We present an analysis of the Ly-a forest toward 3C 273 from the Space Telescope Imaging Spectrograph at ~7 km/s resolution, along with re-processed data from the Far Ultraviolet Spectroscopic Explorer. The high UV flux of 3C 273 allows us to probe the weak, low z absorbers. The main sample consists of 21 HI absorbers that we could discriminate to a sensitivity of log NHI~ 12.5. The redshift density for absorbers with 13.1<log NHI<14.0 is ~1.5 sigma below the mean for other lines of sight; for log NHI >= 12.5, it is consistent with numerical model predictions. The Doppler parameter distribution is consistent with other low z samples. We find no evidence for a break in the column density power-law distribution to log NHI=12.3. A broad Ly-a absorber (BLA) is within Delta v =< 50 km/s and 1.3 local frame Mpc of two ~0.5L* galaxies, with an OVI absorber ~700 km/s away, similarly close to three galaxies and indicating overdense environments. We detect clustering on the Delta v<1000 km/s scale at 3.4 sigma significance for log NHI >= 12.6, consistent with the level predicted from hydrodynamical simulations, and indication for a Ly-a forest void at 0.09<z<0.12. We find at least two components for the z=0.0053 Virgo absorber, but the total NHI column is not significantly changed.
The Lyman-alpha forest is the large-scale structure probe for which we appear to have modeling control to the highest wavenumbers. This makes the Lyman-alpha forest of great interest for constraining the warmness/fuzziness of dark matter and the timing of reionization processes. However, the standard statistic, the Lyman-alpha forest power spectrum, is unable to strongly constrain the IGM temperature-density relation, and this inability further limits how well other high wavenumber-sensitive parameters can be constrained. With the aim of breaking these degeneracies, we measure the power spectr…
We present the first detection of a correlation between the Lyman-$α$ forest and cosmic microwave background (CMB) lensing. For each Lyman-$α$ forest in SDSS-III/BOSS DR12, we correlate the one-dimensional power spectrum with the CMB lensing convergence on the same line of sight from Planck. This measurement constitutes a position-dependent power spectrum, or a squeezed bispectrum, and quantifies the non-linear response of the Lyman-$α$ forest power spectrum to a large-scale overdensity. The signal is measured at 5~$σ$ and is consistent with the $Λ$CDM expectation. We measure the linear bias o…
The Lyman-alpha forest is a unique probe of large-scale matter density fluctuations at high redshift (z > 2). It is possible to obtain 3D maps of the matter distribution from Lyman-alpha data, using tomographic reconstruction methods. Here, we present the largest tomographic map of matter fluctuations at z > 2, over the Gpc^3 volume covered by Lyman-alpha forest from SDSS-IV quasar spectra in the Stripe 82 field. We present a catalog of high-redshift voids constructed from this map. The measurement of the cross-correlation between these voids and the Lyman-alpha forest provides the first obser…
We demonstrate that the Lyman alpha emission in the absorption troughs of a large sample of stacked damped Lyman alpha absorption systems (DLAS) presented by Rahmani et al (2010) is consistent with the spectral profiles and luminosities of a recently detected population of faint Lyman alpha emitters at z ~ 3. This result supports the suggestion that the faint emitters are to be identified with the host galaxies of DLAS at these redshifts.
