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arXiv 1403.2658q-bio.OT
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使用超复数表示的DNA序列的成对比对

Pairwise alignment of the DNA sequence using hypercomplex number representation

Jian-Jun Shu, Li Shan Ouw

摘要:

为了充分考虑每个核苷酸的概率,引入了一组新的DNA碱基-核酸编码及其超复数表示。本文提出了一种新的评分系统,以适应DNA碱基-核酸编码的超复数表示,并结合点阵分析法和各种序列比对算法。DNA序列比对的问题可以以与蛋白质序列的成对比对相当类似的方式处理。

英文摘要:

A new set of DNA base-nucleic acid codes and their hypercomplex number representation have been introduced for taking the probability of each nucleotide into full account. A new scoring system has been proposed to suit the hypercomplex number representation of the DNA base-nucleic acid codes and incorporated with the method of dot matrix analysis and various algorithms of sequence alignment. The problem of DNA sequence alignment can be processed in a rather similar way as pairwise alignment of protein sequence.

机构、总结、中文摘要均由AI分析而来,可能存在错误,请以论文正文为准。

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