere potential on changing the coverage $χ$. We show that integral equation theory provides quantitative predictions in the entire explored region of temperatures and densities from the square-well limit $χ= 1.0$ down to $χ\approx 0.6$. For smaller …
Responsive poly-N-isopropylacrylamide-based microgels are commonly used as model colloids with soft repulsive interactions. It has been shown that the microgel-microgel interaction in solution can be easily adjusted by varying the environmental parameters, e.g., temperature, pH, or salt concentration. Furthermore, microgels readily adsorb to liquid-gas and liquid-liquid interfaces forming responsive foams and emulsions that can be broken on-demand. In this work, we explore the interactions between microgel monolayers at the air-water interface and a hard colloid in the water. Force-distance cu…
Using Brownian dynamics simulations, density functional theory, and analytical perturbation theory we study the collapse of a patch of interfacially trapped, micrometer-sized colloidal particles, driven by long-ranged capillary attraction. This attraction {is formally analogous} to two--dimensional (2D) screened Newtonian gravity with the capillary length \hatλ as the screening length. Whereas the limit \hatλ \to \infty corresponds to the global collapse of a self--gravitating fluid, for finite \hatλ we predict theoretically and observe in simulations a ringlike density peak at the outer rim o…
Low-density "equilibrium" gels that consist of a percolated, kinetically arrested network of colloidal particles and are resilient to aging can be fabricated by restricting the number of effective bonds that form between the colloids. Valence-restricted patchy particles have long served as one archetypal example of such materials, but equilibrium gels can also be realized through a synthetically simpler and scalable strategy that introduces a secondary linker, such as a small ditopic molecule, to mediate the bonds between the colloids. Here, we consider the case where the ditopic linker molecu…
We consider the Asakura-Oosawa-Vrij model of hard sphere colloids and ideal polymer coils in contact with a planar hard wall at (colloidal) liquid-gas coexistence. Using extensive numerical density functional calculations, the liquid-gas, wall-liquid and wall-gas interfacial free energies are calculated. The results are inserted into Young's equation to obtain the contact angle between the liquid-gas interface and the wall. As a function of polymer fugacity this angle exhibits discontinuities of slope (``kinks'') upon crossing first-order surface phase transitions located on the gas branch of …
We study analytically the joint dispersion of Gaussian patches of salt and colloids in linear flows, and how salt gradients accelerate or delay colloid spreading by diffusiophoretic effects. Because these flows have constant gradients in space, the problem can be solved almost entirely for any set of parameters, leading to predictions of how the mixing time and the Batchelor scale are modified by diffusiophoresis. We observe that the evolution of global concentrations, defined as the inverse of the patches areas, are very similar to those obtained experimentally in chaotic advection. They are …
Functionalizing colloids with reactive DNA linkers is a versatile way of programming self-assembly. DNA selectivity provides direct control over colloid-colloid interactions allowing the engineering of structures such as complex crystals or gels. However, self-assembly of localized and finite structures remains an open problem with many potential applications. In this work, we present a system in which functionalized surfaces initiate a cascade reaction between linkers leading to self-assembly of crystals with a controllable number of layers. Specifically, we consider colloidal particles funct…
Equilibrium gels of colloidal particles can be realized through the introduction of a second species, a linker that mediates the bonds between the colloids. A gel forming binary mixture whose linkers can self-assemble into linear chains while still promoting the aggregation of particles is considered in this work. The particles are patchy particles with $f_C$ patches of type $C$ and the linkers are patchy particles with $2$ patches of type $A$ and $f_B$ patches of type B. The bonds between patches of type $A$ ($AA$ bonds) promote the formation of linear chains of linkers. Two different ways (m…
The specificity and thermal reversibility of DNA interactions have enabled the self-assembly of crystal structures, self-replicating materials and colloidal molecules. Grafting DNA onto liquid interfaces of emulsions leads to exciting new architectural possibilities due to the mobility of the DNA ligands and the patches they form between bound droplets. Here we show that the size and number of these adhesion patches (valency) can be controlled. Valence 2 leads to flexible polymers of emulsion droplets, while valence above 4 leads to rigid droplet networks. A simple thermodynamic model quantita…
We study the effective interaction between differently charged polyelectrolyte-colloid complexes in electrolyte solutions via Monte Carlo simulations. These complexes are formed when short and flexible polyelectrolyte chains adsorb onto oppositely charged colloidal spheres, dispersed in an electrolyte solution. In our simulations the bending energy between adjacent monomers is small compared to the electrostatic energy, and the chains, once adsorbed, do not exchange with the solution, although they rearrange on the particles surface to accomodate further adsorbing chains or due to the electros…
Strong effects of the Faraday instability on suspensions of rodlike colloidal particles are reported through measurements of the critical acceleration and of the surface wave amplitude. We show that the transition to parametrically excited surface waves displays discontinuous and hysteretic features. This subcritical behaviour is attributed to the shear-thinning properties of our colloidal suspensions thanks to a phenomenological model based on rheological data under large amplitude oscillatory shear. Birefringence measurements provide direct evidence that Faraday waves induce local nematic or…
A class of binary mixtures of Janus fluids formed by colloidal spheres with the hydrophobic hemispheres constrained to point either up or down are studied by means of Gibbs ensemble Monte Carlo simulations and simple analytical approximations. These fluids can be experimentally realized by the application of an external static electrical field. The gas-liquid and demixing phase transitions in five specific models with different patch-patch affinities are analyzed. It is found that a gas-liquid transition is present in all the models, even if only one of the four possible patch-patch interactio…