We quantify the impact of massive neutrinos on the statistics of low density regions in the intergalactic medium (IGM) as probed by the Lyman-alpha forest at redshifts z=2.2--4. Based on mock but realistic quasar (QSO) spectra extracted from hydrodynamic simulations with cold dark matter, baryons and neutrinos, we find that the probability distribution of weak Lyman-alpha absorption features, as sampled by Lyman-alpha flux regions at high transmissivity, is strongly affected by the presence of massive neutrinos. We show that systematic errors affecting the Lyman-alpha forest reduce but do not …
Continuum fitting is an important aspect of Lyman-alpha forest science, since errors in the estimated optical depths scale with the fractional continuum error. However, traditional methods of estimating continua in noisy and moderate-resolution spectra (S/N < 10 pixel^-1 and R ~ 2000, respectively, such as SDSS) using power-law extrapolation or the mean spectrum, achieve no better than ~ 10-15% RMS accuracy. To improve on this, we introduce mean-flux regulated/principal component analysis (MF-PCA) continuum fitting. In this technique, PCA fitting is carried out redwards of the quasar Lyman-alp…
In this work we extend our recently developed multi-fidelity emulation technique to the simulated Lyman-$α$ forest flux power spectrum. Multi-fidelity emulation allows interpolation of simulation outputs between cosmological parameters using many cheap low-fidelity simulations and a few expensive high-fidelity simulations. Using a test suite of small box (30 Mpc/h) simulations, we show that multi-fidelity emulation is able to reproduce the Lyman-$α$ forest flux power spectrum well, achieving an average accuracy when compared to a test suite of $0.8\%$. We further show that it has a substantial…
The post-reionization thermal state of the intergalactic medium is characterized by a power-law relationship between temperature and density, with a slope determined by the parameter $γ$. We describe a new method to measure $γ$ using the ratio of flux curvature in the Lyman-$α$ and $β$ forests. At a given redshift, this curvature ratio incorporates information from the different gas densities traced by Lyman-$α$ and $β$ absorption. It is relatively simple and fast to compute and appears robust against several observational uncertainties. We apply this technique to a sample of 27 high-resolutio…
The angular positions of quasars are deflected by the gravitational lensing effect of foreground matter. The Lyman-alpha forest seen in the spectra of these quasars is therefore also lensed. We propose that the signature of weak gravitational lensing of the forest could be measured using similar techniques that have been applied to the lensed Cosmic Microwave Background, and which have also been proposed for application to spectral data from 21cm radio telescopes. As with 21cm data, the forest has the advantage of spectral information, potentially yielding many lensed "slices" at different red…
We provide an analytical description of the line broadening of HI absorbers in the Lyman-alpha forest resulting from Doppler broadening and Jeans smoothing. We demonstrate that our relation captures the dependence of the line-width on column density for narrow lines in z~3 mock spectra remarkably well. Broad lines at a given column density arise when the underlying density structure is more complex, and such clustering is not captured by our model. Our understanding of the line broadening opens the way to a new method to characterise the thermal state of the intergalactic medium and to determi…
We present the first measurement of the large-scale cross-correlation of Lyman alpha forest absorption and Damped Lyman alpha systems (DLA), using the 9th Data Release of the Baryon Oscillation Spectroscopic Survey (BOSS). The cross-correlation is clearly detected on scales up to 40 Mpc/h and is well fitted by the linear theory prediction of the standard Cold Dark Matter model of structure formation with the expected redshift distortions, confirming its origin in the gravitational evolution of structure. The amplitude of the DLA-Lyman alpha cross-correlation depends on only one free parameter,…
We investigate the correlations between the observed fraction of Lyman alpha emission from star-forming galaxies and the large scale structure by post-processing snapshots of a large, high resolution hydrodynamical simulation with a Lyman alpha radiative transfer code at redshifts z=4, 3, 2. We find correlations of the observed fraction with density, density gradient along the line of sight, velocity and velocity gradient along the line of sight, all within the same order of magnitude (tens of percent). Additionally, a correlation with the angular momentum of the dark matter halo is detected. …
We present the first Lyman Alpha Emitter (LAE) study that combines: (i) cosmological SPH simulations run using GADGET-2, (ii) radiative transfer simulations (CRASH), and (iii) a previously developed LAE model. This complete LAE model accounts for the intrinsic LAE Lyman Alpha/continuum luminosity, dust enrichment and Lyman Alpha transmission through the intergalactic medium (IGM), to quantify the effects of reionization, dust and velocity fields on the Lyman Alpha and UV Luminosity Functions (LF). We find that a model neglecting dust sorely fails to reproduce either the slope or the magnitude …
Large surveys for Lyman-alpha emitting (LAE) galaxies have been proposed as a new method for measuring clustering of the galaxy population at high redshift with the goal of determining cosmological parameters. However, Lyman-alpha radiative transfer effects may modify the observed clustering of LAE galaxies in a way that mimics gravitational effects, potentially reducing the precision of cosmological constraints. For example, the effect of the linear redshift-space distortion on the power spectrum of LAE galaxies is potentially degenerate with Lyman-alpha radiative transfer effects owing to th…
We present new simulations of the flux power spectrum of the Lyman $α$ forest as a means to investigate the effects of time-dependent dark energy on structure formation. We use a linearized parameterization of the time-dependence of the dark energy equation of state and sample the parameters ($w_0,w_a$) from the the extrema of the allowed observational values as determined by the Planck results. Each chosen ($w_0,w_a$) pair is then used in a high-resolution, large-scale cosmological simulation run with a modified version of the publicly available SPH code {\tt GADGET-2}. From each of these sim…
The Lyman-alpha (Lya) recombination line is a fundamental tool for galaxy evolution studies and modern observational cosmology. However, subsequent interpretations are still prone to a number of uncertainties. Besides numerical efforts, empirical data are urgently needed for a better understanding of Lya escape process. We empirically estimate the Lyman-alpha escape fraction fesc(Lya) in a statistically significant sample of z ~ 0 - 0.3 galaxies in order to calibrate high-redshift Lyman-alpha observations. An optical spectroscopic follow-up of a sub-sample of 24 Lyman-alpha emitters (LAEs) det…
Detection of primordial non-Gaussianity will give us an unprecedented detail of the physics of inflation. As observational probes are now exploring new expanses of the inflationary landscape, it is crucial to distinguish and disentangle effects of various non-Gaussianities beyond f_NL. In this work, we calculate the effects of non-Gaussianities parametrized by f_NL and the cubic-order g_NL, on the Lyman-alpha-forest flux measurements. We give the expressions of the bias due to f_NL and g_NL, which can be deduced from accurate measurements of the transmitted flux. We show how these two effects …
We use very large cosmological Smoothed-Particle-Hydrodynamics simulations to study the properties of high redshift Lyman-alpha emitters (LAEs). We identify star-forming galaxies at z=3.1 in a cosmological volume of 100 h^-1Mpc on a side. We develop a phenomenological model of absorption, scattering and escape of Lyman-alpha photons on the assumption that the clumpiness of the inter-stellar medium in a galaxy is correlated with the larger scale substructure richness. The radiative transfer effect proposed by Neufeld (1991) allows a large fraction of Lyman-alpha photons to escape from a clumpy …
The squeezed-limit bispectrum, which is generated by nonlinear gravitational evolution as well as inflationary physics, measures the correlation of three wavenumbers, in the configuration where one wavenumber is much smaller than the other two. Since the squeezed-limit bispectrum encodes the impact of a large-scale fluctuation on the small-scale power spectrum, it can be understood as how the small-scale power spectrum "responds" to the large-scale fluctuation. Viewed in this way, the squeezed-limit bispectrum can be calculated using the response approach even in the cases which do not submit …
The amplitude of the metagalactic ultraviolet background (UVB) at large-scales is impacted by two factors. First, it naturally attenuates at scales larger than mean-free-path of UVB photons due to the absorption by neutral intergalactic medium. Second, there are discrete and rare ionizing sources distributing in the Universe, emitting the UVB photons, and thus enhancing the local UVB amplitude. Therefore, for cosmological probe that is sensitive to the UVB amplitude and capable of detecting the large scale like Lyman-$α$ forest spectrum, the fluctuation due to the clustering of ionizing source…
The 21-cm and Lyman Alpha lines are the dominant line-emission spectral features at opposite ends of the spectrum of hydrogen. Each line can be used to create three dimensional intensity maps of large scale structure. The sky brightness at low redshift due to Lyman Alpha emission is estimated to be 0.4 Jy/Steradian, which is brighter than the zodiacal light foreground.
The baryon-acoustic oscillation (BAO) feature in the Lyman-$α$ forest is one of the key probes of the cosmic expansion rate at redshifts z~2.5, well before dark energy is believed to have become dynamically significant. A key advantage of the BAO as a standard ruler is that it is a sharp feature and hence is more robust against broadband systematic effects than other cosmological probes. However, if the Lyman-$α$ forest transmission is sensitive to the initial streaming velocity of the baryons relative to the dark matter, then the BAO peak position can be shifted. Here we investigate this sens…
We measure the large-scale cross-correlation of quasars with the Lyman α forest absorption in redshift space, using ~ 60000 quasar spectra from Data Release 9 (DR9) of the Baryon Oscillation Spectroscopic Survey (BOSS). The cross-correlation is detected over a wide range of scales, up to comoving separations r of 80 Mpc/h. For r > 15 Mpc/h, we show that the cross-correlation is well fitted by the linear theory prediction for the mean overdensity around a quasar host halo in the standard ΛCDM model, with the redshift distortions indicative of gravitational evolution detected at high confidence.…
We study and compare fitting methods for the Lyman-$α$ (Ly$α$) forest 3D correlation function. We use the nested sampler PolyChord and the community code picca to perform a Bayesian analysis which we compare with previous frequentist analyses. By studying synthetic correlation functions, we find that the frequentist profile likelihood produces results in good agreement with a full Bayesian analysis. On the other hand, Maximum Likelihood Estimation with the Gaussian approximation for the uncertainties is inadequate for current data sets. We compute for the first time the full posterior distribu…
We have proposed a method for measuring weak lensing using the Lyman-alpha forest. Here we estimate the noise expected in weak lensing maps and power spectra for different sets of observational parameters. We find that surveys of the size and quality of the ones being done today and ones planned for the future will be able to measure the lensing power spectrum at a source redshift of z~2.5 with high precision and even be able to image the distribution of foreground matter with high fidelity on degree scales. For example, we predict that Lyman-alpha forest lensing measurement from the Dark Ener…
Lyman-alpha emitting galaxies can be used to study cosmological reionization, because a neutral intergalactic medium scatters Lyman-alpha photons into diffuse halos whose surface brightness falls below typical survey detection limits. Here we present the Lyman-alpha emitting galaxy LAE J095950.99+021219.1, identified at redshift z=6.944 in the COSMOS field using narrowband imaging and followup spectroscopy with the IMACS instrument on the Magellan I Baade telescope. With a single object spectroscopically confirmed so far, our survey remains consistent with a wide range of IGM neutral fraction …
We use hydrodynamic cosmological simulations in a (600 Mpc)^3 volume to study the observability of baryon acoustic oscillations (BAO) in the intergalactic medium as probed by Lyman alpha forest (LAF) absorption. The large scale separation between the wavelength of the BAO mode (~150 Mpc) and the size of LAF absorbers (~100 kpc) makes this a numerically challenging problem. We report on several 2048^3 simulations of the LAF using the ENZO code. We adopt WMAP5 concordance cosmological parameters and power spectrum including BAO perturbations. 5000 synthetic HI absorption line spectra are generat…
We present a semi-analytical model of star formation which explains simultaneously the observed UV luminosity function of high redshift Lyman break galaxies (LBGs) and luminosity functions of Lyman-alpha emitters. We consider both models that use the Press-Schechter (PS) and Sheth-Tormen (ST) halo mass functions to calculate the abundances of dark matter halos. The Lyman-alpha luminosity functions at z < 4 are well reproduced with only <10% of the LBGs emitting Lyman-alpha lines with rest equivalent width greater than the limiting equivalent width of the narrow band surveys. However, the obser…
In this work, we analyze the Lyman-$α$ forest in cosmological hydrodynamical simulations of chameleon-type f(R) gravity with the goal to assess whether the impact of such models is detectable in absorption line statistics. We carry out a set of hydrodynamical simulations with the cosmological simulation code MG-GADGET, including star formation and cooling effects, and create synthetic Lyman-$α$ absorption spectra from the simulation outputs. We statistically compare simulations with f(R) and ordinary general relativity, focusing on flux probability distribution functions (PDFs) and flux power-…
We show that populations of high redshift galaxies grow more luminous as they grow in linear size. This is because the brightness per unit area has a distinct upper limit due to the self-regulating nature of star-formation. As a corollary, we show that the observed increase in characteristic luminosity of Lyman Break Galaxies (L*) with time can be explained by their increase in size, which scales as 1/H(z). In contrast, Lyman-alpha selected galaxies have a characteristic, constant, small size between redshift z=2.25 and 6.5. Coupled with a characteristic surface brightness, this can explain th…
We present long-slit spectroscopic data which reveals extended Lyman alpha emission around the z=6.417 radio-quiet quasar CFHQS J2329-0301. The Lyman alpha emission is extended over 15 kpc and has a luminosity of > 8 x 10^36 W, comparable to the most luminous Lyman alpha halos known. The emission has complex kinematics, in part due to foreground absorption which only partly covers the extended nebula. The velocity ranges from -500 km/s to +500 km/s, with a peak remarkably close to the systemic velocity identified by broad MgII emission of the quasar. There is no evidence for infall or outflow …
We measure the effect of high column density absorbing systems of neutral hydrogen (HI) on the one-dimensional (1D) Lyman-alpha forest flux power spectrum using cosmological hydrodynamical simulations from the Illustris project. High column density absorbers (which we define to be those with HI column densities $N(\mathrm{HI}) > 1.6 \times 10^{17}\,\mathrm{atoms}\,\mathrm{cm}^{-2}$) cause broadened absorption lines with characteristic damping wings. These damping wings bias the 1D Lyman-alpha forest flux power spectrum by causing absorption in quasar spectra away from the location of the absor…
In Lyman-alpha forest measurements it is generally assumed that quasars are mere background light sources which are uncorrelated with the forest. Gravitational lensing of the quasars violates this assumption. This effect leads to a measurement bias, but more interestingly it provides a valuable signal. The lensing signal can be extracted by correlating quasar magnitudes with the flux power spectrum and with the flux decrement. These correlations will be challenging to measure but their detection provides a direct measure of how features in the Lyman-alpha forest trace the underlying mass densi…
We compare the observed probability distribution function of the transmission in the \HI\ Lyman-alpha forest, measured from the UVES 'Large Programme' sample at redshifts z=[2,2.5,3], to results from the GIMIC cosmological simulations. Our measured values for the mean transmission and its PDF are in good agreement with published results. Errors on statistics measured from high-resolution data are typically estimated using bootstrap or jack-knife resampling techniques after splitting the spectra into chunks. We demonstrate that these methods tend to underestimate the sample variance unless the …
We present theoretical results for the expected fraction of Lyman Break Galaxies (LBGs) to be detected as strong Lyman alpha emitters (LAEs) in the redshift range 5 < z < 7. We base our analysis on the 2-billion particle SPH simulation MareNostrum High-z Universe. We approximate galaxies as static dusty slabs with an additional clumpy dust distribution affecting stellar populations younger than 25 Myr. The model for the Lyman alpha escape fraction is based on the results of our Monte-Carlo radiative transfer code (CLARA) for a slab configuration. We also fix the transmission of Lyman alpha pho…
Recent theoretical work has suggested that Lyman-alpha nebulae could be substantially polarized in the Lyman-alpha emission line, depending on the geometry, kinematics, and powering mechanism at work. Polarization observations can therefore provide a useful constraint on the source of ionization in these systems. In this Letter, we present the first Lyman-alpha polarization measurements for a giant Lyman-alpha nebula at z~2.656. We do not detect any significant linear polarization of the Lyman-alpha emission: P_{Lyman-alpha}=2.6+/-2.8% (corrected for statistical bias) within a single large ape…
We present the first dynamical mass measurements for Lyman alpha galaxies at high redshift, based on velocity dispersion measurements from rest-frame optical emission lines and size measurements from HST imaging, for a sample of nine galaxies drawn from four surveys. These measurements enable us to study the nature of Lyman alpha galaxies in the context of galaxy scaling relations. The resulting dynamical masses range from 1e9 to 1e10 solar masses. We also fit stellar population models to our sample, and use them to plot the Lyman alpha sample on a stellar mass vs. line width relation. Overall…
The hydrogen Ly$α$ forest is an important probe of the $z>2$ Universe that is otherwise challenging to observe with galaxy redshift surveys, but this technique has traditionally been limited to 1D studies in front of bright quasars. However, by pushing to faint magnitudes ($g>23$) with 8-10m large telescopes it becomes possible to exploit the high area density of high-redshift star-forming galaxies to create 3D tomographic maps of large-scale structure in the foreground. I describe the first pilot observations using this technique, as well discuss future surveys and the resulting science possi…
We investigate the possibility of using the cross-correlation of the Lyman-alpha forest and redshifted 21-cm emission to detect the baryon acoustic oscillation (BAO). The standard Fisher matrix formalism is used to determine the accuracy with which it will be possible to measure cosmological distances using this signal. Earlier predictions indicate that it will be possible to measure the dilation factor D_V with 1.9 % accuracy at z=2.5 from the BOSS Lyman-alpha forest auto-correlation. In this paper we investigate if it is possible to improve the accuracy using the cross-correlation. We use a …
Current analyses of the Lyman-alpha forest assume that the primordial power spectrum of density perturbations obeys a simple power law, a strong theoretical assumption which should be tested. Employing a large suite of numerical simulations which drop this assumption, we reconstruct the shape of the primordial power spectrum using Lyman-alpha data from the Sloan Digital Sky Survey (SDSS). Our method combines a minimally parametric framework with cross-validation, a technique used to avoid over-fitting the data. Future work will involve predictions for the upcoming Baryon Oscillation Sky Survey…
Cosmological hydrodynamic simulations can accurately predict the properties of the intergalactic medium (IGM), but only under the condition of retaining high spatial resolution necessary to resolve density fluctuations in the IGM. This resolution constraint prohibits simulating large volumes, such as those probed by BOSS and future surveys, like DESI and 4MOST. To overcome this limitation, we present Iteratively Matched Statistics (IMS), a novel method to accurately model the Lyman-alpha forest with collisionless N-body simulations, where the relevant density fluctuations are unresolved. We us…
Massive spectroscopic surveys of high-redshift quasars yield large numbers of correlated Lyman α absorption spectra that can be used to measure large-scale structure. Simulations of these surveys are required to accurately interpret the measurements of correlations and correct for systematic errors. An efficient method to generate mock realizations of Lyman α forest surveys is presented which generates a field over the lines of sight to the survey sources only, instead of having to generate it over the entire three-dimensional volume of the survey. The method can be calibrated to reproduce the…
Maps of the large-scale structure of the Universe at redshifts 2-4 can be made with the Lyman-alpha forest which are complementary to low redshift galaxy surveys. We apply the Wiener interpolation method of Caucci et al. to construct three-dimensional maps from sets of Lyman-alpha forest spectra taken from cosmological hydrodynamic simulations. We mimic some current and future quasar redshift surveys (BOSS, eBOSS and MS-DESI) by choosing similar sightline densities. We use these appropriate subsets of the Lyman-alpha absorption sightlines to reconstruct the full three dimensional Lyman-alpha f…
We present an analysis of the evolution of the Lyman-series forest into the epoch of reionization using cosmological radiative transfer simulations in a scenario where reionization ends late. We explore models with different midpoints of reionization and gas temperatures. We find that once the simulations have been calibrated to match the mean flux of the observed Lyman-$α$ forest at $4 < z < 6$, they also naturally reproduce the distribution of effective optical depths of the Lyman-$β$ forest in this redshift range. We note that the tail of the largest optical depths that is most challenging …
In recent years, the autocorrelation of the hydrogen Lyman-α forest has been used to observe the baryon acoustic peak at redshift 2 < z < 3.5 using tens of thousands of QSO spectra from the BOSS survey. However, the interstellar medium of the Milky-Way introduces absorption lines into the spectrum of any extragalactic source. These lines, while weak and undetectable in a single BOSS spectrum, could potentially bias the cosmological signal. In order to examine this, we generate absorption line maps by stacking over a million spectra of galaxies and QSOs. We find that the systematics introduced …
We present the highest redshift detections of resolved Lyman alpha emission, using Hubble Space Telescope/ACS F658N narrowband-imaging data taken in parallel with the Wide Field Camera 3 Early Release Science program in the GOODS CDF-S. We detect Lyman alpha emission from three spectroscopically confirmed z = 4.4 Lyman alpha emitting galaxies (LAEs), more than doubling the sample of LAEs with resolved Lyman alpha emission. Comparing the light distribution between the rest-frame ultraviolet continuum and narrowband images, we investigate the escape of Lyman alpha photons at high redshift. While…
We present a theoretical estimate for a new observable: the cross-correlation between the Lyman-alpha flux fluctuations in quasar (QSO) spectra and the convergence of the cosmic microwave background (CMB) as measured along the same line-of-sight. As a first step toward the assessment of its detectability, we estimate the signal-to-noise ratio using linear theory. Although the signal-to-noise is small for a single line-of-sight and peaks at somewhat smaller redshifts than those probed by the Lyman-alpha forest, we estimate a total signal-to-noise of 9 for cross-correlating QSO spectra of SDSS-I…
We present the first simulation of the signature of baryonic acoustic oscillations (BAO) in Lyman alpha forest data containing 180,000 mock quasar sight-lines. We use eight large dark-matter only simulations onto which we paint the Lyman alpha field using the fluctuating Gunn-Peterson approximation. We argue that this approach should be sufficient for the mean signature on the scales of interest. Our results indicate that Lyman alpha flux provides a good tracer of the underlying dark matter field on large scales and that redshift space distortions are well described by a simple linear theory p…
Current results from the Lyman alpha forest assume that the primordial power spectrum of density perturbations follows a simple power law form, with running. We present the first analysis of Lyman alpha data to study the effect of relaxing this strong assumption on primordial and astrophysical constraints. We perform a large suite of numerical simulations, using them to calibrate a minimally parametric framework for describing the power spectrum. Combined with cross-validation, a statistical technique which prevents over-fitting of the data, this framework allows us to reconstruct the power sp…
The formation of the first galaxies is accompanied by large accretion flows and virialization shocks, during which the gas is shock-heated to temperatures of $\sim10^4$ K, leading to potentially strong fluxes in the Lyman alpha line. Indeed, a number of Lyman alpha blobs has been detected at high redshift. In this letter, we explore the origin of such Lyman alpha emission using cosmological hydrodynamical simulations that include a detailed model of atomic hydrogen as a multi-level atom and the effects of line trapping with the adaptive mesh refinement code FLASH. We see that baryons fall into…
We present NICMOS J110 (rest-frame 1200-2100 A) observations of the three z=5.7 Lyman Alpha emitters discovered in the blind multislit spectroscopic survey by Martin et al. (2008). These images confirm the presence of the two sources which were previously only seen in spectroscopic observations. The third source, which is undetected in our J110 observations has been detected in narrowband imaging of the Cosmic Origins Survey (COSMOS), so our nondetection implies a rest frame equivalent width >146 Angstroms (3 sigma). The two J110-- detected sources have more modest rest frame equivalent widths…
The sources which reionized the Intergalactic Medium by redshift ~6 are still unknown. A severe constraint on the ionization process is the low emissivity required to maintain the ionization in the Lyman-α forest. Simulation-calibrated observations suggest a production rate of at most only a few photons per baryon. In this work, we present a new solution to this "photon-starvation" problem using a weak background of cosmic magnetic fields, which may be present as a consequence of early-Universe physics and subsequent magneto-hydrodynamical amplification. If present, such magnetic fields can in…
We present methods for interpolating between the 1-D flux power spectrum of the Lyman-$α$ forest, as output by cosmological hydrodynamic simulations. Interpolation is necessary for cosmological parameter estimation due to the limited number of simulations possible. We construct an emulator for the Lyman-$α$ forest flux power spectrum from $21$ small simulations using Latin hypercube sampling and Gaussian process interpolation. We show that this emulator has a typical accuracy of 1.5% and a worst-case accuracy of 4%, which compares well to the current statistical error of 3 - 5% at $z < 3$ from…
Using stacks of Ly-a images of 2128 Ly-a emitters (LAEs) and 24 protocluster UV-selected galaxies (LBGs) at z=3.1, we examine the surface brightness profiles of Ly-a haloes around high-z galaxies as a function of environment and UV luminosity. We find that the slopes of the Ly-a radial profiles become flatter as the Mpc-scale LAE surface densities increase, but they are almost independent of the central UV luminosities. The characteristic exponential scale lengths of the Ly-a haloes appear to be proportional to the square of the LAE surface densities (r(Lya) \propto Sigma(LAE)^2). Including th…
